RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 FOXO4P98177 505 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 C17orf75Q9HAS0 396 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 GAKO14976 1311 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 ZNF705EA8MWA4 302 aaPredicted RBP8.77□□□□□ -1.01
USF3-201ENST00000316407 NOBOXO60393 691 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 RB1P06400 928 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 FESP07332 822 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 TAL1P17542 331 aaPredicted RBP8.77□□□□□ -1.01
USF3-201ENST00000316407 SEMA5AQ13591 1074 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 CBWD6Q4V339 395 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 LRTOMTQ8WZ04 291 aa8.77□□□□□ -1.01
USF3-201ENST00000316407 SAV1Q9H4B6 383 aaPredicted RBP8.77□□□□□ -1.01
USF3-201ENST00000316407 C9IYK1 514 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 POLR2EP19388 210 aaKnown RBP8.76□□□□□ -1.01
USF3-201ENST00000316407 PSMA1P25786 263 aaKnown RBP8.76□□□□□ -1.01
USF3-201ENST00000316407 GJA9P57773 515 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 TAS2R41P59536 307 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 TIGD2Q4W5G0 525 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 ANKRD23Q86SG2 305 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 DLG5Q8TDM6 1919 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 TREM1Q9NP99 234 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 TMEM150BA6NC51 233 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 SLC6A2P23975 617 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 ICAM3P32942 547 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 RHOAP61586 193 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 DOK6Q6PKX4 331 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 ZNF517Q6ZMY9 492 aaPredicted RBP8.76□□□□□ -1.01
USF3-201ENST00000316407 GPR65Q8IYL9 337 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 OR4A15Q8NGL6 344 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 AKAP1Q92667 903 aaKnown RBP eCLIP8.76□□□□□ -1.01
USF3-201ENST00000316407 KIAA0391O15091 583 aaKnown RBP8.76□□□□□ -1.01
USF3-201ENST00000316407 C21orf2O43822 256 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 ZC3H11AO75152 810 aaKnown RBP eCLIP8.76□□□□□ -1.01
USF3-201ENST00000316407 IFNA6P05013 189 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 FAUP35544 74 aaKnown RBP8.76□□□□□ -1.01
USF3-201ENST00000316407 CKLFQ9UBR5 152 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 EFCAB9A8MZ26 197 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 DYRK3O43781 588 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 BBOX1O75936 387 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 CCNB1P14635 433 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 MMP13P45452 471 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 ASMTP46597 345 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 NRG3P56975 720 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 KLF1Q13351 362 aaPredicted RBP8.76□□□□□ -1.01
USF3-201ENST00000316407 GIT2Q14161 759 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 SPATA20Q8TB22 786 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 MAFIPQ8WZ33 124 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 TMEM159Q96B96 161 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 CNOT6Q9ULM6 557 aaKnown RBP8.76□□□□□ -1.01
USF3-201ENST00000316407 A0A1W2PPM1 405 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 CLDN25C9JDP6 229 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 FAM47E-STBD1D6RA91 191 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 HAGHLQ6PII5 290 aaPredicted RBP8.76□□□□□ -1.01
USF3-201ENST00000316407 MAGEE1Q9HCI5 957 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 NKX1-2Q9UD57 310 aaPredicted RBP8.76□□□□□ -1.01
USF3-201ENST00000316407 ODC1P11926 461 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 GRK5P34947 590 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 BNIP3Q12983 259 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 PDCD4Q53EL6 469 aaKnown RBP8.76□□□□□ -1.01
USF3-201ENST00000316407 CNSTQ6PJW8 725 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 CCDC28AQ8IWP9 274 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 NETO2Q8NC67 525 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 RBM4BQ9BQ04 359 aaKnown RBP8.76□□□□□ -1.01
USF3-201ENST00000316407 RBM4Q9BWF3 364 aaKnown RBP8.76□□□□□ -1.01
USF3-201ENST00000316407 TCRBV9S1A1TA0A576 114 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 SUV39H1O43463 412 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 LSM8O95777 96 aaKnown RBP8.76□□□□□ -1.01
USF3-201ENST00000316407 CSN2P05814 226 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 CCNYL3P0C7X3 344 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 ZNF286BP0CG31 522 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 CDK9P50750 372 aaKnown RBP8.76□□□□□ -1.01
USF3-201ENST00000316407 MBTD1Q05BQ5 628 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 C4orf46Q504U0 113 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 PIGBQ92521 554 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 CELF1Q92879 486 aaKnown RBP8.76□□□□□ -1.01
USF3-201ENST00000316407 REPS1Q96D71 796 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 HIF3AQ9Y2N7 669 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 MAGEB16A2A368 324 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 UGT2B17O75795 530 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 SNX4O95219 450 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 NR2C2P49116 596 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 IDNKQ5T6J7 187 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 RACGAP1Q9H0H5 632 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 ARID1AO14497 2285 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 CAMSAP1Q5T5Y3 1602 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 ANGPTL1O95841 491 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 APOC1P02654 83 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 IDO1P14902 403 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 MNDAP41218 407 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 RGS19P49795 217 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 UGT2B15P54855 530 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 FBXO32Q969P5 355 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 RBM7Q9Y580 266 aaKnown RBP8.76□□□□□ -1.01
USF3-201ENST00000316407 YAP1P46937 504 aaKnown RBP8.76□□□□□ -1.01
USF3-201ENST00000316407 MYBPC3Q14896 1274 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 SCAIQ8N9R8 606 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 TSEN15Q8WW01 171 aaKnown RBP8.76□□□□□ -1.01
USF3-201ENST00000316407 ZNF512BQ96KM6 892 aaPredicted RBP8.76□□□□□ -1.01
USF3-201ENST00000316407 SLITRK1Q96PX8 696 aa8.76□□□□□ -1.01
USF3-201ENST00000316407 USP6P35125 1406 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms