RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 SERPINB5P36952 375 aa25.28■■□□□ 1.64
TMEM55B-201ENST00000250489 RGRP47804 291 aa25.28■■□□□ 1.64
TMEM55B-201ENST00000250489 PTDSS1P48651 473 aaKnown RBP25.28■■□□□ 1.64
TMEM55B-201ENST00000250489 APLP1P51693 650 aa25.28■■□□□ 1.64
TMEM55B-201ENST00000250489 NSUN2Q08J23 767 aaKnown RBP eCLIP25.28■■□□□ 1.64
TMEM55B-201ENST00000250489 TRMT5Q32P41 509 aaKnown RBP25.28■■□□□ 1.64
TMEM55B-201ENST00000250489 KLC3Q6P597 504 aa25.28■■□□□ 1.64
TMEM55B-201ENST00000250489 TRIM67Q6ZTA4 783 aa25.28■■□□□ 1.64
TMEM55B-201ENST00000250489 GPR150Q8NGU9 434 aa25.28■■□□□ 1.64
TMEM55B-201ENST00000250489 STMN2Q93045 179 aa25.28■■□□□ 1.64
TMEM55B-201ENST00000250489 NSMCE3Q96MG7 304 aa25.28■■□□□ 1.64
TMEM55B-201ENST00000250489 OSBPL1AQ9BXW6 950 aa25.28■■□□□ 1.64
TMEM55B-201ENST00000250489 NUF2Q9BZD4 464 aa25.28■■□□□ 1.64
TMEM55B-201ENST00000250489 CYP4F11Q9HBI6 524 aa25.28■■□□□ 1.64
TMEM55B-201ENST00000250489 YIPF1Q9Y548 306 aa25.28■■□□□ 1.64
TMEM55B-201ENST00000250489 ILVBLA1L0T0 632 aa25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 CCDC162PA2VCL2 907 aa25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 NEMP1O14524 444 aa25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 GLP2RO95838 553 aa25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 RHOCP08134 193 aa25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 RPSAP08865 295 aaKnown RBP25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 RBP1P09455 135 aa25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 PIRTP0C851 137 aa25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 COX4I1P13073 169 aa25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 LSM12Q3MHD2 195 aaKnown RBP25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 FAM45BPQ6NSW5 357 aa25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 CHST9Q7L1S5 443 aa25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 KDM1BQ8NB78 822 aa25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 OR13C4Q8NGS5 318 aa25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 FAM45AQ8TCE6 357 aa25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 ANKRD27Q96NW4 1050 aa25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 RNF38Q9H0F5 515 aa25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 CD3EAPO15446 510 aaKnown RBP25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 SNUPNO95149 360 aaKnown RBP25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 SOD2P04179 222 aa25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 EPHA3P29320 983 aa25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 PLD1Q13393 1074 aa25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 RFTN1Q14699 578 aaPredicted RBP25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 ACAP2Q15057 778 aa25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 TPGS2Q68CL5 300 aa25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 TMEM207Q6UWW9 146 aa25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 RIPOR1Q6ZS17 1223 aa25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 WBP2Q969T9 261 aa25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 CCDC126Q96EE4 140 aa25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 PPP1R36Q96LQ0 422 aa25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 ZNF570Q96NI8 536 aa25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 PANX3Q96QZ0 392 aa25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 KLF16Q9BXK1 252 aaPredicted RBP25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 STOML1Q9UBI4 398 aa25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 AGO1Q9UL18 857 aaKnown RBP25.27■■□□□ 1.64
TMEM55B-201ENST00000250489 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP25.26■■□□□ 1.63
TMEM55B-201ENST00000250489 A8MT66 165 aa25.26■■□□□ 1.63
TMEM55B-201ENST00000250489 CR2P20023 1033 aa25.26■■□□□ 1.63
TMEM55B-201ENST00000250489 KCNA5P22460 613 aa25.26■■□□□ 1.63
TMEM55B-201ENST00000250489 SLC26A3P40879 764 aa25.26■■□□□ 1.63
TMEM55B-201ENST00000250489 ILF2Q12905 390 aaKnown RBP25.26■■□□□ 1.63
TMEM55B-201ENST00000250489 ZNF177Q13360 481 aaPredicted RBP25.26■■□□□ 1.63
TMEM55B-201ENST00000250489 C6orf163Q5TEZ5 329 aa25.26■■□□□ 1.63
TMEM55B-201ENST00000250489 SLC39A5Q6ZMH5 540 aa25.26■■□□□ 1.63
TMEM55B-201ENST00000250489 ACAD11Q709F0 780 aa25.26■■□□□ 1.63
TMEM55B-201ENST00000250489 TRMT2BQ96GJ1 504 aaKnown RBP25.26■■□□□ 1.63
TMEM55B-201ENST00000250489 CNDP1Q96KN2 507 aa25.26■■□□□ 1.63
TMEM55B-201ENST00000250489 CCDC28BQ9BUN5 200 aa25.26■■□□□ 1.63
TMEM55B-201ENST00000250489 CDYLQ9Y232 598 aa25.26■■□□□ 1.63
TMEM55B-201ENST00000250489 CRYL1Q9Y2S2 319 aa25.26■■□□□ 1.63
TMEM55B-201ENST00000250489 LOC100653049A0A140TA62 436 aa25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 A0A1B0GVM2 712 aa25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 TCAF2A6NFQ2 919 aa25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 KRT34O76011 436 aa25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 JUNP05412 331 aaKnown RBP25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 IRF1P10914 325 aa25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 GCKP35557 465 aa25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 ALDH1A3P47895 512 aa25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 IKBKEQ14164 716 aa25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 SEMA3AQ14563 771 aa25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 RALGPS1Q5JS13 557 aa25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 ADGRF1Q5T601 910 aa25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 MRNIPQ6NTE8 343 aa25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 ZNF549Q6P9A3 640 aa25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 FRMD7Q6ZUT3 714 aa25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 SETD3Q86TU7 594 aaPredicted RBP25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 C2orf78A6NCI8 922 aa25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 INSIG1O15503 277 aa25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 TSPAN3O60637 253 aa25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 IPO13O94829 963 aaKnown RBP25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 FDXRP22570 491 aa25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 ACTR3P61158 418 aa25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 DSG1Q02413 1049 aa25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 TLE2Q04725 743 aa25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 CCDC6Q16204 474 aa25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 PIM3Q86V86 326 aa25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 SH3RF2Q8TEC5 729 aa25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 RSRC1Q96IZ7 334 aaKnown RBP25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 EXOC2Q96KP1 924 aa25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 CYP4F12Q9HCS2 524 aa25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 STX18Q9P2W9 335 aaKnown RBP25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 CORO1CQ9ULV4 474 aaPredicted RBP25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 SSX2IPQ9Y2D8 614 aa25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 TBC1D30Q9Y2I9 924 aa25.25■■□□□ 1.63
TMEM55B-201ENST00000250489 SPO11Q9Y5K1 396 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms