RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 USP27XA6NNY8 438 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 TLR4O00206 839 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 VILLO15195 856 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 RAD51BO15315 384 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 MT-CYBP00156 380 aaPredicted RBP6.56□□□□□ -1.36
CD44-204ENST00000279452 IFNB1P01574 187 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 FGGP02679 453 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 WNT1P04628 370 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 PDHA1P08559 390 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 SDHBP21912 280 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 TGM1P22735 817 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 ID4P47928 161 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 ARRB1P49407 418 aaPredicted RBP6.56□□□□□ -1.36
CD44-204ENST00000279452 CCT8P50990 548 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 THOP1P52888 689 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 SKOR1P84550 965 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 WASHC5Q12768 1159 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 RALGDSQ12967 914 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 XRCC4Q13426 336 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 PDE1CQ14123 709 aaPredicted RBP6.56□□□□□ -1.36
CD44-204ENST00000279452 FGL2Q14314 439 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 LRRC14Q15048 493 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 PTPRRQ15256 657 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 IRF4Q15306 451 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 LONRF2Q1L5Z9 754 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 TMEM52BQ4KMG9 183 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 PRAMEF14Q5SWL7 426 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 LRRC66Q68CR7 880 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 KDM7AQ6ZMT4 941 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 GCNT7Q6ZNI0 430 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 ZNF662Q6ZS27 426 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 Q6ZSR6 202 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 DPPA4Q7L190 304 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 GSTA5Q7RTV2 222 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 TSPAN33Q86UF1 283 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 SLC13A5Q86YT5 568 aaPredicted RBP6.56□□□□□ -1.36
CD44-204ENST00000279452 ZNF567Q8N184 647 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 SLC35F6Q8N357 371 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 SLC25A41Q8N5S1 370 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 CNTD1Q8N815 330 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 CCDC89Q8N998 374 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 FAM71DQ8N9W8 422 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 OR13H1Q8NG92 308 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 CCDC110Q8TBZ0 833 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 SETD7Q8WTS6 366 aaKnown RBP6.56□□□□□ -1.36
CD44-204ENST00000279452 C1orf54Q8WWF1 131 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 LRRC45Q96CN5 670 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 ECHDC3Q96DC8 303 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 NUS1Q96E22 293 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 IMP4Q96G21 291 aaKnown RBP6.56□□□□□ -1.36
CD44-204ENST00000279452 TEKT5Q96M29 485 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 NSMCE3Q96MG7 304 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 SMIM14Q96QK8 99 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 VAT1Q99536 393 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 ORAI3Q9BRQ5 295 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 SLC25A51Q9H1U9 297 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 CARD9Q9H257 536 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 SUDS3Q9H7L9 328 aaPredicted RBP6.56□□□□□ -1.36
CD44-204ENST00000279452 IL21RQ9HBE5 538 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 MOSPD1Q9UJG1 213 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 TRHDEQ9UKU6 1024 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 PYCARDQ9ULZ3 195 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 ZNF148Q9UQR1 794 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 FNDC3AQ9Y2H6 1198 aaKnown RBP6.56□□□□□ -1.36
CD44-204ENST00000279452 R3HDM2Q9Y2K5 976 aaKnown RBP6.56□□□□□ -1.36
CD44-204ENST00000279452 JRKLQ9Y4A0 524 aa6.56□□□□□ -1.36
CD44-204ENST00000279452 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.56□□□□□ -1.36
CD44-204ENST00000279452 FANCMQ8IYD8 2048 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 PLXND1Q9Y4D7 1925 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 A0A0J9YYE9 177 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 C1orf232A0A0U1RR37 186 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 DCDC2BA2VCK2 349 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 POM121BA6NF01 834 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 CAPN8A6NHC0 703 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 HTRA2O43464 458 aaPredicted RBP6.55□□□□□ -1.36
CD44-204ENST00000279452 SDC3O75056 442 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 ZNF189O75820 626 aaPredicted RBP6.55□□□□□ -1.36
CD44-204ENST00000279452 RECQL5O94762 991 aaPredicted RBP6.55□□□□□ -1.36
CD44-204ENST00000279452 HEXIM1O94992 359 aaKnown RBP6.55□□□□□ -1.36
CD44-204ENST00000279452 TRBC1P01850 177 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 ATP1A1P05023 1023 aaKnown RBP6.55□□□□□ -1.36
CD44-204ENST00000279452 ITGAVP06756 1048 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 MMP2P08253 660 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 PIRTP0C851 137 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 LHCGRP22888 699 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 PSMB4P28070 264 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 ACTN2P35609 894 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 HNF1BP35680 557 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 IGFALSP35858 605 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 ETV3P41162 512 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 RABIFP47224 123 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 LMAN1P49257 510 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 GEMP55040 296 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 NXPH1P58417 271 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 GNG11P61952 73 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 CDK18Q07002 472 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 TCEA2Q15560 299 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 CNGA3Q16281 694 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 ZNF542PQ5EBM4 170 aa6.55□□□□□ -1.36
CD44-204ENST00000279452 ANKRD20A2Q5SQ80 823 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms