RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 TIMP4Q99727 224 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 PAAF1Q9BRP4 392 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 PHF7Q9BWX1 381 aaPredicted RBP4.93□□□□□ -1.62
ZNF540-204ENST00000586792 NAA15Q9BXJ9 866 aaKnown RBP4.93□□□□□ -1.62
ZNF540-204ENST00000586792 TRIM9Q9C026 710 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 REXO4Q9GZR2 422 aaKnown RBP4.93□□□□□ -1.62
ZNF540-204ENST00000586792 ST6GALNAC4Q9H4F1 302 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 PLEKHA4Q9H4M7 779 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 GALNT9Q9HCQ5 603 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 ANLNQ9NQW6 1124 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 MRGBPQ9NV56 204 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 EXOC1Q9NV70 894 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 RBAKQ9NYW8 714 aaPredicted RBP4.93□□□□□ -1.62
ZNF540-204ENST00000586792 FNIP2Q9P278 1114 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 CACNG4Q9UBN1 327 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 HOOK1Q9UJC3 728 aaKnown RBP4.93□□□□□ -1.62
ZNF540-204ENST00000586792 PCDHA7Q9UN72 937 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 UBE4BO95155 1302 aa4.93□□□□□ -1.62
ZNF540-204ENST00000586792 LAMA2P24043 3122 aaKnown RBP4.92□□□□□ -1.62
ZNF540-204ENST00000586792 CITO14578 2027 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 PDCD11Q14690 1871 aaKnown RBP4.92□□□□□ -1.62
ZNF540-204ENST00000586792 A0A0B4J269 797 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 CCDC195A0A1B0GUA6 201 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 A0A1B0GVL5 298 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 A0A1W2PR48 441 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 WIPF3A6NGB9 483 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 F8W810 466 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 I3L4J1 428 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 NEMP1O14524 444 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 PRRG1O14668 218 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 EIF3DO15371 548 aaKnown RBP eCLIP4.92□□□□□ -1.62
ZNF540-204ENST00000586792 DCXO43602 365 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 MT-CO1P00395 513 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 TNNC2P02585 160 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 PYGLP06737 847 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 KRT19P08727 400 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 TMEM191BP0C7N4 346 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 MYBP10242 640 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 GLULP15104 373 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 PFKFB1P16118 471 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 RPL17P18621 184 aaKnown RBP4.92□□□□□ -1.62
ZNF540-204ENST00000586792 SLC9A1P19634 815 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 GPD1P21695 349 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 SP100P23497 879 aaPredicted RBP4.92□□□□□ -1.62
ZNF540-204ENST00000586792 OR1D2P34982 312 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 ATP6V1E1P36543 226 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 PNPLA4P41247 253 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 TNFSF9P41273 254 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 SYKP43405 635 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 BRCC3P46736 316 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 ACOT2P49753 483 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 SCNN1BP51168 640 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 ZNF132P52740 706 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 ARPP19P56211 112 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 TFAMQ00059 246 aaKnown RBP4.92□□□□□ -1.62
ZNF540-204ENST00000586792 YWHAHQ04917 246 aaPredicted RBP4.92□□□□□ -1.62
ZNF540-204ENST00000586792 SPAG1Q07617 926 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 GALEQ14376 348 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 TAF12Q16514 161 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 CTXN3Q4LDR2 81 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 JADE1Q6IE81 842 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 ESRP1Q6NXG1 681 aaKnown RBP4.92□□□□□ -1.62
ZNF540-204ENST00000586792 PRSS55Q6UWB4 352 aaPredicted RBP4.92□□□□□ -1.62
ZNF540-204ENST00000586792 CYP26C1Q6V0L0 522 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 C15orf39Q6ZRI6 1047 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 UNC13DQ70J99 1090 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 UBE2R2Q712K3 238 aaPredicted RBP4.92□□□□□ -1.62
ZNF540-204ENST00000586792 CHST15Q7LFX5 561 aaPredicted RBP4.92□□□□□ -1.62
ZNF540-204ENST00000586792 METTL23Q86XA0 190 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 GPD1LQ8N335 351 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 FSIP1Q8NA03 581 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 MSANTD4Q8NCY6 345 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 VN1R2Q8NFZ6 395 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 GOLGA5Q8TBA6 731 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 LRRC15Q8TF66 581 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 CENPTQ96BT3 561 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 DNAJC19Q96DA6 116 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 SAAL1Q96ER3 474 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 ANKRD36BP1Q96IX9 119 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 ZNF560Q96MR9 790 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 FNBP1Q96RU3 617 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 NEU1Q99519 415 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 FAM213AQ9BRX8 229 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 VN1R3Q9BXE9 311 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 BLZF1Q9H2G9 400 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 ASB7Q9H672 318 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 ZDHHC7Q9NXF8 308 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 EPS15L1Q9UBC2 864 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 MTRRQ9UBK8 725 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 TUBGCP4Q9UGJ1 667 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 XPO7Q9UIA9 1087 aaKnown RBP4.92□□□□□ -1.62
ZNF540-204ENST00000586792 CPSF3Q9UKF6 684 aaKnown RBP4.92□□□□□ -1.62
ZNF540-204ENST00000586792 RCOR1Q9UKL0 485 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 RABL2BQ9UNT1 228 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 DERAQ9Y315 318 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 C2CD2Q9Y426 696 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 SPO11Q9Y5K1 396 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 CDY1Q9Y6F8 540 aa4.92□□□□□ -1.62
ZNF540-204ENST00000586792 TCF20Q9UGU0 1960 aaKnown RBP4.92□□□□□ -1.62
ZNF540-204ENST00000586792 COL6A3P12111 3177 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms