RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Syvn1Q9DBY1 612 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Olfr704Q9EPF6 315 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Abcb10Q9JI39 715 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Osbpl8B9EJ86 889 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Nfatc2ipO09130 412 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Cxcr3O88410 367 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Camk2bP28652 542 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Cyp2c38P56655 490 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Nek10Q3UGM2 1111 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Fcho2Q3UQN2 809 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Ubtfl1Q3USZ2 394 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Prl2c1Q5SVL9 228 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Sema3dQ8BH34 777 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Mterf2Q8BKY8 385 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 D630039A03RikQ8K0M7 236 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Rpp40Q8R1F9 363 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Commd8Q9CZG3 183 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Taf8Q9EQH4 308 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 IkbkeQ9R0T8 717 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Gria3Q9Z2W9 888 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 CitP49025 2055 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 NsmafO35242 920 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 CaskO70589 926 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Anxa6P14824 673 aaKnown RBP11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Gga2Q6P5E6 603 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 NanogQ80Z64 305 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Rtfdc1Q99K95 307 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 AasdhpptQ9CQF6 309 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 PigkQ9CXY9 395 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Ddx59Q9DBN9 619 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 AadatQ9WVM8 425 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Clip3B9EHT4 547 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 PargO88622 969 aaKnown RBP11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Tbc1d10aP58802 500 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Baiap2Q8BKX1 535 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Ap3s2Q8BSZ2 193 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Zbtb6Q8K088 423 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Gfm2Q8R2Q4 779 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Cyp4f13Q99N19 523 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Gadd45gip1Q9CR59 222 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Pbdc1Q9D0B6 198 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Gdap2Q9DBL2 498 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Olfr706Q9EPF8 316 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Lima1Q9ERG0 753 aaKnown RBP11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 PpigA2AR02 752 aaKnown RBP11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Vmn2r51L7N215 852 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Inpp4bQ6P1Y8 924 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Gabra5Q8BHJ7 463 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Nat14Q8BVG8 206 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Usp17lbE9Q9U0 468 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Igf2bp1O88477 577 aaKnown RBP11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 MipP51180 263 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Stt3bQ3TDQ1 823 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Bcl2a1bQ497M6 172 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Hmgb4Q6P8W9 181 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 DaglaQ6WQJ1 1044 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Slc35a5Q921R7 437 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Vnn1Q9Z0K8 512 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Gadd45aP48316 165 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 ErfP70459 551 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Dlg1Q811D0 905 aaKnown RBP11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Mgat4aQ812G0 535 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Spef1Q99JL1 234 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 DguokQ9QX60 277 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Dnmt1P13864 1620 aaKnown RBP11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Vmn2r35E9Q7U8 861 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Rgsl1H3BL40 1073 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Syt4P40749 425 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 TsxP70675 144 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Q8BGK9 164 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Klhl36Q8R124 613 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Kif13aQ9EQW7 1749 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 KapP61110 121 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 NfixP70257 488 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Lrrc14bQ3UJB3 510 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 EregQ61521 162 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Galnt10Q6P9S7 603 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Scgb1c1Q7M742 95 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Zdhhc15Q8BGJ0 337 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Tmsb15lQ8C0W0 80 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Lars2Q8VDC0 902 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Zfp811A0A0J9YU71 552 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Cma1P21844 247 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 4930502E18RikQ14BQ3 236 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Rap1gap2Q5SVL6 712 aaKnown RBP11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Jazf1Q80ZQ5 243 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Fbxo21Q8VDH1 627 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 TfebQ9R210 475 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 DnmbpQ6TXD4 1580 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 MispQ9D279 648 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 NesQ6P5H2 1864 aaKnown RBP11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Ddx43D3Z6P9 646 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Olfr694K7N641 315 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 ApoeP08226 311 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Alox5P48999 674 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Olfr30Q8VGD8 315 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Mapk8Q91Y86 384 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Asb7Q91ZU0 318 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Ift27Q9D0P8 186 aa11.98□□□□□ -0.49
Trim56-201ENSMUST00000054384 Glipr1l1Q9DAG6 236 aa11.98□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms