RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 GSTA3Q16772 222 aa14.78□□□□□ -0.04
CCDC43-203ENST00000588210 SPANXN3Q5MJ09 141 aa14.78□□□□□ -0.04
CCDC43-203ENST00000588210 TMCO4Q5TGY1 634 aa14.78□□□□□ -0.04
CCDC43-203ENST00000588210 OTUD1Q5VV17 481 aaPredicted RBP14.78□□□□□ -0.04
CCDC43-203ENST00000588210 RASSF3Q86WH2 238 aa14.78□□□□□ -0.04
CCDC43-203ENST00000588210 KIAA1958Q8N8K9 716 aa14.78□□□□□ -0.04
CCDC43-203ENST00000588210 ISL2Q96A47 359 aa14.78□□□□□ -0.04
CCDC43-203ENST00000588210 LRRC3BQ96PB8 259 aa14.78□□□□□ -0.04
CCDC43-203ENST00000588210 SLC2A4RGQ9NR83 387 aa14.78□□□□□ -0.04
CCDC43-203ENST00000588210 OLA1Q9NTK5 396 aaKnown RBP14.78□□□□□ -0.04
CCDC43-203ENST00000588210 SYBUQ9NX95 663 aa14.78□□□□□ -0.04
CCDC43-203ENST00000588210 DNMT3LQ9UJW3 386 aa14.78□□□□□ -0.04
CCDC43-203ENST00000588210 CPQQ9Y646 472 aa14.78□□□□□ -0.04
CCDC43-203ENST00000588210 NARSO43776 548 aaKnown RBP14.77□□□□□ -0.04
CCDC43-203ENST00000588210 ZNF189O75820 626 aaPredicted RBP14.77□□□□□ -0.04
CCDC43-203ENST00000588210 TBX18O95935 607 aa14.77□□□□□ -0.04
CCDC43-203ENST00000588210 LTFP02788 710 aa14.77□□□□□ -0.04
CCDC43-203ENST00000588210 KCNA4P22459 653 aa14.77□□□□□ -0.04
CCDC43-203ENST00000588210 PSMB4P28070 264 aa14.77□□□□□ -0.04
CCDC43-203ENST00000588210 GP5P40197 560 aa14.77□□□□□ -0.04
CCDC43-203ENST00000588210 GARSP41250 739 aaKnown RBP14.77□□□□□ -0.04
CCDC43-203ENST00000588210 MAGEA12P43365 314 aa14.77□□□□□ -0.04
CCDC43-203ENST00000588210 USP4Q13107 963 aa14.77□□□□□ -0.04
CCDC43-203ENST00000588210 GRM2Q14416 872 aa14.77□□□□□ -0.04
CCDC43-203ENST00000588210 ZNF77Q15935 545 aa14.77□□□□□ -0.04
CCDC43-203ENST00000588210 C10orf120Q5SQS8 335 aa14.77□□□□□ -0.04
CCDC43-203ENST00000588210 C1orf146Q5VVC0 180 aa14.77□□□□□ -0.04
CCDC43-203ENST00000588210 RFX8Q6ZV50 586 aa14.77□□□□□ -0.04
CCDC43-203ENST00000588210 MAVSQ7Z434 540 aa14.77□□□□□ -0.04
CCDC43-203ENST00000588210 BNIPLQ7Z465 357 aa14.77□□□□□ -0.04
CCDC43-203ENST00000588210 ADGRG6Q86SQ4 1221 aa14.77□□□□□ -0.04
CCDC43-203ENST00000588210 FAM131BQ86XD5 332 aa14.77□□□□□ -0.04
CCDC43-203ENST00000588210 DEFB106AQ8N104 65 aa14.77□□□□□ -0.04
CCDC43-203ENST00000588210 SH3RF2Q8TEC5 729 aa14.77□□□□□ -0.04
CCDC43-203ENST00000588210 PPP4R1Q8TF05 950 aa14.77□□□□□ -0.04
CCDC43-203ENST00000588210 RNF139Q8WU17 664 aa14.77□□□□□ -0.04
CCDC43-203ENST00000588210 EDAQ92838 391 aa14.77□□□□□ -0.04
CCDC43-203ENST00000588210 IRF7Q92985 503 aa14.77□□□□□ -0.04
CCDC43-203ENST00000588210 SORT1Q99523 831 aa14.77□□□□□ -0.04
CCDC43-203ENST00000588210 TRIM62Q9BVG3 475 aa14.77□□□□□ -0.04
CCDC43-203ENST00000588210 SLC24A3Q9HC58 644 aa14.77□□□□□ -0.04
CCDC43-203ENST00000588210 NDE1Q9NXR1 346 aa14.77□□□□□ -0.04
CCDC43-203ENST00000588210 SCOCQ9UIL1 159 aa14.77□□□□□ -0.04
CCDC43-203ENST00000588210 APOBEC2Q9Y235 224 aaKnown RBP14.77□□□□□ -0.04
CCDC43-203ENST00000588210 PSAT1Q9Y617 370 aa14.77□□□□□ -0.04
CCDC43-203ENST00000588210 A0A088AWK7 358 aa14.77□□□□□ -0.05
CCDC43-203ENST00000588210 CCDC189A1A4V9 331 aa14.77□□□□□ -0.05
CCDC43-203ENST00000588210 MEI4A8MW99 385 aa14.77□□□□□ -0.05
CCDC43-203ENST00000588210 F5H423 210 aaPredicted RBP14.77□□□□□ -0.05
CCDC43-203ENST00000588210 LEFTY2O00292 366 aa14.77□□□□□ -0.05
CCDC43-203ENST00000588210 PPP1R12AO14974 1030 aaPredicted RBP14.77□□□□□ -0.05
CCDC43-203ENST00000588210 HARS2P49590 506 aaKnown RBP14.77□□□□□ -0.05
CCDC43-203ENST00000588210 ZXDBP98169 803 aa14.77□□□□□ -0.05
CCDC43-203ENST00000588210 PFKPQ01813 784 aa14.77□□□□□ -0.05
CCDC43-203ENST00000588210 PAFAH1B3Q15102 231 aaKnown RBP14.77□□□□□ -0.05
CCDC43-203ENST00000588210 AAGABQ6PD74 315 aa14.77□□□□□ -0.05
CCDC43-203ENST00000588210 BEND5Q7L4P6 421 aa14.77□□□□□ -0.05
CCDC43-203ENST00000588210 CERS2Q96G23 380 aa14.77□□□□□ -0.05
CCDC43-203ENST00000588210 ZFRQ96KR1 1074 aaKnown RBP14.77□□□□□ -0.05
CCDC43-203ENST00000588210 CPNE1Q99829 537 aa14.77□□□□□ -0.05
CCDC43-203ENST00000588210 YIPF3Q9GZM5 350 aa14.77□□□□□ -0.05
CCDC43-203ENST00000588210 BRD9Q9H8M2 597 aa14.77□□□□□ -0.05
CCDC43-203ENST00000588210 TRPV5Q9NQA5 729 aa14.77□□□□□ -0.05
CCDC43-203ENST00000588210 COPG2Q9UBF2 871 aa14.77□□□□□ -0.05
CCDC43-203ENST00000588210 NUDT5Q9UKK9 219 aa14.77□□□□□ -0.05
CCDC43-203ENST00000588210 SHROOM3Q8TF72 1996 aa14.76□□□□□ -0.05
CCDC43-203ENST00000588210 HELZP42694 1942 aaKnown RBP14.76□□□□□ -0.05
CCDC43-203ENST00000588210 SIN3BO75182 1162 aa14.76□□□□□ -0.05
CCDC43-203ENST00000588210 POLBP06746 335 aa14.76□□□□□ -0.05
CCDC43-203ENST00000588210 MX2P20592 715 aa14.76□□□□□ -0.05
CCDC43-203ENST00000588210 GDI1P31150 447 aa14.76□□□□□ -0.05
CCDC43-203ENST00000588210 PDE1BQ01064 536 aa14.76□□□□□ -0.05
CCDC43-203ENST00000588210 GRTP1Q5TC63 336 aa14.76□□□□□ -0.05
CCDC43-203ENST00000588210 OR52E8Q6IFG1 317 aa14.76□□□□□ -0.05
CCDC43-203ENST00000588210 HFE2Q6ZVN8 426 aa14.76□□□□□ -0.05
CCDC43-203ENST00000588210 C10orf107Q8IVU9 208 aa14.76□□□□□ -0.05
CCDC43-203ENST00000588210 ZNF567Q8N184 647 aa14.76□□□□□ -0.05
CCDC43-203ENST00000588210 OR6Y1Q8NGX8 325 aa14.76□□□□□ -0.05
CCDC43-203ENST00000588210 GATA6Q92908 595 aa14.76□□□□□ -0.05
CCDC43-203ENST00000588210 NT5C3BQ969T7 300 aa14.76□□□□□ -0.05
CCDC43-203ENST00000588210 FAM149B1Q96BN6 582 aa14.76□□□□□ -0.05
CCDC43-203ENST00000588210 IFT43Q96FT9 208 aa14.76□□□□□ -0.05
CCDC43-203ENST00000588210 KLF16Q9BXK1 252 aaPredicted RBP14.76□□□□□ -0.05
CCDC43-203ENST00000588210 SMOC2Q9H3U7 446 aa14.76□□□□□ -0.05
CCDC43-203ENST00000588210 SMPD4Q9NXE4 827 aa14.76□□□□□ -0.05
CCDC43-203ENST00000588210 DLGAP2Q9P1A6 1054 aa14.76□□□□□ -0.05
CCDC43-203ENST00000588210 TTC28Q96AY4 2481 aa14.76□□□□□ -0.05
CCDC43-203ENST00000588210 MAGEA13PA6NCF6 341 aa14.75□□□□□ -0.05
CCDC43-203ENST00000588210 ZNF195O14628 629 aa14.75□□□□□ -0.05
CCDC43-203ENST00000588210 CCNT2O60583 730 aaKnown RBP14.75□□□□□ -0.05
CCDC43-203ENST00000588210 IDH3AP50213 366 aa14.75□□□□□ -0.05
CCDC43-203ENST00000588210 COPAP53621 1224 aa14.75□□□□□ -0.05
CCDC43-203ENST00000588210 ABCE1P61221 599 aaKnown RBP14.75□□□□□ -0.05
CCDC43-203ENST00000588210 COG7P83436 770 aa14.75□□□□□ -0.05
CCDC43-203ENST00000588210 DPYSQ14117 519 aa14.75□□□□□ -0.05
CCDC43-203ENST00000588210 FRG1Q14331 258 aaKnown RBP14.75□□□□□ -0.05
CCDC43-203ENST00000588210 CCDC153Q494R4 210 aa14.75□□□□□ -0.05
CCDC43-203ENST00000588210 RIN3Q8TB24 985 aa14.75□□□□□ -0.05
CCDC43-203ENST00000588210 EDEM1Q92611 657 aa14.75□□□□□ -0.05
CCDC43-203ENST00000588210 DNASE1L2Q92874 299 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms