RNA–Protein interactions for RNA: ENST00000591579.5

NEDD4L-232, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 144 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-232ENST00000591579 RP1P56715 2156 aa13.16□□□□□ -0.3
NEDD4L-232ENST00000591579 ZSCAN5CA6NGD5 496 aaPredicted RBP13.16□□□□□ -0.3
NEDD4L-232ENST00000591579 PES1O00541 588 aaKnown RBP13.16□□□□□ -0.3
NEDD4L-232ENST00000591579 PPFIA2O75334 1257 aa13.16□□□□□ -0.3
NEDD4L-232ENST00000591579 TNFP01375 233 aa13.16□□□□□ -0.3
NEDD4L-232ENST00000591579 PRKCGP05129 697 aa13.16□□□□□ -0.3
NEDD4L-232ENST00000591579 MMEP08473 750 aa13.16□□□□□ -0.3
NEDD4L-232ENST00000591579 SFTPCP11686 197 aa13.16□□□□□ -0.3
NEDD4L-232ENST00000591579 PRKCSHP14314 528 aaPredicted RBP13.16□□□□□ -0.3
NEDD4L-232ENST00000591579 WT1P19544 449 aaPredicted RBP13.16□□□□□ -0.3
NEDD4L-232ENST00000591579 NRG1Q02297 640 aaPredicted RBP13.16□□□□□ -0.3
NEDD4L-232ENST00000591579 TMEM52BQ4KMG9 183 aa13.16□□□□□ -0.3
NEDD4L-232ENST00000591579 CERCAMQ5T4B2 595 aa13.16□□□□□ -0.3
NEDD4L-232ENST00000591579 SMYD5Q6GMV2 418 aa13.16□□□□□ -0.3
NEDD4L-232ENST00000591579 SPRED1Q7Z699 444 aa13.16□□□□□ -0.3
NEDD4L-232ENST00000591579 TAF8Q7Z7C8 310 aa13.16□□□□□ -0.3
NEDD4L-232ENST00000591579 SFTPA2Q8IWL1 248 aa13.16□□□□□ -0.3
NEDD4L-232ENST00000591579 FAM46DQ8NEK8 389 aa13.16□□□□□ -0.3
NEDD4L-232ENST00000591579 GPT2Q8TD30 523 aa13.16□□□□□ -0.3
NEDD4L-232ENST00000591579 JPH3Q8WXH2 748 aaPredicted RBP13.16□□□□□ -0.3
NEDD4L-232ENST00000591579 OR1E3Q8WZA6 343 aa13.16□□□□□ -0.3
NEDD4L-232ENST00000591579 HMCESQ96FZ2 354 aa13.16□□□□□ -0.3
NEDD4L-232ENST00000591579 RBM15Q96T37 977 aaKnown RBP eCLIP13.16□□□□□ -0.3
NEDD4L-232ENST00000591579 CMKLR1Q99788 373 aa13.16□□□□□ -0.3
NEDD4L-232ENST00000591579 KLC2Q9H0B6 622 aa13.16□□□□□ -0.3
NEDD4L-232ENST00000591579 NDST4Q9H3R1 872 aa13.16□□□□□ -0.3
NEDD4L-232ENST00000591579 DKK3Q9UBP4 350 aa13.16□□□□□ -0.3
NEDD4L-232ENST00000591579 RNF215Q9Y6U7 377 aa13.16□□□□□ -0.3
NEDD4L-232ENST00000591579 KIF26BQ2KJY2 2108 aa13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 C9orf172C9J069 976 aa13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 SUV39H1O43463 412 aa13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 GADD45BO75293 160 aaPredicted RBP13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 GLB1P16278 677 aa13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 ITGB6P18564 788 aa13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 EPHB2P29323 1055 aa13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 LIG3P49916 1009 aa13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 MTM1Q13496 603 aa13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 ARHGEF7Q14155 803 aa13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 CAMK4Q16566 473 aa13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 VWA3BQ502W6 1294 aa13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 HSP90AA4PQ58FG1 418 aa13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 COLEC12Q5KU26 742 aa13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 ARCQ7LC44 396 aa13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 RTL3Q8N8U3 475 aaKnown RBP13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 GPR156Q8NFN8 814 aa13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 JOSD2Q8TAC2 188 aa13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 EPS8L1Q8TE68 723 aa13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 FAM172AQ8WUF8 416 aa13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 SLC20A1Q8WUM9 679 aa13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 CASKIN2Q8WXE0 1202 aa13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 TMEM159Q96B96 161 aa13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 C11orf70Q9BRQ4 267 aa13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 DPEP2Q9H4A9 486 aa13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 RETREG1Q9H6L5 497 aa13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 NOL6Q9H6R4 1146 aaKnown RBP13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 SUDS3Q9H7L9 328 aaPredicted RBP13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 FGF22Q9HCT0 170 aa13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 AKAP7Q9P0M2 348 aaPredicted RBP13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 LRIT1Q9P2V4 623 aa13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 LHX3Q9UBR4 397 aa13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 MOSPD1Q9UJG1 213 aa13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 MFHAS1Q9Y4C4 1052 aa13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 DAAM1Q9Y4D1 1078 aa13.15□□□□□ -0.3
NEDD4L-232ENST00000591579 F8VZ95 297 aa13.14□□□□□ -0.31
NEDD4L-232ENST00000591579 CACNB4O00305 520 aaPredicted RBP13.14□□□□□ -0.31
NEDD4L-232ENST00000591579 MMP12P39900 470 aa13.14□□□□□ -0.31
NEDD4L-232ENST00000591579 SUOXP51687 545 aa13.14□□□□□ -0.31
NEDD4L-232ENST00000591579 HDAC4P56524 1084 aa13.14□□□□□ -0.31
NEDD4L-232ENST00000591579 ZFP36L1Q07352 338 aaKnown RBP13.14□□□□□ -0.31
NEDD4L-232ENST00000591579 CLCA4Q14CN2 919 aa13.14□□□□□ -0.31
NEDD4L-232ENST00000591579 UGP2Q16851 508 aa13.14□□□□□ -0.31
NEDD4L-232ENST00000591579 AMZ1Q400G9 498 aa13.14□□□□□ -0.31
NEDD4L-232ENST00000591579 C14orf28Q4W4Y0 310 aa13.14□□□□□ -0.31
NEDD4L-232ENST00000591579 KLHDC7AQ5VTJ3 777 aa13.14□□□□□ -0.31
NEDD4L-232ENST00000591579 SPECC1LQ69YQ0 1117 aa13.14□□□□□ -0.31
NEDD4L-232ENST00000591579 DPY19L2P1Q6NXN4 242 aa13.14□□□□□ -0.31
NEDD4L-232ENST00000591579 ZNF574Q6ZN55 896 aaPredicted RBP13.14□□□□□ -0.31
NEDD4L-232ENST00000591579 STRADAQ7RTN6 431 aa13.14□□□□□ -0.31
NEDD4L-232ENST00000591579 TMPRSS9Q7Z410 1059 aa13.14□□□□□ -0.31
NEDD4L-232ENST00000591579 FAM114A1Q8IWE2 563 aa13.14□□□□□ -0.31
NEDD4L-232ENST00000591579 PYROXD2Q8N2H3 581 aa13.14□□□□□ -0.31
NEDD4L-232ENST00000591579 PAF1Q8N7H5 531 aa13.14□□□□□ -0.31
NEDD4L-232ENST00000591579 PLA2G15Q8NCC3 412 aa13.14□□□□□ -0.31
NEDD4L-232ENST00000591579 OR56A4Q8NGH8 313 aa13.14□□□□□ -0.31
NEDD4L-232ENST00000591579 HTR3CQ8WXA8 447 aa13.14□□□□□ -0.31
NEDD4L-232ENST00000591579 SEMA6CQ9H3T2 930 aa13.14□□□□□ -0.31
NEDD4L-232ENST00000591579 RDH14Q9HBH5 336 aa13.14□□□□□ -0.31
NEDD4L-232ENST00000591579 MRPL40Q9NQ50 206 aaKnown RBP13.14□□□□□ -0.31
NEDD4L-232ENST00000591579 APPL1Q9UKG1 709 aa13.14□□□□□ -0.31
NEDD4L-232ENST00000591579 ATP8A1Q9Y2Q0 1164 aa13.14□□□□□ -0.31
NEDD4L-232ENST00000591579 DGKBQ9Y6T7 804 aa13.14□□□□□ -0.31
NEDD4L-232ENST00000591579 A0A1W2PQC6 194 aa13.13□□□□□ -0.31
NEDD4L-232ENST00000591579 TSPAN11A1L157 253 aa13.13□□□□□ -0.31
NEDD4L-232ENST00000591579 TMEM202A6NGA9 273 aa13.13□□□□□ -0.31
NEDD4L-232ENST00000591579 C2CD4BA6NLJ0 364 aa13.13□□□□□ -0.31
NEDD4L-232ENST00000591579 RASA4BC9J798 803 aa13.13□□□□□ -0.31
NEDD4L-232ENST00000591579 RASA4O43374 803 aa13.13□□□□□ -0.31
NEDD4L-232ENST00000591579 CREB3O43889 395 aa13.13□□□□□ -0.31
NEDD4L-232ENST00000591579 UCHL3P15374 230 aa13.13□□□□□ -0.31
NEDD4L-232ENST00000591579 MMP8P22894 467 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms