RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 ZNF189O75820 626 aaPredicted RBP13.28□□□□□ -0.28
GTF3A-209ENST00000640289 RHOBTB1O94844 696 aa13.28□□□□□ -0.28
GTF3A-209ENST00000640289 IGHV4-34P06331 123 aa13.28□□□□□ -0.28
GTF3A-209ENST00000640289 ALPIP09923 528 aa13.28□□□□□ -0.28
GTF3A-209ENST00000640289 ZSCAN5DPP0CG00 497 aa13.28□□□□□ -0.28
GTF3A-209ENST00000640289 COILP38432 576 aaPredicted RBP13.28□□□□□ -0.28
GTF3A-209ENST00000640289 CDK18Q07002 472 aa13.28□□□□□ -0.28
GTF3A-209ENST00000640289 OLIG2Q13516 323 aa13.28□□□□□ -0.28
GTF3A-209ENST00000640289 GALNT3Q14435 633 aa13.28□□□□□ -0.28
GTF3A-209ENST00000640289 SLC14A2Q15849 920 aa13.28□□□□□ -0.28
GTF3A-209ENST00000640289 CYP1B1Q16678 543 aa13.28□□□□□ -0.28
GTF3A-209ENST00000640289 P3H1Q32P28 736 aa13.28□□□□□ -0.28
GTF3A-209ENST00000640289 SEL1L3Q68CR1 1132 aa13.28□□□□□ -0.28
GTF3A-209ENST00000640289 CCDC137Q6PK04 289 aaKnown RBP13.28□□□□□ -0.28
GTF3A-209ENST00000640289 GSTA5Q7RTV2 222 aa13.28□□□□□ -0.28
GTF3A-209ENST00000640289 CADM4Q8NFZ8 388 aa13.28□□□□□ -0.28
GTF3A-209ENST00000640289 SPOCK2Q92563 424 aa13.28□□□□□ -0.28
GTF3A-209ENST00000640289 ZNF592Q92610 1267 aa13.28□□□□□ -0.28
GTF3A-209ENST00000640289 KLK6Q92876 244 aa13.28□□□□□ -0.28
GTF3A-209ENST00000640289 MRGPRX2Q96LB1 330 aa13.28□□□□□ -0.28
GTF3A-209ENST00000640289 TRIB3Q96RU7 358 aa13.28□□□□□ -0.28
GTF3A-209ENST00000640289 WRAP53Q9BUR4 548 aaKnown RBP13.28□□□□□ -0.28
GTF3A-209ENST00000640289 KDM4CQ9H3R0 1056 aa13.28□□□□□ -0.28
GTF3A-209ENST00000640289 EBF2Q9HAK2 575 aa13.28□□□□□ -0.28
GTF3A-209ENST00000640289 PREBQ9HCU5 417 aa13.28□□□□□ -0.28
GTF3A-209ENST00000640289 B4GALT6Q9UBX8 382 aa13.28□□□□□ -0.28
GTF3A-209ENST00000640289 PHTF1Q9UMS5 762 aa13.28□□□□□ -0.28
GTF3A-209ENST00000640289 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.28□□□□□ -0.28
GTF3A-209ENST00000640289 SLCO1B1Q9Y6L6 691 aa13.28□□□□□ -0.28
GTF3A-209ENST00000640289 GOLGA6L10A0A0M3HER8 536 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 A0A1W2PQ67 120 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 TSPAN6O43657 245 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 MMP20O60882 483 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 CA4P22748 312 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 ITPKAP23677 461 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 RPL22P35268 128 aaKnown RBP13.27□□□□□ -0.29
GTF3A-209ENST00000640289 MMP12P39900 470 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 PAFAH1B1P43034 410 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 EPHB1P54762 984 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 GEMP55040 296 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 WNT3AP56704 352 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 POLR2LP62875 67 aaKnown RBP13.27□□□□□ -0.29
GTF3A-209ENST00000640289 ELP6Q0PNE2 266 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 RALGDSQ12967 914 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 MPP3Q13368 585 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 TRIP13Q15645 432 aaPredicted RBP13.27□□□□□ -0.29
GTF3A-209ENST00000640289 PARP6Q2NL67 630 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 TMEM52BQ4KMG9 183 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 SPDYCQ5MJ68 293 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 SYCP2LQ5T4T6 812 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 LYSMD4Q5XG99 296 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 ERAP2Q6P179 960 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 TRIM69Q86WT6 500 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 HORMAD1Q86X24 394 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 CCDC89Q8N998 374 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 IPMKQ8NFU5 416 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 ATL2Q8NHH9 583 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 FOXJ1Q92949 421 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 RMDN1Q96DB5 314 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 IFT43Q96FT9 208 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 FEM1CQ96JP0 617 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 DDX47Q9H0S4 455 aaKnown RBP13.27□□□□□ -0.29
GTF3A-209ENST00000640289 PCED1AQ9H1Q7 454 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 VPS45Q9NRW7 570 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 TMEM74BQ9NUR3 256 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 EIF2B4Q9UI10 523 aaKnown RBP13.27□□□□□ -0.29
GTF3A-209ENST00000640289 RAB23Q9ULC3 237 aa13.27□□□□□ -0.29
GTF3A-209ENST00000640289 A0A0J9YYE9 177 aa13.26□□□□□ -0.29
GTF3A-209ENST00000640289 IGLON5A6NGN9 336 aa13.26□□□□□ -0.29
GTF3A-209ENST00000640289 NPIPB15A6NHN6 443 aaPredicted RBP13.26□□□□□ -0.29
GTF3A-209ENST00000640289 ANXA9O76027 345 aa13.26□□□□□ -0.29
GTF3A-209ENST00000640289 AGTP01019 485 aa13.26□□□□□ -0.29
GTF3A-209ENST00000640289 TRBC1P01850 177 aa13.26□□□□□ -0.29
GTF3A-209ENST00000640289 LMNAP02545 664 aaKnown RBP13.26□□□□□ -0.29
GTF3A-209ENST00000640289 LHCGRP22888 699 aa13.26□□□□□ -0.29
GTF3A-209ENST00000640289 ACTN2P35609 894 aa13.26□□□□□ -0.29
GTF3A-209ENST00000640289 HNF1BP35680 557 aa13.26□□□□□ -0.29
GTF3A-209ENST00000640289 CHRNA4P43681 627 aa13.26□□□□□ -0.29
GTF3A-209ENST00000640289 CCR5P51681 352 aa13.26□□□□□ -0.29
GTF3A-209ENST00000640289 SUOXP51687 545 aa13.26□□□□□ -0.29
GTF3A-209ENST00000640289 CREB5Q02930 508 aa13.26□□□□□ -0.29
GTF3A-209ENST00000640289 FGL2Q14314 439 aa13.26□□□□□ -0.29
GTF3A-209ENST00000640289 SPARCL1Q14515 664 aa13.26□□□□□ -0.29
GTF3A-209ENST00000640289 PRPSAP1Q14558 356 aa13.26□□□□□ -0.29
GTF3A-209ENST00000640289 QPCTQ16769 361 aa13.26□□□□□ -0.29
GTF3A-209ENST00000640289 TMEM259Q4ZIN3 620 aa13.26□□□□□ -0.29
GTF3A-209ENST00000640289 DPPA4Q7L190 304 aa13.26□□□□□ -0.29
GTF3A-209ENST00000640289 TSPAN33Q86UF1 283 aa13.26□□□□□ -0.29
GTF3A-209ENST00000640289 KLHL7Q8IXQ5 586 aa13.26□□□□□ -0.29
GTF3A-209ENST00000640289 RGL4Q8IZJ4 473 aa13.26□□□□□ -0.29
GTF3A-209ENST00000640289 SLC25A41Q8N5S1 370 aa13.26□□□□□ -0.29
GTF3A-209ENST00000640289 CXorf40AQ8TE69 158 aa13.26□□□□□ -0.29
GTF3A-209ENST00000640289 SCRN2Q96FV2 425 aa13.26□□□□□ -0.29
GTF3A-209ENST00000640289 MCCC1Q96RQ3 725 aaPredicted RBP13.26□□□□□ -0.29
GTF3A-209ENST00000640289 APOL2Q9BQE5 337 aa13.26□□□□□ -0.29
GTF3A-209ENST00000640289 ORAI3Q9BRQ5 295 aa13.26□□□□□ -0.29
GTF3A-209ENST00000640289 FICDQ9BVA6 458 aa13.26□□□□□ -0.29
GTF3A-209ENST00000640289 ETNK1Q9HBU6 452 aa13.26□□□□□ -0.29
GTF3A-209ENST00000640289 COQ6Q9Y2Z9 468 aa13.26□□□□□ -0.29
GTF3A-209ENST00000640289 PPIL1Q9Y3C6 166 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms