RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 PDSS2Q86YH6 399 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 CDYL2Q8N8U2 506 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 OR2T34Q8NGX1 318 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 OR2T3Q8NH03 318 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 LPPQ93052 612 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 DPEP3Q9H4B8 488 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 RMND5AQ9H871 391 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 GBA2Q9HCG7 927 aaPredicted RBP11.6□□□□□ -0.55
VPS33A-201ENST00000267199 TAS2R13Q9NYV9 303 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 C4AP0C0L4 1744 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 C4BP0C0L5 1744 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 ALS2Q96Q42 1657 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 SLC15A5A6NIM6 579 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 TRAFD1O14545 582 aaPredicted RBP11.6□□□□□ -0.55
VPS33A-201ENST00000267199 SNPHO15079 494 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 ZBTB24O43167 697 aaPredicted RBP11.6□□□□□ -0.55
VPS33A-201ENST00000267199 DNAJA2O60884 412 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 CAPN1P07384 714 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 ALOX15P16050 662 aaPredicted RBP11.6□□□□□ -0.55
VPS33A-201ENST00000267199 CD86P42081 329 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 NRG1Q02297 640 aaPredicted RBP11.6□□□□□ -0.55
VPS33A-201ENST00000267199 ZNF460Q14592 562 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 ARHGAP17Q68EM7 881 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 FAM45BPQ6NSW5 357 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 UGT3A1Q6NUS8 523 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 ACTRT2Q8TDY3 377 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 SH3KBP1Q96B97 665 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 AGAP2Q99490 1192 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 ADI1Q9BV57 179 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 RHOJQ9H4E5 214 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 NMRK2Q9NPI5 230 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 SFMBT1Q9UHJ3 866 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 C3orf18Q9UK00 162 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 LSM7Q9UK45 103 aaKnown RBP11.6□□□□□ -0.55
VPS33A-201ENST00000267199 PCDHB12Q9Y5F1 795 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 GCATO75600 419 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 ABCB1P08183 1280 aaPredicted RBP11.6□□□□□ -0.55
VPS33A-201ENST00000267199 MSH3P20585 1137 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 PTPN9P43378 593 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 CDH18Q13634 790 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 CDCA2Q69YH5 1023 aaPredicted RBP11.6□□□□□ -0.55
VPS33A-201ENST00000267199 FAM35AQ86V20 835 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 RALGPS2Q86X27 583 aaPredicted RBP11.6□□□□□ -0.55
VPS33A-201ENST00000267199 ZDHHC14Q8IZN3 488 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 DCBLD1Q8N8Z6 715 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 LPCAT1Q8NF37 534 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 CLPBQ9H078 707 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 ELOVL6Q9H5J4 265 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 DTLQ9NZJ0 730 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 DNAJB4Q9UDY4 337 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 TELO2Q9Y4R8 837 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.6□□□□□ -0.55
VPS33A-201ENST00000267199 TIAM2Q8IVF5 1701 aa11.6□□□□□ -0.55
VPS33A-201ENST00000267199 MYH7BA7E2Y1 1941 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 A0A087X1B8 175 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 A6NHS1 94 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 F8W810 466 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 TSPAN1O60635 241 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 RHOCP08134 193 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 TFPTP0C1Z6 253 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 KLF1Q13351 362 aaPredicted RBP11.59□□□□□ -0.55
VPS33A-201ENST00000267199 INSCQ1MX18 579 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 SLC39A12Q504Y0 691 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 TEX44Q53QW1 395 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 TYW3Q6IPR3 259 aaKnown RBP11.59□□□□□ -0.55
VPS33A-201ENST00000267199 PKN3Q6P5Z2 889 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 RHBDF2Q6PJF5 856 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 KCTD8Q6ZWB6 473 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 BBS7Q8IWZ6 715 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 CLEC4CQ8WTT0 213 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 PPM1MQ96MI6 270 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 PKP2Q99959 881 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 HERPUD2Q9BSE4 406 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 ZFP14Q9HCL3 533 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 PRDM5Q9NQX1 630 aaPredicted RBP11.59□□□□□ -0.55
VPS33A-201ENST00000267199 CHD4Q14839 1912 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 GNAZP19086 355 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 IL12RB1P42701 662 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 ENTPD1P49961 510 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 AARS2Q5JTZ9 985 aaKnown RBP11.59□□□□□ -0.55
VPS33A-201ENST00000267199 ADHFE1Q8IWW8 467 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 ZNF567Q8N184 647 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 NAT16Q8N8M0 369 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 OR56A4Q8NGH8 313 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 ZFP42Q96MM3 310 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 LPIN3Q9BQK8 851 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 FBXO44Q9H4M3 255 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 MINDY3Q9H8M7 445 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 SCUBE2Q9NQ36 999 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 ABCC13Q9NSE7 274 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 NCK1P16333 377 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 SLC18A1P54219 525 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 TPTEP56180 551 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 FSCN1Q16658 493 aaKnown RBP11.59□□□□□ -0.55
VPS33A-201ENST00000267199 DGKKQ5KSL6 1271 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 PDZK1Q5T2W1 519 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 TMEM214Q6NUQ4 689 aaKnown RBP11.59□□□□□ -0.55
VPS33A-201ENST00000267199 C19orf18Q8NEA5 215 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 MYLPFQ96A32 169 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 PAWRQ96IZ0 340 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms