RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 CAV1Q03135 178 aa11.74□□□□□ -0.53
CDRT1-207ENST00000583965 BRD3Q15059 726 aa11.74□□□□□ -0.53
CDRT1-207ENST00000583965 SLC1A5Q15758 541 aa11.74□□□□□ -0.53
CDRT1-207ENST00000583965 PPP1R21Q6ZMI0 780 aa11.74□□□□□ -0.53
CDRT1-207ENST00000583965 ERN2Q76MJ5 926 aaKnown RBP11.74□□□□□ -0.53
CDRT1-207ENST00000583965 KBTBD6Q86V97 674 aa11.74□□□□□ -0.53
CDRT1-207ENST00000583965 RASSF3Q86WH2 238 aa11.74□□□□□ -0.53
CDRT1-207ENST00000583965 NAT8LQ8N9F0 302 aa11.74□□□□□ -0.53
CDRT1-207ENST00000583965 PDCD6IPQ8WUM4 868 aaKnown RBP11.74□□□□□ -0.53
CDRT1-207ENST00000583965 HMGB4Q8WW32 186 aa11.74□□□□□ -0.53
CDRT1-207ENST00000583965 PIH1D2Q8WWB5 315 aa11.74□□□□□ -0.53
CDRT1-207ENST00000583965 RAB7BQ96AH8 199 aa11.74□□□□□ -0.53
CDRT1-207ENST00000583965 ARRDC3Q96B67 414 aa11.74□□□□□ -0.53
CDRT1-207ENST00000583965 SRPK1Q96SB4 655 aaKnown RBP11.74□□□□□ -0.53
CDRT1-207ENST00000583965 COL25A1Q9BXS0 654 aaPredicted RBP11.74□□□□□ -0.53
CDRT1-207ENST00000583965 FRMD8Q9BZ67 464 aaPredicted RBP11.74□□□□□ -0.53
CDRT1-207ENST00000583965 TRIM31Q9BZY9 425 aa11.74□□□□□ -0.53
CDRT1-207ENST00000583965 EPHX3Q9H6B9 360 aa11.74□□□□□ -0.53
CDRT1-207ENST00000583965 FAM114A2Q9NRY5 505 aa11.74□□□□□ -0.53
CDRT1-207ENST00000583965 SPATA6Q9NWH7 488 aaPredicted RBP11.74□□□□□ -0.53
CDRT1-207ENST00000583965 BCCIPQ9P287 314 aaKnown RBP eCLIP11.74□□□□□ -0.53
CDRT1-207ENST00000583965 EBF1Q9UH73 591 aa11.74□□□□□ -0.53
CDRT1-207ENST00000583965 FZD4Q9ULV1 537 aa11.74□□□□□ -0.53
CDRT1-207ENST00000583965 PCDHB9Q9Y5E1 797 aa11.74□□□□□ -0.53
CDRT1-207ENST00000583965 BPTFQ12830 3046 aa11.74□□□□□ -0.53
CDRT1-207ENST00000583965 CCDC151A5D8V7 595 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 C16orf96A6NNT2 1141 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 UPK3BL1B0FP48 263 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 ANKRD66B4E2M5 251 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 UPK3BL2E5RIL1 263 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 SLC7A4O43246 635 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 PDHA1P08559 390 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 MLNP12872 115 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 XPAP23025 273 aaPredicted RBP11.73□□□□□ -0.53
CDRT1-207ENST00000583965 DRD3P35462 400 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 ITGA8P53708 1063 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 GUCY2DQ02846 1103 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 ELP6Q0PNE2 266 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 CDH17Q12864 832 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 UGP2Q16851 508 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 ARMC3Q5W041 872 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 HIBCHQ6NVY1 386 aaPredicted RBP11.73□□□□□ -0.53
CDRT1-207ENST00000583965 LRRC8BQ6P9F7 803 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 FBXL19Q6PCT2 694 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 KIAA1324Q6UXG2 1013 aaKnown RBP11.73□□□□□ -0.53
CDRT1-207ENST00000583965 USP45Q70EL2 814 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 PARS2Q7L3T8 475 aaKnown RBP11.73□□□□□ -0.53
CDRT1-207ENST00000583965 CUL9Q8IWT3 2517 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 AADATQ8N5Z0 425 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 LPCAT1Q8NF37 534 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 FAM131CQ96AQ9 280 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 RMDN1Q96DB5 314 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 ERLEC1Q96DZ1 483 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 HHIPQ96QV1 700 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 OMDQ99983 421 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 PARD6BQ9BYG5 372 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 DPH5Q9H2P9 285 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 EPB41L5Q9HCM4 733 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 XAB2Q9HCS7 855 aaKnown RBP11.73□□□□□ -0.53
CDRT1-207ENST00000583965 CASS4Q9NQ75 786 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 PRMT8Q9NR22 394 aaPredicted RBP11.73□□□□□ -0.53
CDRT1-207ENST00000583965 POLR3BQ9NW08 1133 aaPredicted RBP11.73□□□□□ -0.53
CDRT1-207ENST00000583965 C2orf42Q9NWW7 574 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 USP36Q9P275 1121 aaKnown RBP11.73□□□□□ -0.53
CDRT1-207ENST00000583965 DMGDHQ9UI17 866 aaKnown RBP11.73□□□□□ -0.53
CDRT1-207ENST00000583965 ANAPC5Q9UJX4 755 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 NCKAP1Q9Y2A7 1128 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 SNX24Q9Y343 169 aa11.73□□□□□ -0.53
CDRT1-207ENST00000583965 CCDC163A0A0D9SF12 145 aa11.72□□□□□ -0.53
CDRT1-207ENST00000583965 A0A0J9YYE9 177 aa11.72□□□□□ -0.53
CDRT1-207ENST00000583965 K7ESF4 209 aa11.72□□□□□ -0.53
CDRT1-207ENST00000583965 LAMTOR5O43504 91 aa11.72□□□□□ -0.53
CDRT1-207ENST00000583965 AP1G1O43747 822 aa11.72□□□□□ -0.53
CDRT1-207ENST00000583965 ZNF217O75362 1048 aa11.72□□□□□ -0.53
CDRT1-207ENST00000583965 TMEM63AO94886 807 aa11.72□□□□□ -0.53
CDRT1-207ENST00000583965 AGTP01019 485 aa11.72□□□□□ -0.53
CDRT1-207ENST00000583965 IGLV3-19P01714 112 aa11.72□□□□□ -0.53
CDRT1-207ENST00000583965 TRBC1P01850 177 aa11.72□□□□□ -0.53
CDRT1-207ENST00000583965 RHOXF2BP0C7M4 288 aa11.72□□□□□ -0.53
CDRT1-207ENST00000583965 ATXN1LP0C7T5 689 aaKnown RBP11.72□□□□□ -0.53
CDRT1-207ENST00000583965 ADRB3P13945 408 aa11.72□□□□□ -0.53
CDRT1-207ENST00000583965 TIMP2P16035 220 aa11.72□□□□□ -0.53
CDRT1-207ENST00000583965 P2RY2P41231 377 aa11.72□□□□□ -0.53
CDRT1-207ENST00000583965 METAP1P53582 386 aa11.72□□□□□ -0.53
CDRT1-207ENST00000583965 CNTN1Q12860 1018 aa11.72□□□□□ -0.53
CDRT1-207ENST00000583965 CUL1Q13616 776 aa11.72□□□□□ -0.53
CDRT1-207ENST00000583965 GALNT3Q14435 633 aa11.72□□□□□ -0.53
CDRT1-207ENST00000583965 SPARCL1Q14515 664 aa11.72□□□□□ -0.53
CDRT1-207ENST00000583965 QPCTQ16769 361 aa11.72□□□□□ -0.53
CDRT1-207ENST00000583965 KCTD19Q17RG1 926 aaPredicted RBP11.72□□□□□ -0.53
CDRT1-207ENST00000583965 POM121L1PQ3SYA9 428 aa11.72□□□□□ -0.53
CDRT1-207ENST00000583965 SIRPB2Q5JXA9 342 aa11.72□□□□□ -0.53
CDRT1-207ENST00000583965 SYCP2LQ5T4T6 812 aa11.72□□□□□ -0.53
CDRT1-207ENST00000583965 ANKRD22Q5VYY1 191 aa11.72□□□□□ -0.53
CDRT1-207ENST00000583965 DENND5AQ6IQ26 1287 aa11.72□□□□□ -0.53
CDRT1-207ENST00000583965 ANO7Q6IWH7 933 aa11.72□□□□□ -0.53
CDRT1-207ENST00000583965 ERAP2Q6P179 960 aa11.72□□□□□ -0.53
CDRT1-207ENST00000583965 KDELC2Q7Z4H8 507 aa11.72□□□□□ -0.53
CDRT1-207ENST00000583965 TTC7BQ86TV6 843 aa11.72□□□□□ -0.53
CDRT1-207ENST00000583965 ZSWIM9Q86XI8 627 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms