RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 KCNN4O15554 427 aa8.81□□□□□ -1
VAPB-201ENST00000265619 GLRA3O75311 464 aa8.81□□□□□ -1
VAPB-201ENST00000265619 KRT3P12035 628 aa8.81□□□□□ -1
VAPB-201ENST00000265619 ITIH1P19827 911 aa8.81□□□□□ -1
VAPB-201ENST00000265619 RBL1P28749 1068 aa8.81□□□□□ -1
VAPB-201ENST00000265619 PTPN7P35236 360 aa8.81□□□□□ -1
VAPB-201ENST00000265619 CAPGP40121 348 aa8.81□□□□□ -1
VAPB-201ENST00000265619 TFAMQ00059 246 aaKnown RBP8.81□□□□□ -1
VAPB-201ENST00000265619 STK11Q15831 433 aa8.81□□□□□ -1
VAPB-201ENST00000265619 ATP6AP1Q15904 470 aa8.81□□□□□ -1
VAPB-201ENST00000265619 KIZQ2M2Z5 673 aa8.81□□□□□ -1
VAPB-201ENST00000265619 FAM205BPQ63HN1 556 aa8.81□□□□□ -1
VAPB-201ENST00000265619 TXNDC11Q6PKC3 985 aa8.81□□□□□ -1
VAPB-201ENST00000265619 CDR2LQ86X02 465 aaPredicted RBP8.81□□□□□ -1
VAPB-201ENST00000265619 ERO1BQ86YB8 467 aa8.81□□□□□ -1
VAPB-201ENST00000265619 PHF13Q86YI8 300 aaPredicted RBP8.81□□□□□ -1
VAPB-201ENST00000265619 TERB1Q8NA31 727 aa8.81□□□□□ -1
VAPB-201ENST00000265619 NETO2Q8NC67 525 aa8.81□□□□□ -1
VAPB-201ENST00000265619 PDPRQ8NCN5 879 aa8.81□□□□□ -1
VAPB-201ENST00000265619 OR6Q1Q8NGQ2 317 aa8.81□□□□□ -1
VAPB-201ENST00000265619 NECTIN4Q96NY8 510 aa8.81□□□□□ -1
VAPB-201ENST00000265619 SPATC1LQ9H0A9 340 aa8.81□□□□□ -1
VAPB-201ENST00000265619 DHX35Q9H5Z1 703 aaKnown RBP8.81□□□□□ -1
VAPB-201ENST00000265619 LRRC40Q9H9A6 602 aa8.81□□□□□ -1
VAPB-201ENST00000265619 IL1RL2Q9HB29 575 aa8.81□□□□□ -1
VAPB-201ENST00000265619 FKBP14Q9NWM8 211 aa8.81□□□□□ -1
VAPB-201ENST00000265619 PAQR5Q9NXK6 330 aaPredicted RBP8.81□□□□□ -1
VAPB-201ENST00000265619 KCNN3Q9UGI6 736 aa8.81□□□□□ -1
VAPB-201ENST00000265619 EVLQ9UI08 416 aaPredicted RBP8.81□□□□□ -1
VAPB-201ENST00000265619 FIS1Q9Y3D6 152 aa8.81□□□□□ -1
VAPB-201ENST00000265619 RAD54BQ9Y620 910 aa8.81□□□□□ -1
VAPB-201ENST00000265619 V9GYQ6 96 aa8.81□□□□□ -1
VAPB-201ENST00000265619 ZNF646O15015 1829 aaPredicted RBP8.81□□□□□ -1
VAPB-201ENST00000265619 CCL15-CCL14A0A0B4J2E2 113 aa8.81□□□□□ -1
VAPB-201ENST00000265619 LRRIQ4A6NIV6 560 aa8.81□□□□□ -1
VAPB-201ENST00000265619 AGXTP21549 392 aa8.81□□□□□ -1
VAPB-201ENST00000265619 MMP8P22894 467 aa8.81□□□□□ -1
VAPB-201ENST00000265619 NLRP11P59045 1033 aaKnown RBP8.81□□□□□ -1
VAPB-201ENST00000265619 NCS1P62166 190 aa8.81□□□□□ -1
VAPB-201ENST00000265619 OLIG2Q13516 323 aa8.81□□□□□ -1
VAPB-201ENST00000265619 HERC3Q15034 1050 aa8.81□□□□□ -1
VAPB-201ENST00000265619 CDK10Q15131 360 aa8.81□□□□□ -1
VAPB-201ENST00000265619 CCL15Q16663 113 aa8.81□□□□□ -1
VAPB-201ENST00000265619 ARL13AQ5H913 290 aaPredicted RBP8.81□□□□□ -1
VAPB-201ENST00000265619 TIFABQ6ZNK6 161 aa8.81□□□□□ -1
VAPB-201ENST00000265619 RPS27LQ71UM5 84 aaKnown RBP8.81□□□□□ -1
VAPB-201ENST00000265619 HAUS6Q7Z4H7 955 aa8.81□□□□□ -1
VAPB-201ENST00000265619 WDTC1Q8N5D0 677 aa8.81□□□□□ -1
VAPB-201ENST00000265619 SEPT8Q92599 483 aa8.81□□□□□ -1
VAPB-201ENST00000265619 CCDC120Q96HB5 630 aa8.81□□□□□ -1
VAPB-201ENST00000265619 TUBA1CQ9BQE3 449 aa8.81□□□□□ -1
VAPB-201ENST00000265619 CHID1Q9BWS9 393 aa8.81□□□□□ -1
VAPB-201ENST00000265619 BBS2Q9BXC9 721 aa8.81□□□□□ -1
VAPB-201ENST00000265619 PORCNQ9H237 461 aa8.81□□□□□ -1
VAPB-201ENST00000265619 TOR3AQ9H497 397 aa8.81□□□□□ -1
VAPB-201ENST00000265619 RUBCNLQ9H714 662 aa8.81□□□□□ -1
VAPB-201ENST00000265619 AGPAT4Q9NRZ5 378 aa8.81□□□□□ -1
VAPB-201ENST00000265619 DDX28Q9NUL7 540 aaKnown RBP8.81□□□□□ -1
VAPB-201ENST00000265619 PAK1IP1Q9NWT1 392 aaPredicted RBP8.81□□□□□ -1
VAPB-201ENST00000265619 CACNA2D2Q9NY47 1150 aa8.81□□□□□ -1
VAPB-201ENST00000265619 HMGXB4Q9UGU5 601 aa8.81□□□□□ -1
VAPB-201ENST00000265619 EIF3LQ9Y262 564 aaKnown RBP8.81□□□□□ -1
VAPB-201ENST00000265619 PCDHB4Q9Y5E5 795 aa8.81□□□□□ -1
VAPB-201ENST00000265619 HEATR9A2RTY3 570 aa8.8□□□□□ -1
VAPB-201ENST00000265619 PIGNO95427 931 aa8.8□□□□□ -1
VAPB-201ENST00000265619 MT-CO1P00395 513 aa8.8□□□□□ -1
VAPB-201ENST00000265619 IFI30P13284 250 aa8.8□□□□□ -1
VAPB-201ENST00000265619 ICAM2P13598 275 aa8.8□□□□□ -1
VAPB-201ENST00000265619 ETV3P41162 512 aa8.8□□□□□ -1
VAPB-201ENST00000265619 EIF2DP41214 584 aaKnown RBP8.8□□□□□ -1
VAPB-201ENST00000265619 SLC7A2P52569 658 aa8.8□□□□□ -1
VAPB-201ENST00000265619 ROR1Q01973 937 aa8.8□□□□□ -1
VAPB-201ENST00000265619 SNTA1Q13424 505 aa8.8□□□□□ -1
VAPB-201ENST00000265619 TRPC3Q13507 836 aa8.8□□□□□ -1
VAPB-201ENST00000265619 SEZ6Q53EL9 994 aa8.8□□□□□ -1
VAPB-201ENST00000265619 REP15Q6BDI9 236 aa8.8□□□□□ -1
VAPB-201ENST00000265619 USP51Q70EK9 711 aa8.8□□□□□ -1
VAPB-201ENST00000265619 CATSPER4Q7RTX7 472 aa8.8□□□□□ -1
VAPB-201ENST00000265619 CAMK1DQ8IU85 385 aa8.8□□□□□ -1
VAPB-201ENST00000265619 MINDY2Q8NBR6 621 aa8.8□□□□□ -1
VAPB-201ENST00000265619 RPL3LQ92901 407 aaKnown RBP8.8□□□□□ -1
VAPB-201ENST00000265619 ACCSQ96QU6 501 aa8.8□□□□□ -1
VAPB-201ENST00000265619 PEBP4Q96S96 227 aa8.8□□□□□ -1
VAPB-201ENST00000265619 ADNPQ9H2P0 1102 aa8.8□□□□□ -1
VAPB-201ENST00000265619 JPH1Q9HDC5 661 aaPredicted RBP8.8□□□□□ -1
VAPB-201ENST00000265619 TNFRSF12AQ9NP84 129 aa8.8□□□□□ -1
VAPB-201ENST00000265619 MAT2BQ9NZL9 334 aa8.8□□□□□ -1
VAPB-201ENST00000265619 AASSQ9UDR5 926 aa8.8□□□□□ -1
VAPB-201ENST00000265619 DNMT3LQ9UJW3 386 aa8.8□□□□□ -1
VAPB-201ENST00000265619 POLHQ9Y253 713 aa8.8□□□□□ -1
VAPB-201ENST00000265619 CDY2AQ9Y6F7 541 aa8.8□□□□□ -1
VAPB-201ENST00000265619 CDY1Q9Y6F8 540 aa8.8□□□□□ -1
VAPB-201ENST00000265619 PCP4L1A6NKN8 68 aa8.8□□□□□ -1
VAPB-201ENST00000265619 C12orf71A8MTZ7 269 aa8.8□□□□□ -1
VAPB-201ENST00000265619 TK2O00142 265 aa8.8□□□□□ -1
VAPB-201ENST00000265619 RAD51BO15315 384 aa8.8□□□□□ -1
VAPB-201ENST00000265619 ERVK-10P10266 1014 aa8.8□□□□□ -1
VAPB-201ENST00000265619 MTHFD1P11586 935 aaKnown RBP8.8□□□□□ -1
VAPB-201ENST00000265619 TCF3P15923 654 aa8.8□□□□□ -1
VAPB-201ENST00000265619 JUNBP17275 347 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms