RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 TIMM44O43615 452 aa18.67■□□□□ 0.58
PRKCA-203ENST00000578063 LDB2O43679 373 aa18.67■□□□□ 0.58
PRKCA-203ENST00000578063 KRT38O76015 456 aa18.67■□□□□ 0.58
PRKCA-203ENST00000578063 CRTAMO95727 393 aa18.67■□□□□ 0.58
PRKCA-203ENST00000578063 CNTFP26441 200 aa18.67■□□□□ 0.58
PRKCA-203ENST00000578063 RECQLP46063 649 aaPredicted RBP18.67■□□□□ 0.58
PRKCA-203ENST00000578063 CBX1P83916 185 aa18.67■□□□□ 0.58
PRKCA-203ENST00000578063 QPCTQ16769 361 aa18.67■□□□□ 0.58
PRKCA-203ENST00000578063 PREPLQ4J6C6 727 aaPredicted RBP18.67■□□□□ 0.58
PRKCA-203ENST00000578063 CAMK1DQ8IU85 385 aa18.67■□□□□ 0.58
PRKCA-203ENST00000578063 CYB5D2Q8WUJ1 264 aa18.67■□□□□ 0.58
PRKCA-203ENST00000578063 MTBPQ96DY7 904 aa18.67■□□□□ 0.58
PRKCA-203ENST00000578063 CPNE1Q99829 537 aa18.67■□□□□ 0.58
PRKCA-203ENST00000578063 CPEB1Q9BZB8 566 aaKnown RBP18.67■□□□□ 0.58
PRKCA-203ENST00000578063 ELOVL2Q9NXB9 296 aa18.67■□□□□ 0.58
PRKCA-203ENST00000578063 HACD3Q9P035 362 aa18.67■□□□□ 0.58
PRKCA-203ENST00000578063 PCDHB9Q9Y5E1 797 aa18.67■□□□□ 0.58
PRKCA-203ENST00000578063 COL4A3Q01955 1670 aa18.67■□□□□ 0.58
PRKCA-203ENST00000578063 TRAFD1O14545 582 aaPredicted RBP18.66■□□□□ 0.58
PRKCA-203ENST00000578063 RRP9O43818 475 aaKnown RBP18.66■□□□□ 0.58
PRKCA-203ENST00000578063 POP4O95707 220 aaKnown RBP18.66■□□□□ 0.58
PRKCA-203ENST00000578063 GJA4P35212 333 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 SLC6A11P48066 632 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 CCNHP51946 323 aaPredicted RBP18.66■□□□□ 0.58
PRKCA-203ENST00000578063 EPHB1P54762 984 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 ST8SIA6P61647 398 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 HTR4Q13639 388 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 CNGA3Q16281 694 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 ITPRIPL2Q3MIP1 535 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 HSP90AA5PQ58FG0 334 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 Q6ZVU0 165 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 SRRM1Q8IYB3 904 aaKnown RBP18.66■□□□□ 0.58
PRKCA-203ENST00000578063 TERB1Q8NA31 727 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 KDM1BQ8NB78 822 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 GABPB2Q8TAK5 448 aaPredicted RBP18.66■□□□□ 0.58
PRKCA-203ENST00000578063 MZB1Q8WU39 189 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 CNOT10Q9H9A5 744 aaKnown RBP18.66■□□□□ 0.58
PRKCA-203ENST00000578063 GTSE1Q9NYZ3 720 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 IL1RAPL1Q9NZN1 696 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 SLC2A6Q9UGQ3 507 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 NUMBLQ9Y6R0 609 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 WASH3PC4AMC7 463 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 ANHXE9PGG2 379 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 UGT1A9O60656 530 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 VAPBO95292 243 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 PIGNO95427 931 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 SNRPAP09012 282 aaKnown RBP18.66■□□□□ 0.58
PRKCA-203ENST00000578063 GP5P40197 560 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 ARCN1P48444 511 aaKnown RBP18.66■□□□□ 0.58
PRKCA-203ENST00000578063 ACVR1Q04771 509 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 KDSRQ06136 332 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 TAF1AQ15573 450 aaPredicted RBP18.66■□□□□ 0.58
PRKCA-203ENST00000578063 PTPRNQ16849 979 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 TEDDM1Q5T9Z0 273 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 PACS1Q6VY07 963 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 DPY19L3Q6ZPD9 716 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 GLT6D1Q7Z4J2 308 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 CNTN4Q8IWV2 1026 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 FRS2Q8WU20 508 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 SORCS1Q8WY21 1168 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 SRPK1Q96SB4 655 aaKnown RBP18.66■□□□□ 0.58
PRKCA-203ENST00000578063 FAM167BQ9BTA0 163 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 UGT1A7Q9HAW7 530 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 UGT1A10Q9HAW8 530 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 UGT1A8Q9HAW9 530 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 PLA2G4CQ9UP65 541 aa18.66■□□□□ 0.58
PRKCA-203ENST00000578063 REV3LO60673 3130 aa18.65■□□□□ 0.58
PRKCA-203ENST00000578063 A0A1W2PQ67 120 aa18.65■□□□□ 0.58
PRKCA-203ENST00000578063 H3BQ06 376 aaPredicted RBP18.65■□□□□ 0.58
PRKCA-203ENST00000578063 ARNTLO00327 626 aa18.65■□□□□ 0.58
PRKCA-203ENST00000578063 FAM155BO75949 473 aa18.65■□□□□ 0.58
PRKCA-203ENST00000578063 PRKCGP05129 697 aa18.65■□□□□ 0.58
PRKCA-203ENST00000578063 ARNTP27540 789 aa18.65■□□□□ 0.58
PRKCA-203ENST00000578063 OPRD1P41143 372 aa18.65■□□□□ 0.58
PRKCA-203ENST00000578063 GYS2P54840 703 aa18.65■□□□□ 0.58
PRKCA-203ENST00000578063 PDE1BQ01064 536 aa18.65■□□□□ 0.58
PRKCA-203ENST00000578063 SMAD4Q13485 552 aaKnown RBP18.65■□□□□ 0.58
PRKCA-203ENST00000578063 PRPF38BQ5VTL8 546 aaKnown RBP18.65■□□□□ 0.58
PRKCA-203ENST00000578063 PHTF2Q8N3S3 785 aa18.65■□□□□ 0.58
PRKCA-203ENST00000578063 PAF1Q8N7H5 531 aa18.65■□□□□ 0.58
PRKCA-203ENST00000578063 OR13J1Q8NGT2 312 aa18.65■□□□□ 0.58
PRKCA-203ENST00000578063 OR2A12Q8NGT7 310 aa18.65■□□□□ 0.58
PRKCA-203ENST00000578063 STYXQ8WUJ0 223 aa18.65■□□□□ 0.58
PRKCA-203ENST00000578063 PIH1D2Q8WWB5 315 aa18.65■□□□□ 0.58
PRKCA-203ENST00000578063 SPOCK2Q92563 424 aa18.65■□□□□ 0.58
PRKCA-203ENST00000578063 ZNF641Q96N77 438 aaPredicted RBP18.65■□□□□ 0.58
PRKCA-203ENST00000578063 TRABDQ9H4I3 376 aa18.65■□□□□ 0.58
PRKCA-203ENST00000578063 IARS2Q9NSE4 1012 aaKnown RBP18.65■□□□□ 0.58
PRKCA-203ENST00000578063 SPO11Q9Y5K1 396 aa18.65■□□□□ 0.58
PRKCA-203ENST00000578063 ARL5AQ9Y689 179 aa18.65■□□□□ 0.58
PRKCA-203ENST00000578063 MYLKQ15746 1914 aa18.64■□□□□ 0.57
PRKCA-203ENST00000578063 C2orf81A6NN90 581 aa18.64■□□□□ 0.57
PRKCA-203ENST00000578063 PRRT4C9JH25 899 aa18.64■□□□□ 0.57
PRKCA-203ENST00000578063 SLC7A4O43246 635 aa18.64■□□□□ 0.57
PRKCA-203ENST00000578063 BNIP3LO60238 219 aa18.64■□□□□ 0.57
PRKCA-203ENST00000578063 SIN3BO75182 1162 aa18.64■□□□□ 0.57
PRKCA-203ENST00000578063 PIRTP0C851 137 aa18.64■□□□□ 0.57
PRKCA-203ENST00000578063 THOC5Q13769 683 aaKnown RBP18.64■□□□□ 0.57
PRKCA-203ENST00000578063 GRTP1Q5TC63 336 aa18.64■□□□□ 0.57
PRKCA-203ENST00000578063 CALML6Q8TD86 181 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms