RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 GPR22Q99680 433 aa15.97■□□□□ 0.15
SMAD6-201ENST00000288840 TM6SF2Q9BZW4 377 aa15.97■□□□□ 0.15
SMAD6-201ENST00000288840 FLRT1Q9NZU1 646 aa15.97■□□□□ 0.15
SMAD6-201ENST00000288840 NDUFAF1Q9Y375 327 aa15.97■□□□□ 0.15
SMAD6-201ENST00000288840 LTBP3Q9NS15 1303 aa15.96■□□□□ 0.15
SMAD6-201ENST00000288840 A6NHS1 94 aa15.96■□□□□ 0.15
SMAD6-201ENST00000288840 IRAK2O43187 625 aa15.96■□□□□ 0.15
SMAD6-201ENST00000288840 ALDH1A2O94788 518 aa15.96■□□□□ 0.15
SMAD6-201ENST00000288840 HMOX2P30519 316 aa15.96■□□□□ 0.15
SMAD6-201ENST00000288840 MS4A2Q01362 244 aa15.96■□□□□ 0.15
SMAD6-201ENST00000288840 SEMG2Q02383 582 aa15.96■□□□□ 0.15
SMAD6-201ENST00000288840 CEACAM7Q14002 265 aa15.96■□□□□ 0.15
SMAD6-201ENST00000288840 CNPY1Q3B7I2 92 aa15.96■□□□□ 0.15
SMAD6-201ENST00000288840 STEAP4Q687X5 459 aa15.96■□□□□ 0.15
SMAD6-201ENST00000288840 LINGO4Q6UY18 593 aa15.96■□□□□ 0.15
SMAD6-201ENST00000288840 AGMOQ6ZNB7 445 aa15.96■□□□□ 0.15
SMAD6-201ENST00000288840 FNDC5Q8NAU1 212 aa15.96■□□□□ 0.15
SMAD6-201ENST00000288840 OR10T2Q8NGX3 314 aa15.96■□□□□ 0.15
SMAD6-201ENST00000288840 THUMPD3Q9BV44 507 aaKnown RBP15.96■□□□□ 0.15
SMAD6-201ENST00000288840 ZYG11BQ9C0D3 744 aa15.96■□□□□ 0.15
SMAD6-201ENST00000288840 SLC30A1Q9Y6M5 507 aa15.96■□□□□ 0.15
SMAD6-201ENST00000288840 SH3BGRLO75368 114 aa15.96■□□□□ 0.15
SMAD6-201ENST00000288840 PRSS56P0CW18 603 aa15.96■□□□□ 0.15
SMAD6-201ENST00000288840 DUSP4Q13115 394 aa15.96■□□□□ 0.15
SMAD6-201ENST00000288840 PTRHD1Q6GMV3 140 aaKnown RBP15.96■□□□□ 0.15
SMAD6-201ENST00000288840 CCDC126Q96EE4 140 aa15.96■□□□□ 0.15
SMAD6-201ENST00000288840 PRKD2Q9BZL6 878 aa15.96■□□□□ 0.15
SMAD6-201ENST00000288840 NMUR1Q9HB89 426 aa15.96■□□□□ 0.15
SMAD6-201ENST00000288840 MRPL40Q9NQ50 206 aaKnown RBP15.96■□□□□ 0.15
SMAD6-201ENST00000288840 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.96■□□□□ 0.15
SMAD6-201ENST00000288840 TRMT6Q9UJA5 497 aaKnown RBP15.96■□□□□ 0.15
SMAD6-201ENST00000288840 PCDHGC4Q9Y5F7 938 aa15.96■□□□□ 0.15
SMAD6-201ENST00000288840 BRWD3Q6RI45 1802 aa15.96■□□□□ 0.15
SMAD6-201ENST00000288840 H3BMM5 538 aa15.96■□□□□ 0.14
SMAD6-201ENST00000288840 PDLIM1O00151 329 aa15.96■□□□□ 0.14
SMAD6-201ENST00000288840 ATP5BP06576 529 aaKnown RBP15.96■□□□□ 0.14
SMAD6-201ENST00000288840 HAPLN1P10915 354 aaPredicted RBP15.96■□□□□ 0.14
SMAD6-201ENST00000288840 NCK1P16333 377 aa15.96■□□□□ 0.14
SMAD6-201ENST00000288840 UGT1A6P19224 532 aa15.96■□□□□ 0.14
SMAD6-201ENST00000288840 CCNCP24863 283 aa15.96■□□□□ 0.14
SMAD6-201ENST00000288840 ALFQ53S48 1182 aa15.96■□□□□ 0.14
SMAD6-201ENST00000288840 GLT6D1Q7Z4J2 308 aa15.96■□□□□ 0.14
SMAD6-201ENST00000288840 VPS33AQ96AX1 596 aa15.96■□□□□ 0.14
SMAD6-201ENST00000288840 ACOX2Q99424 681 aa15.96■□□□□ 0.14
SMAD6-201ENST00000288840 ACTL7AQ9Y615 435 aa15.96■□□□□ 0.14
SMAD6-201ENST00000288840 TRIM38O00635 465 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 NRP2O60462 931 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 LAMB3Q13751 1172 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 METTL21CQ5VZV1 264 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 NTAN1Q96AB6 310 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 RNF145Q96MT1 663 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 SLC25A23Q9BV35 468 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 COQ10BQ9H8M1 238 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 SPAG4Q9NPE6 437 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 I6L893 689 aaPredicted RBP15.95■□□□□ 0.14
SMAD6-201ENST00000288840 GJB3O75712 270 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 CRTAMO95727 393 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 ASGR1P07306 291 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 DNAJB2P25686 324 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 ACVRL1P37023 503 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 CDH15P55291 814 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 GK3PQ14409 553 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 SPRYD7Q5W111 196 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 MTFMTQ96DP5 389 aaKnown RBP15.95■□□□□ 0.14
SMAD6-201ENST00000288840 TBCDQ9BTW9 1192 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 ZFYVE28Q9HCC9 887 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 ATP13A1Q9HD20 1204 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 HS3ST4Q9Y661 456 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 A0A087X1B8 175 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 A0A0J9YYE9 177 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 CCDC189A1A4V9 331 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 A8MT66 165 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 FFAR3O14843 346 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 GPR42O15529 346 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 TNFAIP8O95379 198 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 KCNA5P22460 613 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 PSMA4P25789 261 aaKnown RBP15.95■□□□□ 0.14
SMAD6-201ENST00000288840 TUSC3Q13454 348 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 GRB14Q14449 540 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 NR6A1Q15406 480 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 NEDD8Q15843 81 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 TIGD2Q4W5G0 525 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 ARMC3Q5W041 872 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 ANGPTL8Q6UXH0 198 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 PDSS2Q86YH6 399 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 PGAM4Q8N0Y7 254 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 OR4K2Q8NGD2 314 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 MAGEE2Q8TD90 523 aaPredicted RBP15.95■□□□□ 0.14
SMAD6-201ENST00000288840 KCTD13Q8WZ19 329 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 PKP3Q9Y446 797 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 PCDHB5Q9Y5E4 795 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 TTC3P53804 2025 aa15.95■□□□□ 0.14
SMAD6-201ENST00000288840 CD3EAPO15446 510 aaKnown RBP15.94■□□□□ 0.14
SMAD6-201ENST00000288840 FGF10O15520 208 aaPredicted RBP15.94■□□□□ 0.14
SMAD6-201ENST00000288840 EEF1DP29692 281 aaKnown RBP15.94■□□□□ 0.14
SMAD6-201ENST00000288840 CPOXP36551 454 aa15.94■□□□□ 0.14
SMAD6-201ENST00000288840 MAGEA3P43357 314 aa15.94■□□□□ 0.14
SMAD6-201ENST00000288840 NRG1Q02297 640 aaPredicted RBP15.94■□□□□ 0.14
SMAD6-201ENST00000288840 RAD51Q06609 339 aa15.94■□□□□ 0.14
SMAD6-201ENST00000288840 ITGA7Q13683 1181 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms