RNA–Protein interactions for RNA: ENST00000296088.11

SNRK-201, Transcript of SNF related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRK, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRK-201ENST00000296088 C14orf105Q9NVL8 296 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 TULP2O00295 520 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 RFXANKO14593 260 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 BCKDKO14874 412 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 AZIN1O14977 448 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 CLPXO76031 633 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 HMGCRP04035 888 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 ITGAVP06756 1048 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 BST1Q10588 318 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 INO80EQ8NBZ0 244 aaPredicted RBP12.5□□□□□ -0.41
SNRK-201ENST00000296088 ZNF548Q8NEK5 533 aaPredicted RBP12.5□□□□□ -0.41
SNRK-201ENST00000296088 OR2T34Q8NGX1 318 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 OR2T3Q8NH03 318 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 CERS2Q96G23 380 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 PPP1R16AQ96I34 528 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 PCDH12Q9NPG4 1184 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 USP6P35125 1406 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 FAM237BA0A1B0GVD1 139 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 AVILO75366 819 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 KRT33AO76009 404 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 ECHS1P30084 290 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 GRIA4P48058 902 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 KCNJ2P63252 427 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 OCLNQ16625 522 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 CCSAPQ6IQ19 270 aaPredicted RBP12.5□□□□□ -0.41
SNRK-201ENST00000296088 PTF1AQ7RTS3 328 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 ZNF720Q7Z2F6 126 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 RIOX2Q8IUF8 465 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 C4orf19Q8IY42 314 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 C9orf43Q8TAL5 461 aaPredicted RBP12.5□□□□□ -0.41
SNRK-201ENST00000296088 RAET1EQ8TD07 263 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 ZNF285Q96NJ3 590 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 PANX1Q96RD7 426 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 CDH19Q9H159 772 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 SEMA4BQ9NPR2 832 aaPredicted RBP12.5□□□□□ -0.41
SNRK-201ENST00000296088 NCKAP1Q9Y2A7 1128 aa12.5□□□□□ -0.41
SNRK-201ENST00000296088 B3GAT3O94766 335 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 CYP1A2P05177 515 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 C6orf222P0C671 652 aaPredicted RBP12.49□□□□□ -0.41
SNRK-201ENST00000296088 HGFP14210 728 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 RAB10P61026 200 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 ADAM8P78325 824 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 BAP1Q92560 729 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 RNF31Q96EP0 1072 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 FAM84BQ96KN1 310 aaPredicted RBP12.49□□□□□ -0.41
SNRK-201ENST00000296088 ACSS3Q9H6R3 686 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 TMEM165Q9HC07 324 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 MRPS33Q9Y291 106 aaKnown RBP12.49□□□□□ -0.41
SNRK-201ENST00000296088 A0A1B0GVC2 190 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 PDE2AO00408 941 aaPredicted RBP12.49□□□□□ -0.41
SNRK-201ENST00000296088 MID1O15344 667 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 MSH4O15457 936 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 AIREO43918 545 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 EDF1O60869 148 aaKnown RBP12.49□□□□□ -0.41
SNRK-201ENST00000296088 SLC22A3O75751 556 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 URODP06132 367 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 STOMP27105 288 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 HMGCS2P54868 508 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 SNAPC2Q13487 334 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 GIT2Q14161 759 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 C15orf59Q2T9L4 293 aaPredicted RBP12.49□□□□□ -0.41
SNRK-201ENST00000296088 FBXO47Q5MNV8 452 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 ATXN7L2Q5T6C5 722 aaPredicted RBP12.49□□□□□ -0.41
SNRK-201ENST00000296088 RAB11FIP2Q7L804 512 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 CNTD1Q8N815 330 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 FAM98AQ8NCA5 519 aaKnown RBP12.49□□□□□ -0.41
SNRK-201ENST00000296088 NXF3Q9H4D5 531 aaKnown RBP12.49□□□□□ -0.41
SNRK-201ENST00000296088 RCOR3Q9P2K3 495 aaPredicted RBP12.49□□□□□ -0.41
SNRK-201ENST00000296088 PLA2R1Q13018 1463 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 FAM205CA6NFA0 338 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 OR2AT4A6NND4 320 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 FADS2P1A8MWK0 482 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 NRP2O60462 931 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 TM7SF2O76062 418 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 THP07101 528 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 MMP13P45452 471 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 ARCN1P48444 511 aaKnown RBP12.49□□□□□ -0.41
SNRK-201ENST00000296088 PFKFB4Q16877 469 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 CTXN3Q4LDR2 81 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 ZCCHC23Q6ZST2 131 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 TMEM17Q86X19 198 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 TMEM192Q8IY95 271 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 DNAJC18Q9H819 358 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 THG1LQ9NWX6 298 aaKnown RBP12.49□□□□□ -0.41
SNRK-201ENST00000296088 OR10H1Q9Y4A9 318 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 AP2A2O94973 939 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 RPLP0P05388 317 aaKnown RBP12.49□□□□□ -0.41
SNRK-201ENST00000296088 IGFBP5P24593 272 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 ASMTP46597 345 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 ITGA7Q13683 1181 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 HERC3Q15034 1050 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 USP49Q70CQ1 688 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 APTXQ7Z2E3 356 aaKnown RBP12.49□□□□□ -0.41
SNRK-201ENST00000296088 DNAJB8Q8NHS0 232 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 RIT1Q92963 219 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 MTMR8Q96EF0 704 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 TTLL2Q9BWV7 592 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 PLK2Q9NYY3 685 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 PCDHB5Q9Y5E4 795 aa12.49□□□□□ -0.41
SNRK-201ENST00000296088 PDLIM1O00151 329 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms