RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 MNS1Q8NEH6 495 aa20.14■□□□□ 0.81
SHKBP1-222ENST00000600320 PCDH12Q9NPG4 1184 aa20.14■□□□□ 0.81
SHKBP1-222ENST00000600320 MBD1Q9UIS9 605 aaPredicted RBP20.14■□□□□ 0.81
SHKBP1-222ENST00000600320 GGT7Q9UJ14 662 aa20.14■□□□□ 0.81
SHKBP1-222ENST00000600320 PHTF1Q9UMS5 762 aa20.14■□□□□ 0.81
SHKBP1-222ENST00000600320 HCN4Q9Y3Q4 1203 aa20.14■□□□□ 0.81
SHKBP1-222ENST00000600320 FADS3Q9Y5Q0 445 aa20.14■□□□□ 0.81
SHKBP1-222ENST00000600320 A0A1W2PQ67 120 aa20.13■□□□□ 0.81
SHKBP1-222ENST00000600320 AREL1O15033 823 aa20.13■□□□□ 0.81
SHKBP1-222ENST00000600320 SLC7A4O43246 635 aa20.13■□□□□ 0.81
SHKBP1-222ENST00000600320 USP12O75317 370 aa20.13■□□□□ 0.81
SHKBP1-222ENST00000600320 AP2A1O95782 977 aa20.13■□□□□ 0.81
SHKBP1-222ENST00000600320 ALPIP09923 528 aa20.13■□□□□ 0.81
SHKBP1-222ENST00000600320 BCKDHBP21953 392 aa20.13■□□□□ 0.81
SHKBP1-222ENST00000600320 ZNF528Q3MIS6 628 aa20.13■□□□□ 0.81
SHKBP1-222ENST00000600320 SYDE1Q6ZW31 735 aaPredicted RBP20.13■□□□□ 0.81
SHKBP1-222ENST00000600320 SLC25A41Q8N5S1 370 aa20.13■□□□□ 0.81
SHKBP1-222ENST00000600320 CEP112Q8N8E3 955 aa20.13■□□□□ 0.81
SHKBP1-222ENST00000600320 IFT43Q96FT9 208 aa20.13■□□□□ 0.81
SHKBP1-222ENST00000600320 TOE1Q96GM8 510 aaKnown RBP20.13■□□□□ 0.81
SHKBP1-222ENST00000600320 PPP1R2P1Q96PQ5 205 aa20.13■□□□□ 0.81
SHKBP1-222ENST00000600320 WSB2Q9NYS7 404 aaPredicted RBP20.13■□□□□ 0.81
SHKBP1-222ENST00000600320 ASIC3Q9UHC3 531 aa20.13■□□□□ 0.81
SHKBP1-222ENST00000600320 ARIH1Q9Y4X5 557 aaPredicted RBP20.13■□□□□ 0.81
SHKBP1-222ENST00000600320 TCRBV7S3A2A0A539 114 aa20.12■□□□□ 0.81
SHKBP1-222ENST00000600320 FAM187AA6NFU0 413 aa20.12■□□□□ 0.81
SHKBP1-222ENST00000600320 RIOK3O14730 519 aaKnown RBP20.12■□□□□ 0.81
SHKBP1-222ENST00000600320 PLRG1O43660 514 aaKnown RBP20.12■□□□□ 0.81
SHKBP1-222ENST00000600320 EPOP01588 193 aa20.12■□□□□ 0.81
SHKBP1-222ENST00000600320 XPAP23025 273 aaPredicted RBP20.12■□□□□ 0.81
SHKBP1-222ENST00000600320 IVDP26440 423 aa20.12■□□□□ 0.81
SHKBP1-222ENST00000600320 CD6P30203 668 aa20.12■□□□□ 0.81
SHKBP1-222ENST00000600320 PLA2G5P39877 138 aa20.12■□□□□ 0.81
SHKBP1-222ENST00000600320 EPHB1P54762 984 aa20.12■□□□□ 0.81
SHKBP1-222ENST00000600320 RPL26P61254 145 aaKnown RBP20.12■□□□□ 0.81
SHKBP1-222ENST00000600320 SFSWAPQ12872 951 aaKnown RBP20.12■□□□□ 0.81
SHKBP1-222ENST00000600320 RALGDSQ12967 914 aa20.12■□□□□ 0.81
SHKBP1-222ENST00000600320 USP39Q53GS9 565 aaKnown RBP20.12■□□□□ 0.81
SHKBP1-222ENST00000600320 SIRPB2Q5JXA9 342 aa20.12■□□□□ 0.81
SHKBP1-222ENST00000600320 ANKRD22Q5VYY1 191 aa20.12■□□□□ 0.81
SHKBP1-222ENST00000600320 RANBP10Q6VN20 620 aa20.12■□□□□ 0.81
SHKBP1-222ENST00000600320 MMGT1Q8N4V1 131 aa20.12■□□□□ 0.81
SHKBP1-222ENST00000600320 OR14C36Q8NHC7 312 aa20.12■□□□□ 0.81
SHKBP1-222ENST00000600320 CPT1BQ92523 772 aa20.12■□□□□ 0.81
SHKBP1-222ENST00000600320 TBL1YQ9BQ87 522 aa20.12■□□□□ 0.81
SHKBP1-222ENST00000600320 FSD1LQ9BXM9 530 aa20.12■□□□□ 0.81
SHKBP1-222ENST00000600320 BTBD1Q9H0C5 482 aa20.12■□□□□ 0.81
SHKBP1-222ENST00000600320 B4GALT6Q9UBX8 382 aa20.12■□□□□ 0.81
SHKBP1-222ENST00000600320 RPL26L1Q9UNX3 145 aaKnown RBP20.12■□□□□ 0.81
SHKBP1-222ENST00000600320 PPIL1Q9Y3C6 166 aa20.12■□□□□ 0.81
SHKBP1-222ENST00000600320 A0A0J9YYE9 177 aa20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 A0A0U1RQS6 177 aa20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 GOLGA6CA6NDK9 693 aa20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 GOLGA6BA6NDN3 693 aa20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 A8MX80 341 aa20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 ANKRD66B4E2M5 251 aa20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 E7EVH7 732 aa20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 PSMD3O43242 534 aa20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 HRO43593 1189 aa20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 TRBC1P01850 177 aa20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 APRTP07741 180 aa20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 GOLGA6DP0CG33 693 aa20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 OXTRP30559 389 aa20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 GRIA1P42261 906 aa20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 GRIA4P48058 902 aa20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 POLR2LP62875 67 aaKnown RBP20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 KCNJ11Q14654 390 aa20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 SLC1A5Q15758 541 aa20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 DENND5AQ6IQ26 1287 aa20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 PRSS33Q8NF86 280 aa20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 RAB7BQ96AH8 199 aa20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 RMDN1Q96DB5 314 aa20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 MCCC1Q96RQ3 725 aaPredicted RBP20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 LRRC1Q9BTT6 524 aa20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 ADGRE3Q9BY15 652 aa20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 FAM126AQ9BYI3 521 aaPredicted RBP20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 LRRC40Q9H9A6 602 aa20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 SGK2Q9HBY8 427 aa20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 ZSCAN32Q9NX65 697 aa20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 GOLGA6AQ9NYA3 693 aa20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 PLXND1Q9Y4D7 1925 aa20.11■□□□□ 0.81
SHKBP1-222ENST00000600320 PRR23AA6NEV1 266 aa20.1■□□□□ 0.81
SHKBP1-222ENST00000600320 NPIPB15A6NHN6 443 aaPredicted RBP20.1■□□□□ 0.81
SHKBP1-222ENST00000600320 FAM47DPA6NHR8 397 aa20.1■□□□□ 0.81
SHKBP1-222ENST00000600320 C10orf142B7Z368 130 aa20.1■□□□□ 0.81
SHKBP1-222ENST00000600320 DNALI1O14645 258 aaPredicted RBP20.1■□□□□ 0.81
SHKBP1-222ENST00000600320 AP1G1O43747 822 aa20.1■□□□□ 0.81
SHKBP1-222ENST00000600320 TMEM63AO94886 807 aa20.1■□□□□ 0.81
SHKBP1-222ENST00000600320 SUN1O94901 812 aa20.1■□□□□ 0.81
SHKBP1-222ENST00000600320 SEMA4FO95754 770 aa20.1■□□□□ 0.81
SHKBP1-222ENST00000600320 PIRTP0C851 137 aa20.1■□□□□ 0.81
SHKBP1-222ENST00000600320 HLA-DPA1P20036 260 aa20.1■□□□□ 0.81
SHKBP1-222ENST00000600320 LHCGRP22888 699 aa20.1■□□□□ 0.81
SHKBP1-222ENST00000600320 HNF1BP35680 557 aa20.1■□□□□ 0.81
SHKBP1-222ENST00000600320 MMP12P39900 470 aa20.1■□□□□ 0.81
SHKBP1-222ENST00000600320 ADCY8P40145 1251 aa20.1■□□□□ 0.81
SHKBP1-222ENST00000600320 MAGEA6P43360 314 aa20.1■□□□□ 0.81
SHKBP1-222ENST00000600320 LMAN1P49257 510 aa20.1■□□□□ 0.81
SHKBP1-222ENST00000600320 SUOXP51687 545 aa20.1■□□□□ 0.81
SHKBP1-222ENST00000600320 FAM193AP78312 1265 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms