RNA–Protein interactions for RNA: ENST00000615096.4

SCUBE1-208, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 2 BASIC

Gene SCUBE1, Length 1,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-208ENST00000615096 IPMKQ8NFU5 416 aa22.32■■□□□ 1.16
SCUBE1-208ENST00000615096 IFT43Q96FT9 208 aa22.32■■□□□ 1.16
SCUBE1-208ENST00000615096 KRT12Q99456 494 aa22.32■■□□□ 1.16
SCUBE1-208ENST00000615096 PCDH12Q9NPG4 1184 aa22.32■■□□□ 1.16
SCUBE1-208ENST00000615096 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.31■■□□□ 1.16
SCUBE1-208ENST00000615096 RIOK3O14730 519 aaKnown RBP22.31■■□□□ 1.16
SCUBE1-208ENST00000615096 SEMA4FO95754 770 aa22.31■■□□□ 1.16
SCUBE1-208ENST00000615096 NDST3O95803 873 aa22.31■■□□□ 1.16
SCUBE1-208ENST00000615096 PRKCGP05129 697 aa22.31■■□□□ 1.16
SCUBE1-208ENST00000615096 ATXN1LP0C7T5 689 aaKnown RBP22.31■■□□□ 1.16
SCUBE1-208ENST00000615096 XPAP23025 273 aaPredicted RBP22.31■■□□□ 1.16
SCUBE1-208ENST00000615096 DR1Q01658 176 aa22.31■■□□□ 1.16
SCUBE1-208ENST00000615096 RANBP10Q6VN20 620 aa22.31■■□□□ 1.16
SCUBE1-208ENST00000615096 PDCD7Q8N8D1 485 aaKnown RBP22.31■■□□□ 1.16
SCUBE1-208ENST00000615096 OR2T34Q8NGX1 318 aa22.31■■□□□ 1.16
SCUBE1-208ENST00000615096 SCRN2Q96FV2 425 aa22.31■■□□□ 1.16
SCUBE1-208ENST00000615096 MCCC1Q96RQ3 725 aaPredicted RBP22.31■■□□□ 1.16
SCUBE1-208ENST00000615096 GPR174Q9BXC1 333 aa22.31■■□□□ 1.16
SCUBE1-208ENST00000615096 ADGRE3Q9BY15 652 aa22.31■■□□□ 1.16
SCUBE1-208ENST00000615096 KCNH6Q9H252 994 aa22.31■■□□□ 1.16
SCUBE1-208ENST00000615096 GGT7Q9UJ14 662 aa22.31■■□□□ 1.16
SCUBE1-208ENST00000615096 ITM2BQ9Y287 266 aa22.31■■□□□ 1.16
SCUBE1-208ENST00000615096 A0A0J9YYE9 177 aa22.3■■□□□ 1.16
SCUBE1-208ENST00000615096 GOLGA6CA6NDK9 693 aa22.3■■□□□ 1.16
SCUBE1-208ENST00000615096 GOLGA6BA6NDN3 693 aa22.3■■□□□ 1.16
SCUBE1-208ENST00000615096 ANKRD66B4E2M5 251 aa22.3■■□□□ 1.16
SCUBE1-208ENST00000615096 PSMD3O43242 534 aa22.3■■□□□ 1.16
SCUBE1-208ENST00000615096 AP2A1O95782 977 aa22.3■■□□□ 1.16
SCUBE1-208ENST00000615096 AGTP01019 485 aa22.3■■□□□ 1.16
SCUBE1-208ENST00000615096 TRBC1P01850 177 aa22.3■■□□□ 1.16
SCUBE1-208ENST00000615096 GOLGA6DP0CG33 693 aa22.3■■□□□ 1.16
SCUBE1-208ENST00000615096 GRIA4P48058 902 aa22.3■■□□□ 1.16
SCUBE1-208ENST00000615096 EPHB1P54762 984 aa22.3■■□□□ 1.16
SCUBE1-208ENST00000615096 ELP6Q0PNE2 266 aa22.3■■□□□ 1.16
SCUBE1-208ENST00000615096 OLIG2Q13516 323 aa22.3■■□□□ 1.16
SCUBE1-208ENST00000615096 PTK6Q13882 451 aa22.3■■□□□ 1.16
SCUBE1-208ENST00000615096 DHX34Q14147 1143 aaKnown RBP22.3■■□□□ 1.16
SCUBE1-208ENST00000615096 GALNT3Q14435 633 aa22.3■■□□□ 1.16
SCUBE1-208ENST00000615096 PTPRRQ15256 657 aa22.3■■□□□ 1.16
SCUBE1-208ENST00000615096 QPCTQ16769 361 aa22.3■■□□□ 1.16
SCUBE1-208ENST00000615096 SYDE1Q6ZW31 735 aaPredicted RBP22.3■■□□□ 1.16
SCUBE1-208ENST00000615096 SMIM14Q96QK8 99 aa22.3■■□□□ 1.16
SCUBE1-208ENST00000615096 FICDQ9BVA6 458 aa22.3■■□□□ 1.16
SCUBE1-208ENST00000615096 FSD1LQ9BXM9 530 aa22.3■■□□□ 1.16
SCUBE1-208ENST00000615096 PREBQ9HCU5 417 aa22.3■■□□□ 1.16
SCUBE1-208ENST00000615096 GOLGA6AQ9NYA3 693 aa22.3■■□□□ 1.16
SCUBE1-208ENST00000615096 LRRC72A6NJI9 287 aa22.29■■□□□ 1.16
SCUBE1-208ENST00000615096 ERI2A8K979 691 aaKnown RBP22.29■■□□□ 1.16
SCUBE1-208ENST00000615096 TSPAN6O43657 245 aa22.29■■□□□ 1.16
SCUBE1-208ENST00000615096 NDUFS2O75306 463 aa22.29■■□□□ 1.16
SCUBE1-208ENST00000615096 CTPS1P17812 591 aa22.29■■□□□ 1.16
SCUBE1-208ENST00000615096 MMP12P39900 470 aa22.29■■□□□ 1.16
SCUBE1-208ENST00000615096 CHRNA4P43681 627 aa22.29■■□□□ 1.16
SCUBE1-208ENST00000615096 VPS41P49754 854 aa22.29■■□□□ 1.16
SCUBE1-208ENST00000615096 GPS1Q13098 491 aa22.29■■□□□ 1.16
SCUBE1-208ENST00000615096 SPARCL1Q14515 664 aa22.29■■□□□ 1.16
SCUBE1-208ENST00000615096 PPP1R7Q15435 360 aa22.29■■□□□ 1.16
SCUBE1-208ENST00000615096 SLC1A5Q15758 541 aa22.29■■□□□ 1.16
SCUBE1-208ENST00000615096 TMEM52BQ4KMG9 183 aa22.29■■□□□ 1.16
SCUBE1-208ENST00000615096 SIRPB2Q5JXA9 342 aa22.29■■□□□ 1.16
SCUBE1-208ENST00000615096 ERAP2Q6P179 960 aa22.29■■□□□ 1.16
SCUBE1-208ENST00000615096 NEK5Q6P3R8 708 aa22.29■■□□□ 1.16
SCUBE1-208ENST00000615096 DPPA4Q7L190 304 aa22.29■■□□□ 1.16
SCUBE1-208ENST00000615096 C11orf74Q86VG3 221 aa22.29■■□□□ 1.16
SCUBE1-208ENST00000615096 JAMLQ86YT9 394 aa22.29■■□□□ 1.16
SCUBE1-208ENST00000615096 NDUFAF2Q8N183 169 aa22.29■■□□□ 1.16
SCUBE1-208ENST00000615096 RMDN1Q96DB5 314 aa22.29■■□□□ 1.16
SCUBE1-208ENST00000615096 PCED1AQ9H1Q7 454 aa22.29■■□□□ 1.16
SCUBE1-208ENST00000615096 C6orf106Q9H6K1 298 aaPredicted RBP22.29■■□□□ 1.16
SCUBE1-208ENST00000615096 LRRC40Q9H9A6 602 aa22.29■■□□□ 1.16
SCUBE1-208ENST00000615096 B4GALT6Q9UBX8 382 aa22.29■■□□□ 1.16
SCUBE1-208ENST00000615096 TBC1D3DA0A087WVF3 549 aa22.28■■□□□ 1.16
SCUBE1-208ENST00000615096 TBC1D3IA0A087WXS9 549 aa22.28■■□□□ 1.16
SCUBE1-208ENST00000615096 TBC1D3EA0A087X179 549 aa22.28■■□□□ 1.16
SCUBE1-208ENST00000615096 TBC1D3KA0A087X1G2 549 aa22.28■■□□□ 1.16
SCUBE1-208ENST00000615096 TBC1D3FA6NER0 549 aaPredicted RBP22.28■■□□□ 1.16
SCUBE1-208ENST00000615096 FAM47DPA6NHR8 397 aa22.28■■□□□ 1.16
SCUBE1-208ENST00000615096 TBC1D3LB9A6J9 549 aa22.28■■□□□ 1.16
SCUBE1-208ENST00000615096 TTI1O43156 1089 aa22.28■■□□□ 1.16
SCUBE1-208ENST00000615096 MAP3K13O43283 966 aa22.28■■□□□ 1.16
SCUBE1-208ENST00000615096 SUN1O94901 812 aa22.28■■□□□ 1.16
SCUBE1-208ENST00000615096 ALPIP09923 528 aa22.28■■□□□ 1.16
SCUBE1-208ENST00000615096 TBC1D3HP0C7X1 549 aa22.28■■□□□ 1.16
SCUBE1-208ENST00000615096 HLA-DPA1P20036 260 aa22.28■■□□□ 1.16
SCUBE1-208ENST00000615096 HNF1BP35680 557 aa22.28■■□□□ 1.16
SCUBE1-208ENST00000615096 FAM193AP78312 1265 aa22.28■■□□□ 1.16
SCUBE1-208ENST00000615096 BASP1P80723 227 aaKnown RBP22.28■■□□□ 1.16
SCUBE1-208ENST00000615096 SEMG2Q02383 582 aa22.28■■□□□ 1.16
SCUBE1-208ENST00000615096 RPL6Q02878 288 aaKnown RBP22.28■■□□□ 1.16
SCUBE1-208ENST00000615096 RALGDSQ12967 914 aa22.28■■□□□ 1.16
SCUBE1-208ENST00000615096 SYCP2LQ5T4T6 812 aa22.28■■□□□ 1.16
SCUBE1-208ENST00000615096 TBC1D3GQ6DHY5 549 aa22.28■■□□□ 1.16
SCUBE1-208ENST00000615096 TBC1D3CQ6IPX1 549 aa22.28■■□□□ 1.16
SCUBE1-208ENST00000615096 DENND5AQ6IQ26 1287 aa22.28■■□□□ 1.16
SCUBE1-208ENST00000615096 USP45Q70EL2 814 aa22.28■■□□□ 1.16
SCUBE1-208ENST00000615096 TBC1D3Q8IZP1 549 aaPredicted RBP22.28■■□□□ 1.16
SCUBE1-208ENST00000615096 CADM4Q8NFZ8 388 aa22.28■■□□□ 1.16
SCUBE1-208ENST00000615096 LYSMD1Q96S90 227 aa22.28■■□□□ 1.16
SCUBE1-208ENST00000615096 TBL1YQ9BQ87 522 aa22.28■■□□□ 1.16
SCUBE1-208ENST00000615096 ARNT2Q9HBZ2 717 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms