RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-223ENST00000640931 AMIGO2Q86SJ2 522 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 SETD3Q86TU7 594 aaPredicted RBP8.02□□□□□ -1.12
RTTN-223ENST00000640931 MTDHQ86UE4 582 aaKnown RBP8.02□□□□□ -1.12
RTTN-223ENST00000640931 ZNF354CQ86Y25 554 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 PALM2Q8IXS6 379 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 CPA6Q8N4T0 437 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 MRRFQ96E11 262 aaKnown RBP8.02□□□□□ -1.12
RTTN-223ENST00000640931 DCUN1D1Q96GG9 259 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 HES6Q96HZ4 224 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 GCNAQ96QF7 691 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 HERPUD2Q9BSE4 406 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 TRIM51Q9BSJ1 452 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 MRPL4Q9BYD3 311 aaKnown RBP8.02□□□□□ -1.12
RTTN-223ENST00000640931 FAM49AQ9H0Q0 323 aaPredicted RBP8.02□□□□□ -1.12
RTTN-223ENST00000640931 CDT1Q9H211 546 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 TMEM134Q9H6X4 195 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 RPF2Q9H7B2 306 aaKnown RBP8.02□□□□□ -1.12
RTTN-223ENST00000640931 CYP4F11Q9HBI6 524 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 ZDHHC18Q9NUE0 388 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 TJP2Q9UDY2 1190 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 PARP2Q9UGN5 583 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 EBF1Q9UH73 591 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 AMFRQ9UKV5 643 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 SMG5Q9UPR3 1016 aaKnown RBP8.02□□□□□ -1.12
RTTN-223ENST00000640931 AKT3Q9Y243 479 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 AP4B1Q9Y6B7 739 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 NRCAMQ92823 1304 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 PLXNB2O15031 1838 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 SIP14410 1827 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 MGAMO43451 1857 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 ARHGEF37A1IGU5 675 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 FAM187AA6NFU0 413 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 ASB14A6NK59 587 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 STMND1H3BQB6 276 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 DYNC1LI2O43237 492 aaPredicted RBP8.02□□□□□ -1.13
RTTN-223ENST00000640931 NOS1APO75052 506 aaPredicted RBP8.02□□□□□ -1.13
RTTN-223ENST00000640931 SEMA3DO95025 777 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 GH1P01241 217 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 NTRK1P04629 796 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 TCF4P15884 667 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 ITGALP20701 1170 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 SERPINB5P36952 375 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 HPCAL1P37235 193 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 HUNKP57058 714 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 GPC5P78333 572 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 CLDN10P78369 228 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 BEX3Q00994 111 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 BAMBIQ13145 260 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 CUL2Q13617 745 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 AMHR2Q16671 573 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 CLEC16AQ2KHT3 1053 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 ZNF568Q3ZCX4 644 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 UBAP2Q5T6F2 1119 aaKnown RBP8.02□□□□□ -1.13
RTTN-223ENST00000640931 ATF7IP2Q5U623 682 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 PRPF38BQ5VTL8 546 aaKnown RBP8.02□□□□□ -1.13
RTTN-223ENST00000640931 UGT3A1Q6NUS8 523 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 DRICH1Q6PGQ1 229 aaPredicted RBP8.02□□□□□ -1.13
RTTN-223ENST00000640931 ARSKQ6UWY0 536 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 PLEKHG7Q6ZR37 379 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 LINC00299Q6ZSB3 139 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 MILR1Q7Z6M3 343 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 HID1Q8IV36 788 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 ULK2Q8IYT8 1036 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 GANCQ8TET4 914 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 NKD2Q969F2 451 aaPredicted RBP8.02□□□□□ -1.13
RTTN-223ENST00000640931 TMIGD2Q96BF3 282 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 ART5Q96L15 291 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 HS3ST6Q96QI5 342 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 FAM118BQ9BPY3 351 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 C11orf70Q9BRQ4 267 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 SLC2A11Q9BYW1 496 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 TRIM31Q9BZY9 425 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 SDCBP2Q9H190 292 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 TMEM245Q9H330 911 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 RC3H2Q9HBD1 1191 aaKnown RBP8.02□□□□□ -1.13
RTTN-223ENST00000640931 PTPRHQ9HD43 1115 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 C1orf112Q9NSG2 853 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 DNMT3LQ9UJW3 386 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 ADAMTS6Q9UKP5 1117 aa8.02□□□□□ -1.13
RTTN-223ENST00000640931 A0A0A6YYK5 440 aaPredicted RBP8.01□□□□□ -1.13
RTTN-223ENST00000640931 CLDN25C9JDP6 229 aa8.01□□□□□ -1.13
RTTN-223ENST00000640931 GIPC1O14908 333 aa8.01□□□□□ -1.13
RTTN-223ENST00000640931 PMM2O15305 246 aa8.01□□□□□ -1.13
RTTN-223ENST00000640931 HBP1O60381 514 aa8.01□□□□□ -1.13
RTTN-223ENST00000640931 PRMT3O60678 531 aa8.01□□□□□ -1.13
RTTN-223ENST00000640931 TSC22D2O75157 780 aa8.01□□□□□ -1.13
RTTN-223ENST00000640931 GCATO75600 419 aa8.01□□□□□ -1.13
RTTN-223ENST00000640931 NADKO95544 446 aaPredicted RBP8.01□□□□□ -1.13
RTTN-223ENST00000640931 FGGP02679 453 aa8.01□□□□□ -1.13
RTTN-223ENST00000640931 MMP3P08254 477 aa8.01□□□□□ -1.13
RTTN-223ENST00000640931 KRT19P08727 400 aa8.01□□□□□ -1.13
RTTN-223ENST00000640931 SLC2A3P11169 496 aa8.01□□□□□ -1.13
RTTN-223ENST00000640931 RPS2P15880 293 aaKnown RBP8.01□□□□□ -1.13
RTTN-223ENST00000640931 CYP2B6P20813 491 aa8.01□□□□□ -1.13
RTTN-223ENST00000640931 DCKP27707 260 aa8.01□□□□□ -1.13
RTTN-223ENST00000640931 HLA-FP30511 346 aa8.01□□□□□ -1.13
RTTN-223ENST00000640931 HOXA6P31267 233 aa8.01□□□□□ -1.13
RTTN-223ENST00000640931 GJC1P36383 396 aa8.01□□□□□ -1.13
RTTN-223ENST00000640931 SLC18A1P54219 525 aa8.01□□□□□ -1.13
RTTN-223ENST00000640931 C21orf58P58505 322 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms