RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Tlx1P43345 332 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Jak1P52332 1153 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Rab10P61027 200 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 HdxQ14B70 692 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Rbm44Q3V089 1013 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Amigo1Q80ZD8 492 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Msantd1Q8BIL2 278 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Ticam2Q8BJQ4 232 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Dennd1cQ8CFK6 786 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Fuca2Q99KR8 461 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Rhox9Q9EQM5 227 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 CasrQ9QY96 1079 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Znf106O88466 1888 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Fpr-rs4A4FUQ5 323 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Mcpt1P11034 246 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Hmx2P43687 273 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Cntnap5bQ0V8T8 1292 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Gm1604bQ3TRG0 118 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Ceacam5Q3UKK2 947 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Lrrc8bQ5DU41 803 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Atp6v1g3Q8BMC1 118 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 TbcelQ8C5W3 424 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Lrrc66Q8K0B3 872 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 GrpQ8R1I2 146 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Pip4k2cQ91XU3 421 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Lyrm1Q9CQB7 122 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Ppp6cQ9CQR6 305 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Eef1akmt2Q9D853 244 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 NvlQ9DBY8 855 aaKnown RBP16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Cyb561d2Q9WUE3 222 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Zscan4eA0A1B0GRE8 505 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Gm3252E9PUT9 216 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Adamts14E9PX39 1209 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Spata31E9QAF0 1014 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Gm3468E9QAJ8 216 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Socs2O35717 198 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Ctbp1O88712 441 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 CcnoP0C242 352 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Tial1P70318 392 aaKnown RBP16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Ext2P70428 718 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Ncf4P97369 339 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Tmem102Q3UPR7 509 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Ankrd34bQ3UUF8 508 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Osbp2Q5QNQ6 908 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 MafkQ61827 156 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Ric8bQ80XE1 520 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Mppe1Q80XL7 396 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Fbxo21Q8VDH1 627 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Vps11Q91W86 941 aaKnown RBP16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Dlgap1Q9D415 992 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Hormad1Q9D5T7 392 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Rin2Q9D684 903 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Dbn1Q9QXS6 706 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Il18rapQ9Z2B1 614 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Igkv10-96A0A140T8M1 115 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Ccdc120A2AEV7 629 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Olfr1145A2AVC7 325 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Phkg1P07934 388 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Csf3rP40223 837 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Cdh9P70407 786 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Sox17Q61473 419 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 GpamQ61586 827 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Rasa4Q6PFQ7 802 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Olfr297Q7TS07 310 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Sytl5Q80T23 753 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Pcid2Q8BFV2 399 aaKnown RBP16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Abraxas1Q8BPZ8 407 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Frs2Q8C180 508 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Gspt1Q8R050 636 aaKnown RBP16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Slc35b2Q91ZN5 431 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Sdcbp2Q99JZ0 292 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Rgs10Q9CQE5 181 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Lrrc46Q9DAP0 323 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Gprc5dQ9JIL6 344 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 Cldn3Q9Z0G9 219 aa16.5■□□□□ 0.23
Shh-201ENSMUST00000002708 IsxA1A546 240 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Tmem233D3Z1U7 110 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Kcnk4O88454 398 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Kcnc1P15388 511 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Ctps2P70303 586 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 1700061G19RikQ08EE8 705 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Lsg1Q3UM18 644 aaKnown RBP16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Uimc1Q5U5Q9 727 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Znf423Q80TS5 1292 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Fam78aQ8C552 283 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Ddx18Q8K363 660 aaKnown RBP16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Tmco1Q921L3 188 aaKnown RBP16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Vps28Q9D1C8 221 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Cdkl2Q9QUK0 568 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Cdh13Q9WTR5 714 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Adam17Q9Z0F8 827 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Ighv11-2A0A075B5R8 117 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Zfp985A2A7A5 519 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Cntnap3E9PY62 1287 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Olfr1022L7MTT3 315 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 HunkO88866 714 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Got2P05202 430 aaKnown RBP16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Lim2P56563 173 aa16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Rpl26P61255 145 aaKnown RBP16.49■□□□□ 0.23
Shh-201ENSMUST00000002708 Adra1dP97714 562 aa16.49■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 36.9 ms