RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 MATN2O00339 956 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 RECQL5O94762 991 aaPredicted RBP8.22□□□□□ -1.09
VPS41-202ENST00000310301 USP17L7P0C7H9 530 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 CSF2RAP15509 400 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 TGFBR2P37173 567 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 SQLEQ14534 574 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 OLFML2AQ68BL7 652 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 AADACL2Q6P093 401 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 GALNT18Q6P9A2 607 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 CCDC36Q8IYA8 594 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 RGL4Q8IZJ4 473 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 METTL6Q8TCB7 284 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 RXFP2Q8WXD0 754 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 TLR9Q9NR96 1032 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 AFDNP55196 1824 aaKnown RBP8.22□□□□□ -1.09
VPS41-202ENST00000310301 KPNA5O15131 536 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 AKAP3O75969 853 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 ADH1CP00326 375 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 POU5F1Q01860 360 aaKnown RBP8.22□□□□□ -1.09
VPS41-202ENST00000310301 SLC39A12Q504Y0 691 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 GET4Q7L5D6 327 aaPredicted RBP8.22□□□□□ -1.09
VPS41-202ENST00000310301 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.22□□□□□ -1.09
VPS41-202ENST00000310301 ACOT1Q86TX2 421 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 COMMD2Q86X83 199 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 BRSK2Q8IWQ3 736 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 KIAA0319LQ8IZA0 1049 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 GSTCDQ8NEC7 633 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 SPACA7Q96KW9 195 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 CDCA3Q99618 268 aaPredicted RBP8.22□□□□□ -1.09
VPS41-202ENST00000310301 CBWD1Q9BRT8 395 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 ADI1Q9BV57 179 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 AGXT2Q9BYV1 514 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 GIN1Q9NXP7 522 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 PTGFRNQ9P2B2 879 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 MAPRE3Q9UPY8 281 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 TBC1D3BA6NDS4 549 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 F2P00734 622 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 CHKAP35790 457 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 BLMHQ13867 455 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 PEG10Q86TG7 708 aaKnown RBP8.22□□□□□ -1.09
VPS41-202ENST00000310301 FAM131BQ86XD5 332 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 OFCC1Q8IZS5 231 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 FAM47BQ8NA70 645 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 OR8H1Q8NGG4 311 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 SUSD6Q92537 303 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 ERLEC1Q96DZ1 483 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 VMP1Q96GC9 406 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 GSDMCQ9BYG8 508 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 ADAM28Q9UKQ2 775 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 ACTL7BQ9Y614 415 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 COL18A1P39060 1754 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.22□□□□□ -1.09
VPS41-202ENST00000310301 NFATC1O95644 943 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 SERPINA1P01009 418 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 SERPINA6P08185 405 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 S100A3P33764 101 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 IFNGR2P38484 337 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 MTX3Q5HYI7 312 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 MILR1Q7Z6M3 343 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 RAB43Q86YS6 212 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 DNAJB14Q8TBM8 379 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 AP3S1Q92572 193 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 RPRD1AQ96P16 312 aaPredicted RBP8.22□□□□□ -1.09
VPS41-202ENST00000310301 BCL2L14Q9BZR8 327 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 NT5MQ9NPB1 228 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 OGDHLQ9ULD0 1010 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 ERGIC3Q9Y282 383 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 CACNA1FO60840 1977 aa8.22□□□□□ -1.09
VPS41-202ENST00000310301 A0A087X1B8 175 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 CYP7B1O75881 506 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 LSM8O95777 96 aaKnown RBP8.21□□□□□ -1.09
VPS41-202ENST00000310301 SNAI1O95863 264 aaPredicted RBP8.21□□□□□ -1.09
VPS41-202ENST00000310301 ECDO95905 644 aaPredicted RBP8.21□□□□□ -1.09
VPS41-202ENST00000310301 CST1P01037 141 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 ZSCAN5DPP0CG00 497 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 ITGB6P18564 788 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 TUBA4AP68366 448 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 NAB1Q13506 487 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 ANKS6Q68DC2 871 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 CMTR2Q8IYT2 770 aaKnown RBP8.21□□□□□ -1.09
VPS41-202ENST00000310301 LRRC20Q8TCA0 184 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 NKX2-4Q9H2Z4 354 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 S100A14Q9HCY8 104 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 TBC1D13Q9NVG8 400 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 ASB3Q9Y575 518 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 SPACA6W5XKT8 324 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 SLC12A8A0AV02 714 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 RGS14O43566 566 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 ATG13O75143 517 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 EPN2O95208 641 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 VAPBO95292 243 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 LYNP07948 512 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 HPGDP15428 266 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 OR1D2P34982 312 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 ST3GAL1Q11201 340 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 CDH17Q12864 832 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 IL27RAQ6UWB1 636 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 MFSD7Q6UXD7 560 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 ZNF720Q7Z2F6 126 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 FAM13CQ8NE31 585 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms