RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 XAF1Q6GPH4 301 aa10.44□□□□□ -0.74
VPS11-207ENST00000620429 ZNF544Q6NX49 715 aa10.44□□□□□ -0.74
VPS11-207ENST00000620429 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.44□□□□□ -0.74
VPS11-207ENST00000620429 ATG14Q6ZNE5 492 aa10.44□□□□□ -0.74
VPS11-207ENST00000620429 SLCO6A1Q86UG4 719 aa10.44□□□□□ -0.74
VPS11-207ENST00000620429 SLC35B2Q8TB61 432 aa10.44□□□□□ -0.74
VPS11-207ENST00000620429 RSAD2Q8WXG1 361 aa10.44□□□□□ -0.74
VPS11-207ENST00000620429 SEPT8Q92599 483 aa10.44□□□□□ -0.74
VPS11-207ENST00000620429 LPAR1Q92633 364 aa10.44□□□□□ -0.74
VPS11-207ENST00000620429 CEP170P1Q96L14 293 aa10.44□□□□□ -0.74
VPS11-207ENST00000620429 BCL7BQ9BQE9 202 aa10.44□□□□□ -0.74
VPS11-207ENST00000620429 MTMR12Q9C0I1 747 aa10.44□□□□□ -0.74
VPS11-207ENST00000620429 PNPLA8Q9NP80 782 aa10.44□□□□□ -0.74
VPS11-207ENST00000620429 TIGARQ9NQ88 270 aa10.44□□□□□ -0.74
VPS11-207ENST00000620429 TCEAL9Q9UHQ7 104 aa10.44□□□□□ -0.74
VPS11-207ENST00000620429 ABT1Q9ULW3 272 aaKnown RBP10.44□□□□□ -0.74
VPS11-207ENST00000620429 PCDHGC3Q9UN70 934 aa10.44□□□□□ -0.74
VPS11-207ENST00000620429 DGKBQ9Y6T7 804 aa10.44□□□□□ -0.74
VPS11-207ENST00000620429 A0A0X1KG70 313 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 TCRBV3S1A0A5B6 114 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 C9IYK1 514 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 PEX10O60683 326 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 TOM1L1O75674 476 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 WEE2P0C1S8 567 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 FGF3P11487 239 aaPredicted RBP10.43□□□□□ -0.74
VPS11-207ENST00000620429 CKMT2P17540 419 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 ACO1P21399 889 aaKnown RBP10.43□□□□□ -0.74
VPS11-207ENST00000620429 RPS12P25398 132 aaKnown RBP10.43□□□□□ -0.74
VPS11-207ENST00000620429 ATICP31939 592 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 EIF2DP41214 584 aaKnown RBP10.43□□□□□ -0.74
VPS11-207ENST00000620429 DPP6P42658 865 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 PSMD8P48556 350 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 ALDH7A1P49419 539 aaKnown RBP10.43□□□□□ -0.74
VPS11-207ENST00000620429 GHRHRQ02643 423 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 SNTA1Q13424 505 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 PGM5Q15124 567 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 MAPK11Q15759 364 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 HIST2H2ACQ16777 129 aaPredicted RBP10.43□□□□□ -0.74
VPS11-207ENST00000620429 ZNF181Q2M3W8 571 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 ESCO2Q56NI9 601 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 CLVS2Q5SYC1 327 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 CCNYL2Q5T2Q4 361 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 LGSNQ5TDP6 509 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 SLC9A4Q6AI14 798 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 DNAJC24Q6P3W2 148 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 SLC16A12Q6ZSM3 486 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 RIOX2Q8IUF8 465 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.43□□□□□ -0.74
VPS11-207ENST00000620429 BSNDQ8WZ55 320 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 MMP19Q99542 508 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 LHPPQ9H008 270 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 CCSER2Q9H7U1 834 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 NOL11Q9H8H0 719 aaKnown RBP10.43□□□□□ -0.74
VPS11-207ENST00000620429 WDR41Q9HAD4 459 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 RPRD1BQ9NQG5 326 aaKnown RBP10.43□□□□□ -0.74
VPS11-207ENST00000620429 PCDHGB3Q9Y5G1 929 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 INO80B-WBP1J3KQ70 363 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 CCNE2O96020 404 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 GSRP00390 522 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 DBTP11182 482 aaKnown RBP10.43□□□□□ -0.74
VPS11-207ENST00000620429 MX2P20592 715 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 GLDCP23378 1020 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 ELK3P41970 407 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 HMGCS2P54868 508 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 OGDHQ02218 1023 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 CUL2Q13617 745 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 TNFAIP1Q13829 316 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 BAATQ14032 418 aaPredicted RBP10.43□□□□□ -0.74
VPS11-207ENST00000620429 FASTKD1Q53R41 847 aaKnown RBP10.43□□□□□ -0.74
VPS11-207ENST00000620429 LRRC38Q5VT99 294 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 CRTC3Q6UUV7 619 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 C15orf39Q6ZRI6 1047 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 CDR2LQ86X02 465 aaPredicted RBP10.43□□□□□ -0.74
VPS11-207ENST00000620429 SAMD14Q8IZD0 417 aaPredicted RBP10.43□□□□□ -0.74
VPS11-207ENST00000620429 TDRD5Q8NAT2 981 aaKnown RBP10.43□□□□□ -0.74
VPS11-207ENST00000620429 LEMD2Q8NC56 503 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 IL17RDQ8NFM7 739 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 RHOXF1Q8NHV9 184 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 TRPM4Q8TD43 1214 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 FERD3LQ96RJ6 166 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 LPIN3Q9BQK8 851 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 MRPL40Q9NQ50 206 aaKnown RBP10.43□□□□□ -0.74
VPS11-207ENST00000620429 DDX28Q9NUL7 540 aaKnown RBP10.43□□□□□ -0.74
VPS11-207ENST00000620429 ACOXLQ9NUZ1 547 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 TOR4AQ9NXH8 423 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 RAD54BQ9Y620 910 aa10.43□□□□□ -0.74
VPS11-207ENST00000620429 PAPSS1O43252 624 aaPredicted RBP10.42□□□□□ -0.74
VPS11-207ENST00000620429 CST8O60676 142 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 SLITRK5O94991 958 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 LYPLA2O95372 231 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 C1QAP02745 245 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 ARNTP27540 789 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 DDOSTP39656 456 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 HTR2BP41595 481 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 SERPINB10P48595 397 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 ETV1P50549 477 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 PLA2G16P53816 162 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 MLLT1Q03111 559 aaPredicted RBP10.42□□□□□ -0.74
VPS11-207ENST00000620429 NOGQ13253 232 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 TRIM25Q14258 630 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms