RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 SYPL2Q5VXT5 272 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 TTC33Q6PID6 262 aaPredicted RBP20.73■□□□□ 0.91
SPNS1-203ENST00000334536 TMEM135Q86UB9 458 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 MFSD2AQ8NA29 543 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 RASSF5Q8WWW0 418 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 PGAP3Q96FM1 320 aaPredicted RBP20.73■□□□□ 0.91
SPNS1-203ENST00000334536 MS4A4AQ96JQ5 239 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 FCRL3Q96P31 734 aaPredicted RBP20.73■□□□□ 0.91
SPNS1-203ENST00000334536 SORT1Q99523 831 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 MED10Q9BTT4 135 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 CEP41Q9BYV8 373 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 GOLGA2P5Q9HBQ8 144 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 TMPRSS4Q9NRS4 437 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 SNX15Q9NRS6 342 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 SACM1LQ9NTJ5 587 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 TRAF6Q9Y4K3 522 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 IPPQ9Y573 584 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 ANGPTL3Q9Y5C1 460 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 PCDHGA11Q9Y5H2 935 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 SYNJ2BP-COX16A0A087WUM0 186 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 CLDN5O00501 218 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 SCO2O43819 266 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 MTRF1O75570 445 aaKnown RBP20.73■□□□□ 0.91
SPNS1-203ENST00000334536 MAP4P27816 1152 aaKnown RBP20.73■□□□□ 0.91
SPNS1-203ENST00000334536 NPY2RP49146 381 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 NDUFV1P49821 464 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 TKTL1P51854 596 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 GET4Q7L5D6 327 aaPredicted RBP20.73■□□□□ 0.91
SPNS1-203ENST00000334536 DCLK2Q8N568 766 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 FAM47BQ8NA70 645 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 OR52K1Q8NGK4 314 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 RAB2BQ8WUD1 216 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 STON2Q8WXE9 905 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 PIH1D1Q9NWS0 290 aaKnown RBP20.73■□□□□ 0.91
SPNS1-203ENST00000334536 COX16Q9P0S2 106 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 FBXW11Q9UKB1 542 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 VANGL2Q9ULK5 521 aa20.73■□□□□ 0.91
SPNS1-203ENST00000334536 H2AFYO75367 372 aaKnown RBP20.72■□□□□ 0.91
SPNS1-203ENST00000334536 BEST1O76090 585 aa20.72■□□□□ 0.91
SPNS1-203ENST00000334536 CRYBB1P53674 252 aaPredicted RBP20.72■□□□□ 0.91
SPNS1-203ENST00000334536 TPI1P60174 286 aa20.72■□□□□ 0.91
SPNS1-203ENST00000334536 HERC3Q15034 1050 aa20.72■□□□□ 0.91
SPNS1-203ENST00000334536 PUS10Q3MIT2 529 aaKnown RBP20.72■□□□□ 0.91
SPNS1-203ENST00000334536 PPM1LQ5SGD2 360 aa20.72■□□□□ 0.91
SPNS1-203ENST00000334536 TMCO5AQ8N6Q1 288 aa20.72■□□□□ 0.91
SPNS1-203ENST00000334536 RP9Q8TA86 221 aaKnown RBP20.72■□□□□ 0.91
SPNS1-203ENST00000334536 TMEM40Q8WWA1 233 aa20.72■□□□□ 0.91
SPNS1-203ENST00000334536 VAT1Q99536 393 aa20.72■□□□□ 0.91
SPNS1-203ENST00000334536 NANOGQ9H9S0 305 aa20.72■□□□□ 0.91
SPNS1-203ENST00000334536 C8orf4Q9NR00 106 aa20.72■□□□□ 0.91
SPNS1-203ENST00000334536 TMA7Q9Y2S6 64 aaKnown RBP20.72■□□□□ 0.91
SPNS1-203ENST00000334536 PCDHB12Q9Y5F1 795 aa20.72■□□□□ 0.91
SPNS1-203ENST00000334536 TLL2Q9Y6L7 1015 aa20.72■□□□□ 0.91
SPNS1-203ENST00000334536 CCL15-CCL14A0A0B4J2E2 113 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 GOLGA8QA0A0J9YX86 632 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 C1orf232A0A0U1RR37 186 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 GOLGA8OA6NCC3 632 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 GOLGA8NF8WBI6 632 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 AP3B1O00203 1094 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 ACOT8O14734 319 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 TEX28O15482 410 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 AKAP10O43572 662 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 CPNE6O95741 557 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 C7P10643 843 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 MYCLP1P12525 358 aaPredicted RBP20.71■□□□□ 0.91
SPNS1-203ENST00000334536 CYP2B6P20813 491 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 HPCAL1P37235 193 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 TPTEP56180 551 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 DAOAP59103 153 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 GNA12Q03113 381 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 OCA2Q04671 838 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 CDC20Q12834 499 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 TRAF2Q12933 501 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 PMS2P3Q13401 168 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 NRF1Q16656 503 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 CCL15Q16663 113 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 PPM1JQ5JR12 505 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 WSCD1Q658N2 575 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 KCTD11Q693B1 232 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 KIAA1841Q6NSI8 718 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 PRR23CQ6ZRP0 262 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 TMEM26Q6ZUK4 368 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 ESX1Q8N693 406 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 EFCAB3Q8N7B9 438 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 GOLM1Q8NBJ4 401 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 SMG8Q8ND04 991 aaKnown RBP20.71■□□□□ 0.91
SPNS1-203ENST00000334536 SLC7A14Q8TBB6 771 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 ATL1Q8WXF7 558 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 ZNF669Q96BR6 464 aaPredicted RBP20.71■□□□□ 0.91
SPNS1-203ENST00000334536 MARCH7Q9H992 704 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 WDR6Q9NNW5 1121 aaKnown RBP20.71■□□□□ 0.91
SPNS1-203ENST00000334536 PNPOQ9NVS9 261 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 CDY2AQ9Y6F7 541 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 CDY1Q9Y6F8 540 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 RGSL1A5PLK6 1076 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 TMX2-CTNND1H3BSU7 103 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 ZNF195O14628 629 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 FYNP06241 537 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 HADHAP40939 763 aa20.71■□□□□ 0.91
SPNS1-203ENST00000334536 PSEN2P49810 448 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms