RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 P01669 111 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Psme3P61290 254 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Timm13P62075 95 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Sap25Q1EHW4 186 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Gm5431Q5NCB3 844 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Catsper3Q80W99 395 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Nsl1Q8K305 281 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Atp6v1b1Q91YH6 513 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Rxfp2Q91ZZ5 737 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Klhl35Q9CZ49 574 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Rfc5Q9D0F6 339 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Plagl1Q9JLQ4 704 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Homer2Q9QWW1 354 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Dnaja2Q9QYJ0 412 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Adam17Q9Z0F8 827 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Prr14lE9Q7C4 1971 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Wdr81Q5ND34 1934 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Kcnt2D3Z649 1135 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Stam2O88811 523 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 HunkO88866 714 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Spp1P10923 294 aaKnown RBP15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Kcnc1P15388 511 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Il12bP43432 335 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 CcnfP51944 777 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Ext2P70428 718 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Fam131bQ3TY60 332 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Adora2aQ60613 410 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Hspa1aQ61696 641 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Mon1aQ6PDG8 556 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Olfr798Q7TRH8 311 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Olfr792Q7TRH9 311 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Dhx33Q80VY9 698 aaKnown RBP15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Hmgxb4Q80Y32 594 aaKnown RBP15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Ccdc90bQ8C3X2 256 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Bend5Q8C6D4 421 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Abhd11Q8K4F5 307 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Ak5Q920P5 562 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Haus8Q99L00 373 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Stx12Q9ER00 274 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Mpp6Q9JLB0 553 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Bscl2Q9Z2E9 383 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Eif2b3B1AUN2 452 aaKnown RBP15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Zfp780bE9Q2S6 806 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Vmn2r86G5E8Y4 848 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Cd4P06332 457 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Gucy2eP52785 1108 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Rbp1Q00915 135 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Uba1Q02053 1058 aaKnown RBP15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Zfp607aQ3TQG9 686 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Ntrk1Q3UFB7 799 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Afg1lQ3V384 480 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Ptpn14Q62130 1189 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 MyorgQ69ZQ1 716 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Ggnbp1Q6K1E7 370 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Dclk2Q6PGN3 756 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Zpbp2Q6X786 326 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Clec18aQ7TSQ1 534 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Sema3dQ8BH34 777 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Noc4lQ8BHY2 516 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Clec1aQ8BWY2 269 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Ipo13Q8K0C1 963 aa15.11■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Olfr292F8VQ84 308 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Gnrh1P13562 90 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Lhx3P50481 400 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Gpc4P51655 557 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Usp46P62069 366 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 YwhaqP68254 245 aaKnown RBP15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Zyg11bQ3UFS0 744 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Tead4Q62296 427 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Tdpoz3Q717B4 365 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Pnma8aQ80VM8 430 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Ccdc116Q80X53 541 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Gbp9Q8BTS3 619 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 LrgukQ9D5S7 820 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Pidd1Q9ERV7 915 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Cldn3Q9Z0G9 219 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Gm13212B1ASQ7 799 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Pate1E9Q658 125 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Gm20828J3KMI7 228 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Calhm3J3QMI4 347 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Atn1O35126 1175 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Tas2r16P59529 299 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Sppl2bQ3TD49 578 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Cyp2c66Q5GLZ0 490 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Nrg1Q6DR99 700 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Stmnd1Q6P3A1 279 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Cyp2d40Q6P8N9 338 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Mib1Q80SY4 1006 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 ChfrQ810L3 664 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 R3hcc1lQ8BJM3 775 aaKnown RBP15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Metap1Q8BP48 386 aaKnown RBP15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Nmur2Q8BZ39 395 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Aqp12Q8CHJ2 290 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Nle1Q8VEJ4 485 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Pip4k2cQ91XU3 421 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 IcmtQ9EQK7 283 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Zc3h4Q6ZPZ3 1304 aaKnown RBP15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Igkv5-43A0A0B4J1J2 115 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Lcn6A2AJB9 181 aa15.1■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 9330159F19RikD3Z623 648 aa15.1■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 173.1 ms