RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 ARFGAP1Q8N6T3 406 aa14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 FAM131CQ96AQ9 280 aa14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 CFAP57Q96MR6 1250 aa14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 PHF12Q96QT6 1004 aa14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 IL12RB2Q99665 862 aa14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 IRX2Q9BZI1 471 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 FOXJ2Q9P0K8 574 aa14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 ACSL6Q9UKU0 697 aa14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 PCDHB11Q9Y5F2 797 aa14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 CAPN6Q9Y6Q1 641 aa14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 LRBAP50851 2863 aa14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 CENPEQ02224 2701 aa14.11□□□□□ -0.15
SHKBP1-218ENST00000598907 GRID2IPA4D2P6 1211 aa14.11□□□□□ -0.15
SHKBP1-218ENST00000598907 A6NNZ2 444 aa14.11□□□□□ -0.15
SHKBP1-218ENST00000598907 MTSS1O43312 755 aa14.11□□□□□ -0.15
SHKBP1-218ENST00000598907 AQP9O43315 295 aa14.11□□□□□ -0.15
SHKBP1-218ENST00000598907 TFE3P19532 575 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-218ENST00000598907 POU3F2P20265 443 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-218ENST00000598907 HNRNPA2B1P22626 353 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-218ENST00000598907 SDC4P31431 198 aa14.11□□□□□ -0.15
SHKBP1-218ENST00000598907 MAN1A1P33908 653 aa14.11□□□□□ -0.15
SHKBP1-218ENST00000598907 TAS2R38P59533 333 aa14.11□□□□□ -0.15
SHKBP1-218ENST00000598907 PITX1P78337 314 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-218ENST00000598907 C15orf59Q2T9L4 293 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-218ENST00000598907 STRADAQ7RTN6 431 aa14.11□□□□□ -0.15
SHKBP1-218ENST00000598907 SLC35F3Q8IY50 421 aa14.11□□□□□ -0.15
SHKBP1-218ENST00000598907 DQX1Q8TE96 717 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-218ENST00000598907 OR8D1Q8WZ84 308 aa14.11□□□□□ -0.15
SHKBP1-218ENST00000598907 TBCBQ99426 244 aa14.11□□□□□ -0.15
SHKBP1-218ENST00000598907 STRADBQ9C0K7 418 aa14.11□□□□□ -0.15
SHKBP1-218ENST00000598907 PREBQ9HCU5 417 aa14.11□□□□□ -0.15
SHKBP1-218ENST00000598907 STAP1Q9ULZ2 295 aa14.11□□□□□ -0.15
SHKBP1-218ENST00000598907 LOXL2Q9Y4K0 774 aa14.11□□□□□ -0.15
SHKBP1-218ENST00000598907 ALG6Q9Y672 507 aa14.11□□□□□ -0.15
SHKBP1-218ENST00000598907 CACNA1DQ01668 2161 aa14.1□□□□□ -0.15
SHKBP1-218ENST00000598907 PALMO75781 387 aa14.1□□□□□ -0.15
SHKBP1-218ENST00000598907 NME1P15531 152 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-218ENST00000598907 PSMA2P25787 234 aa14.1□□□□□ -0.15
SHKBP1-218ENST00000598907 SLC1A1P43005 524 aa14.1□□□□□ -0.15
SHKBP1-218ENST00000598907 UQCRFS1P47985 274 aa14.1□□□□□ -0.15
SHKBP1-218ENST00000598907 SLC11A2P49281 568 aa14.1□□□□□ -0.15
SHKBP1-218ENST00000598907 EIF3IQ13347 325 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-218ENST00000598907 FZD2Q14332 565 aa14.1□□□□□ -0.15
SHKBP1-218ENST00000598907 MESDQ14696 234 aa14.1□□□□□ -0.15
SHKBP1-218ENST00000598907 ZNF284Q2VY69 593 aa14.1□□□□□ -0.15
SHKBP1-218ENST00000598907 RAB6CQ53S08 254 aa14.1□□□□□ -0.15
SHKBP1-218ENST00000598907 FAM46CQ5VWP2 391 aa14.1□□□□□ -0.15
SHKBP1-218ENST00000598907 NADSYN1Q6IA69 706 aa14.1□□□□□ -0.15
SHKBP1-218ENST00000598907 PARGQ86W56 976 aa14.1□□□□□ -0.15
SHKBP1-218ENST00000598907 RBFAQ8N0V3 343 aa14.1□□□□□ -0.15
SHKBP1-218ENST00000598907 WDR48Q8TAF3 677 aa14.1□□□□□ -0.15
SHKBP1-218ENST00000598907 C9orf43Q8TAL5 461 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-218ENST00000598907 NAT6Q93015 286 aa14.1□□□□□ -0.15
SHKBP1-218ENST00000598907 MIB2Q96AX9 1013 aa14.1□□□□□ -0.15
SHKBP1-218ENST00000598907 IFT43Q96FT9 208 aa14.1□□□□□ -0.15
SHKBP1-218ENST00000598907 RAB6CQ9H0N0 254 aa14.1□□□□□ -0.15
SHKBP1-218ENST00000598907 TMEM51Q9NW97 253 aa14.1□□□□□ -0.15
SHKBP1-218ENST00000598907 SPENQ96T58 3664 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-218ENST00000598907 SCN8AQ9UQD0 1980 aa14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 D6RAR5 112 aa14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 C1QTNF3-AMACRE9PGA6 284 aa14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 IRAK2O43187 625 aa14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 ACSL4O60488 711 aa14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 LRCH4O75427 683 aa14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 TRUB2O95900 331 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 F9P00740 461 aa14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 CSF2P04141 144 aa14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 PCK1P35558 622 aa14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 NNMTP40261 264 aa14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 RPIAP49247 311 aa14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 SULT1E1P49888 294 aa14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 MAPK10P53779 464 aa14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 NAP1L1P55209 391 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 HDAC4P56524 1084 aa14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 NNTQ13423 1086 aa14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 C1orf61Q13536 156 aa14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 ACCSLQ4AC99 568 aa14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 SEL1L3Q68CR1 1132 aa14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 NYAP1Q6ZVC0 841 aa14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 ABI3BPQ7Z7G0 1075 aa14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 TAC4Q86UU9 113 aa14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 NT5DC3Q86UY8 548 aa14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 HORMAD1Q86X24 394 aa14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 CPNE8Q86YQ8 564 aa14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 TRIM58Q8NG06 486 aa14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 FAM172AQ8WUF8 416 aa14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 UBE2Q2Q8WVN8 375 aa14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 GLMNQ92990 594 aa14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 GFM1Q96RP9 751 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 NCAPGQ9BPX3 1015 aa14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 IPO11Q9UI26 975 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 KLF15Q9UIH9 416 aa14.09□□□□□ -0.15
SHKBP1-218ENST00000598907 M0QYT0 321 aa14.08□□□□□ -0.16
SHKBP1-218ENST00000598907 NVLO15381 856 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-218ENST00000598907 RNF8O76064 485 aa14.08□□□□□ -0.16
SHKBP1-218ENST00000598907 PCDH8O95206 1070 aa14.08□□□□□ -0.16
SHKBP1-218ENST00000598907 LUC7L3O95232 432 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-218ENST00000598907 IGLV3-27P01718 113 aa14.08□□□□□ -0.16
SHKBP1-218ENST00000598907 RNF224P0DH78 156 aa14.08□□□□□ -0.16
SHKBP1-218ENST00000598907 JUNDP17535 347 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms