RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 RECQL4O94761 1208 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 RBP1P09455 135 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 ZNF12P17014 697 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 GRM5P41594 1212 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 CCNA1P78396 465 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 NFYCQ13952 458 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 ELMSAN1Q6PJG2 1045 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 LYSMD3Q7Z3D4 306 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 RIOX2Q8IUF8 465 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 CLEC4FQ8N1N0 589 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 TERB1Q8NA31 727 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 B3GALNT2Q8NCR0 500 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 C19orf60Q96EN9 201 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 ZNF560Q96MR9 790 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 NPY6RQ99463 290 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 TKTL2Q9H0I9 626 aa11.2□□□□□ -0.62
PTPN7-201ENST00000309017 KCNH1O95259 989 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 LTA4HP09960 611 aaKnown RBP11.19□□□□□ -0.62
PTPN7-201ENST00000309017 NPR3P17342 541 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 CD247P20963 164 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 PDCD4Q53EL6 469 aaKnown RBP11.19□□□□□ -0.62
PTPN7-201ENST00000309017 TMTC4Q5T4D3 741 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 RAB44Q7Z6P3 723 aaPredicted RBP11.19□□□□□ -0.62
PTPN7-201ENST00000309017 ZC3H7AQ8IWR0 971 aaKnown RBP11.19□□□□□ -0.62
PTPN7-201ENST00000309017 LZTR1Q8N653 840 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 ZC3H15Q8WU90 426 aaKnown RBP11.19□□□□□ -0.62
PTPN7-201ENST00000309017 VAT1Q99536 393 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 EIF2AQ9BY44 585 aaKnown RBP11.19□□□□□ -0.62
PTPN7-201ENST00000309017 TNFRSF12AQ9NP84 129 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 CCM2LQ9NUG4 571 aaPredicted RBP11.19□□□□□ -0.62
PTPN7-201ENST00000309017 SMPD3Q9NY59 655 aaPredicted RBP11.19□□□□□ -0.62
PTPN7-201ENST00000309017 TMEM181Q9P2C4 612 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 UBQLN1Q9UMX0 589 aaKnown RBP11.19□□□□□ -0.62
PTPN7-201ENST00000309017 SCN1AP35498 2009 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 NME4O00746 187 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 PSMD3O43242 534 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 ANXA9O76027 345 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 STAU1O95793 577 aaKnown RBP11.19□□□□□ -0.62
PTPN7-201ENST00000309017 LDLRP01130 860 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 USP17L7P0C7H9 530 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 MYF6P23409 242 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 TAF6P49848 677 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 PSMD5Q16401 504 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 LDB1Q86U70 411 aaPredicted RBP11.19□□□□□ -0.62
PTPN7-201ENST00000309017 PELI3Q8N2H9 469 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 MIER2Q8N344 545 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 LRRC52Q8N7C0 313 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 MAELQ96JY0 434 aaKnown RBP11.19□□□□□ -0.62
PTPN7-201ENST00000309017 RNF145Q96MT1 663 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 KIFC1Q9BW19 673 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 RHOBTB2Q9BYZ6 727 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 CCDC90BQ9GZT6 254 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 NXF3Q9H4D5 531 aaKnown RBP11.19□□□□□ -0.62
PTPN7-201ENST00000309017 FANCEQ9HB96 536 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 SPON1Q9HCB6 807 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 MID1IP1Q9NPA3 183 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 DAPK2Q9UIK4 370 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 BRCA2P51587 3418 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 BEST1O76090 585 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 LGALS2P05162 132 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 GFAPP14136 432 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 EDNRBP24530 442 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 SCNN1AP37088 669 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 RPS9P46781 194 aaKnown RBP11.19□□□□□ -0.62
PTPN7-201ENST00000309017 BCAP31P51572 246 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 OCA2Q04671 838 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 FAM187BQ17R55 369 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 PERM1Q5SV97 790 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 BTBD8Q5XKL5 378 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 SMYD5Q6GMV2 418 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 FAM45BPQ6NSW5 357 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 DCDC5Q6ZRR9 648 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 CMTR2Q8IYT2 770 aaKnown RBP11.19□□□□□ -0.62
PTPN7-201ENST00000309017 FAM45AQ8TCE6 357 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 KCTD14Q9BQ13 255 aaPredicted RBP11.19□□□□□ -0.62
PTPN7-201ENST00000309017 R3HDMLQ9H3Y0 253 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 BTRCQ9Y297 605 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 TSC22D4Q9Y3Q8 395 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 PTGDR2Q9Y5Y4 395 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 THSD7AQ9UPZ6 1657 aa11.19□□□□□ -0.62
PTPN7-201ENST00000309017 YJEFN3A6XGL0 299 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 KDM1AO60341 852 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 SNAP91O60641 907 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 OXTRP30559 389 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 CAPGP40121 348 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 CHRNA4P43681 627 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 CTBSQ01459 385 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 POU4F1Q01851 419 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 TGFBIQ15582 683 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 DCAF4L1Q3SXM0 396 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 CCDC92Q53HC0 331 aaPredicted RBP11.18□□□□□ -0.62
PTPN7-201ENST00000309017 KCTD11Q693B1 232 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 SLC22A9Q8IVM8 553 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 PACRGLQ8N7B6 248 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 OR52K2Q8NGK3 314 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 HMGCLL1Q8TB92 370 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 TBC1D15Q8TC07 691 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 DQX1Q8TE96 717 aaKnown RBP11.18□□□□□ -0.62
PTPN7-201ENST00000309017 TSPAN17Q96FV3 270 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 DUSP16Q9BY84 665 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms