RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 SERTAD4-AS1Q5TG53 156 aa5.3□□□□□ -1.56
TRAPPC9-216ENST00000634178 PDXDC1Q6P996 788 aa5.3□□□□□ -1.56
TRAPPC9-216ENST00000634178 KLHL35Q6PF15 583 aa5.3□□□□□ -1.56
TRAPPC9-216ENST00000634178 PRPF39Q86UA1 669 aaKnown RBP5.3□□□□□ -1.56
TRAPPC9-216ENST00000634178 FAM160B2Q86V87 743 aa5.3□□□□□ -1.56
TRAPPC9-216ENST00000634178 IGFN1Q86VF2 1251 aa5.3□□□□□ -1.56
TRAPPC9-216ENST00000634178 TICAM1Q8IUC6 712 aa5.3□□□□□ -1.56
TRAPPC9-216ENST00000634178 ADGRF2Q8IZF7 708 aa5.3□□□□□ -1.56
TRAPPC9-216ENST00000634178 AMER2Q8N7J2 671 aa5.3□□□□□ -1.56
TRAPPC9-216ENST00000634178 EXD3Q8N9H8 876 aa5.3□□□□□ -1.56
TRAPPC9-216ENST00000634178 CMTM3Q96MX0 182 aa5.3□□□□□ -1.56
TRAPPC9-216ENST00000634178 ZNF347Q96SE7 839 aa5.3□□□□□ -1.56
TRAPPC9-216ENST00000634178 TIMP4Q99727 224 aa5.3□□□□□ -1.56
TRAPPC9-216ENST00000634178 SLF1Q9BQI6 1058 aa5.3□□□□□ -1.56
TRAPPC9-216ENST00000634178 STRA6Q9BX79 667 aa5.3□□□□□ -1.56
TRAPPC9-216ENST00000634178 KRTAP3-1Q9BYR8 98 aa5.3□□□□□ -1.56
TRAPPC9-216ENST00000634178 Q9N2J8 555 aa5.3□□□□□ -1.56
TRAPPC9-216ENST00000634178 C20orf141Q9NUB4 165 aa5.3□□□□□ -1.56
TRAPPC9-216ENST00000634178 GRHL1Q9NZI5 618 aa5.3□□□□□ -1.56
TRAPPC9-216ENST00000634178 NCKIPSDQ9NZQ3 722 aa5.3□□□□□ -1.56
TRAPPC9-216ENST00000634178 SH3BP4Q9P0V3 963 aa5.3□□□□□ -1.56
TRAPPC9-216ENST00000634178 HDAC6Q9UBN7 1215 aa5.3□□□□□ -1.56
TRAPPC9-216ENST00000634178 A4GNTQ9UNA3 340 aa5.3□□□□□ -1.56
TRAPPC9-216ENST00000634178 PCDHGB5Q9Y5G0 923 aa5.3□□□□□ -1.56
TRAPPC9-216ENST00000634178 C4AP0C0L4 1744 aa5.3□□□□□ -1.56
TRAPPC9-216ENST00000634178 ZNF831Q5JPB2 1677 aa5.3□□□□□ -1.56
TRAPPC9-216ENST00000634178 POLR2AP24928 1970 aaKnown RBP5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 A0A0G2JLW4 131 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 A0A1W2PRG0 241 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 PABPN1LA6NDY0 278 aaKnown RBP5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 AGAP14A8MT82 685 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 C17orf100A8MU93 164 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 C1QTNF3-AMACRE9PGA6 284 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 P4HA2O15460 535 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 MSI1O43347 362 aaKnown RBP5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 FOXD2O60548 495 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 MMP10P09238 476 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 WT1P19544 449 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 ICAM3P32942 547 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 IDUAP35475 653 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 NNMTP40261 264 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 EFEMP1Q12805 493 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 STK4Q13043 487 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 GALNT3Q14435 633 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 PUM1Q14671 1186 aaKnown RBP eCLIP5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 VEPH1Q14D04 833 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 MED22Q15528 200 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 ARL13AQ5H913 290 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 GPR139Q6DWJ6 353 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 HMBOX1Q6NT76 420 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 SLC30A6Q6NXT4 461 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 CPLX2Q6PUV4 134 aaKnown RBP5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 C17orf53Q8N3J3 647 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 TMEM116Q8NCL8 245 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 SH3RF3Q8TEJ3 882 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 PIGKQ92643 395 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 UROC1Q96N76 676 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 MACROD1Q9BQ69 325 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 LBHD1Q9BQE6 289 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 ZNF341Q9BYN7 854 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 MMRN2Q9H8L6 949 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 FBRSL1Q9HCM7 1045 aaKnown RBP5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 SNTG1Q9NSN8 517 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 ATP8A2Q9NTI2 1148 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 MORF4L1Q9UBU8 362 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 HSPB7Q9UBY9 170 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 HAO1Q9UJM8 370 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 ICKQ9UPZ9 632 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 ITGB4P16144 1822 aa5.29□□□□□ -1.56
TRAPPC9-216ENST00000634178 EVC2Q86UK5 1308 aa5.28□□□□□ -1.56
TRAPPC9-216ENST00000634178 CD163L1Q9NR16 1453 aa5.28□□□□□ -1.56
TRAPPC9-216ENST00000634178 THSD7BQ9C0I4 1608 aa5.28□□□□□ -1.56
TRAPPC9-216ENST00000634178 TCRBV7S3A2A0A539 114 aa5.28□□□□□ -1.56
TRAPPC9-216ENST00000634178 TARM1B6A8C7 271 aa5.28□□□□□ -1.56
TRAPPC9-216ENST00000634178 USP17L23D6RBM5 183 aa5.28□□□□□ -1.56
TRAPPC9-216ENST00000634178 DKC1O60832 514 aaKnown RBP eCLIP5.28□□□□□ -1.56
TRAPPC9-216ENST00000634178 NFATC1O95644 943 aa5.28□□□□□ -1.56
TRAPPC9-216ENST00000634178 CD63P08962 238 aa5.28□□□□□ -1.56
TRAPPC9-216ENST00000634178 HOXB5P09067 269 aa5.28□□□□□ -1.56
TRAPPC9-216ENST00000634178 NR2F1P10589 423 aa5.28□□□□□ -1.56
TRAPPC9-216ENST00000634178 CYP2D6P10635 497 aa5.28□□□□□ -1.56
TRAPPC9-216ENST00000634178 HSPA8P11142 646 aaKnown RBP5.28□□□□□ -1.56
TRAPPC9-216ENST00000634178 SLC2A4P14672 509 aa5.28□□□□□ -1.56
TRAPPC9-216ENST00000634178 DPEP1P16444 411 aa5.28□□□□□ -1.56
TRAPPC9-216ENST00000634178 PTPN2P17706 415 aa5.28□□□□□ -1.56
TRAPPC9-216ENST00000634178 TFEBP19484 476 aa5.28□□□□□ -1.56
TRAPPC9-216ENST00000634178 SAT1P21673 171 aa5.28□□□□□ -1.56
TRAPPC9-216ENST00000634178 GPD1P21695 349 aa5.28□□□□□ -1.56
TRAPPC9-216ENST00000634178 YWHAQP27348 245 aa5.28□□□□□ -1.56
TRAPPC9-216ENST00000634178 TTKP33981 857 aa5.28□□□□□ -1.56
TRAPPC9-216ENST00000634178 MCM7P33993 719 aa5.28□□□□□ -1.56
TRAPPC9-216ENST00000634178 PTGER1P34995 402 aa5.28□□□□□ -1.56
TRAPPC9-216ENST00000634178 HADHAP40939 763 aa5.28□□□□□ -1.56
TRAPPC9-216ENST00000634178 SOX2P48431 317 aa5.28□□□□□ -1.56
TRAPPC9-216ENST00000634178 LBX1P52954 281 aa5.28□□□□□ -1.56
TRAPPC9-216ENST00000634178 SLC12A2P55011 1212 aa5.28□□□□□ -1.56
TRAPPC9-216ENST00000634178 MAP2K1Q02750 393 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC9-216ENST00000634178 NIPAL4Q0D2K0 466 aa5.28□□□□□ -1.56
TRAPPC9-216ENST00000634178 FOXI1Q12951 378 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms