RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 TP73O15350 636 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 AGTP01019 485 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 IGLV3-19P01714 112 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 CCDC15Q0P6D6 951 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 SPARCL1Q14515 664 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 UGP2Q16851 508 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 POM121L1PQ3SYA9 428 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 SIRPB2Q5JXA9 342 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 TEX35Q5T0J7 233 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 SYCP2LQ5T4T6 812 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 ANKRD22Q5VYY1 191 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 DENND5AQ6IQ26 1287 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 HIBCHQ6NVY1 386 aaPredicted RBP17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 KIAA1324Q6UXG2 1013 aaKnown RBP17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 LPCAT1Q8NF37 534 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 RAB7BQ96AH8 199 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 MCCC1Q96RQ3 725 aaPredicted RBP17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 DPH5Q9H2P9 285 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 C11orf16Q9NQ32 467 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 GRHL1Q9NZI5 618 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 BCCIPQ9P287 314 aaKnown RBP eCLIP17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 PLXND1Q9Y4D7 1925 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 AP3B1O00203 1094 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 SLC7A4O43246 635 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 USP12O75317 370 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 ACADMP11310 421 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 ADRB3P13945 408 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 TIMP2P16035 220 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 NFKBIAP25963 317 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 P2RY2P41231 377 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 ITGA8P53708 1063 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 SARNPP82979 210 aaKnown RBP17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 GUCY2DQ02846 1103 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 CNTN1Q12860 1018 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 CALCOCO2Q13137 446 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 OLIG2Q13516 323 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 GALNT3Q14435 633 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 QPCTQ16769 361 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 PIP5KL1Q5T9C9 394 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 AGBL4Q5VU57 503 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 FBXL19Q6PCT2 694 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 ZNF534Q76KX8 674 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 KDELC2Q7Z4H8 507 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 NDUFAF2Q8N183 169 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 PAF1Q8N7H5 531 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 DTWD2Q8NBA8 298 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 FRMD8Q9BZ67 464 aaPredicted RBP17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 FAM129AQ9BZQ8 928 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 CASS4Q9NQ75 786 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 FBXL12Q9NXK8 326 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 SERGEFQ9UGK8 458 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 CCDC163A0A0D9SF12 145 aa17.06■□□□□ 0.32
PRKCSH-203ENST00000586486 A0A0J9YYE9 177 aa17.06■□□□□ 0.32
PRKCSH-203ENST00000586486 CAPN8A6NHC0 703 aa17.06■□□□□ 0.32
PRKCSH-203ENST00000586486 TRBC1P01850 177 aa17.06■□□□□ 0.32
PRKCSH-203ENST00000586486 MLNP12872 115 aa17.06■□□□□ 0.32
PRKCSH-203ENST00000586486 CHRNA4P43681 627 aa17.06■□□□□ 0.32
PRKCSH-203ENST00000586486 EPHB1P54762 984 aa17.06■□□□□ 0.32
PRKCSH-203ENST00000586486 CDH17Q12864 832 aa17.06■□□□□ 0.32
PRKCSH-203ENST00000586486 USP45Q70EL2 814 aa17.06■□□□□ 0.32
PRKCSH-203ENST00000586486 C1orf210Q8IVY1 113 aa17.06■□□□□ 0.32
PRKCSH-203ENST00000586486 HDDC3Q8N4P3 179 aa17.06■□□□□ 0.32
PRKCSH-203ENST00000586486 RMDN1Q96DB5 314 aa17.06■□□□□ 0.32
PRKCSH-203ENST00000586486 SCRN2Q96FV2 425 aa17.06■□□□□ 0.32
PRKCSH-203ENST00000586486 LYSMD1Q96S90 227 aa17.06■□□□□ 0.32
PRKCSH-203ENST00000586486 OMDQ99983 421 aa17.06■□□□□ 0.32
PRKCSH-203ENST00000586486 APOL2Q9BQE5 337 aa17.06■□□□□ 0.32
PRKCSH-203ENST00000586486 XAB2Q9HCS7 855 aaKnown RBP17.06■□□□□ 0.32
PRKCSH-203ENST00000586486 ITM2CQ9NQX7 267 aa17.06■□□□□ 0.32
PRKCSH-203ENST00000586486 FAM114A2Q9NRY5 505 aa17.06■□□□□ 0.32
PRKCSH-203ENST00000586486 ANAPC5Q9UJX4 755 aa17.06■□□□□ 0.32
PRKCSH-203ENST00000586486 A0A1W2PP55 124 aa17.05■□□□□ 0.32
PRKCSH-203ENST00000586486 AREL1O15033 823 aa17.05■□□□□ 0.32
PRKCSH-203ENST00000586486 LAMTOR5O43504 91 aa17.05■□□□□ 0.32
PRKCSH-203ENST00000586486 AP1G1O43747 822 aa17.05■□□□□ 0.32
PRKCSH-203ENST00000586486 GPR37L1O60883 481 aa17.05■□□□□ 0.32
PRKCSH-203ENST00000586486 RNASEH2AO75792 299 aaKnown RBP17.05■□□□□ 0.32
PRKCSH-203ENST00000586486 RHOXF2BP0C7M4 288 aa17.05■□□□□ 0.32
PRKCSH-203ENST00000586486 TDGF1P13385 188 aa17.05■□□□□ 0.32
PRKCSH-203ENST00000586486 AVPR2P30518 371 aa17.05■□□□□ 0.32
PRKCSH-203ENST00000586486 GRIA1P42261 906 aa17.05■□□□□ 0.32
PRKCSH-203ENST00000586486 ABL2P42684 1182 aa17.05■□□□□ 0.32
PRKCSH-203ENST00000586486 TPMTP51580 245 aa17.05■□□□□ 0.32
PRKCSH-203ENST00000586486 TERF1P54274 439 aa17.05■□□□□ 0.32
PRKCSH-203ENST00000586486 CAV1Q03135 178 aa17.05■□□□□ 0.32
PRKCSH-203ENST00000586486 LRRC8BQ6P9F7 803 aa17.05■□□□□ 0.32
PRKCSH-203ENST00000586486 PPP1R21Q6ZMI0 780 aa17.05■□□□□ 0.32
PRKCSH-203ENST00000586486 TTC7BQ86TV6 843 aa17.05■□□□□ 0.32
PRKCSH-203ENST00000586486 PGBD3Q8N328 593 aa17.05■□□□□ 0.32
PRKCSH-203ENST00000586486 RUBCNQ92622 972 aa17.05■□□□□ 0.32
PRKCSH-203ENST00000586486 ART4Q93070 314 aa17.05■□□□□ 0.32
PRKCSH-203ENST00000586486 SRPK1Q96SB4 655 aaKnown RBP17.05■□□□□ 0.32
PRKCSH-203ENST00000586486 RHOXF2Q9BQY4 288 aa17.05■□□□□ 0.32
PRKCSH-203ENST00000586486 EPB41L5Q9HCM4 733 aa17.05■□□□□ 0.32
PRKCSH-203ENST00000586486 GDF3Q9NR23 364 aa17.05■□□□□ 0.32
PRKCSH-203ENST00000586486 NCKAP1Q9Y2A7 1128 aa17.05■□□□□ 0.32
PRKCSH-203ENST00000586486 ESYT3A0FGR9 886 aa17.04■□□□□ 0.32
PRKCSH-203ENST00000586486 PRR33A8MZF0 331 aa17.04■□□□□ 0.32
PRKCSH-203ENST00000586486 PLK4O00444 970 aa17.04■□□□□ 0.32
PRKCSH-203ENST00000586486 SPINT1O43278 529 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms