RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 CCDC189A1A4V9 331 aa5.41□□□□□ -1.54
NUP88-213ENST00000576862 NPIPB11E5RHQ5 1161 aa5.41□□□□□ -1.54
NUP88-213ENST00000576862 TAF4O00268 1085 aa5.41□□□□□ -1.54
NUP88-213ENST00000576862 IKBKBO14920 756 aa5.41□□□□□ -1.54
NUP88-213ENST00000576862 KCNJ13O60928 360 aa5.41□□□□□ -1.54
NUP88-213ENST00000576862 SERPINI2O75830 405 aa5.41□□□□□ -1.54
NUP88-213ENST00000576862 PAPSS2O95340 614 aaPredicted RBP5.41□□□□□ -1.54
NUP88-213ENST00000576862 PPP1R3DO95685 299 aa5.41□□□□□ -1.54
NUP88-213ENST00000576862 POU1F1P28069 291 aa5.41□□□□□ -1.54
NUP88-213ENST00000576862 RPL3P39023 403 aaKnown RBP5.41□□□□□ -1.54
NUP88-213ENST00000576862 HDAC4P56524 1084 aa5.41□□□□□ -1.54
NUP88-213ENST00000576862 KIF5AQ12840 1032 aa5.41□□□□□ -1.54
NUP88-213ENST00000576862 TRAF2Q12933 501 aa5.41□□□□□ -1.54
NUP88-213ENST00000576862 KEAP1Q14145 624 aa5.41□□□□□ -1.54
NUP88-213ENST00000576862 VEPH1Q14D04 833 aa5.41□□□□□ -1.54
NUP88-213ENST00000576862 RNPS1Q15287 305 aaKnown RBP5.41□□□□□ -1.54
NUP88-213ENST00000576862 FAM69AQ5T7M9 428 aa5.41□□□□□ -1.54
NUP88-213ENST00000576862 NOC3LQ8WTT2 800 aaKnown RBP5.41□□□□□ -1.54
NUP88-213ENST00000576862 MEIS3Q99687 375 aa5.41□□□□□ -1.54
NUP88-213ENST00000576862 IL25Q9H293 177 aa5.41□□□□□ -1.54
NUP88-213ENST00000576862 UBN1Q9NPG3 1134 aa5.41□□□□□ -1.54
NUP88-213ENST00000576862 KCND2Q9NZV8 630 aa5.41□□□□□ -1.54
NUP88-213ENST00000576862 NAALADL1Q9UQQ1 740 aa5.41□□□□□ -1.54
NUP88-213ENST00000576862 CKAP5Q14008 2032 aa5.4□□□□□ -1.54
NUP88-213ENST00000576862 A0A0U1RQJ8 604 aa5.4□□□□□ -1.54
NUP88-213ENST00000576862 SRRM3A6NNA2 597 aaPredicted RBP5.4□□□□□ -1.54
NUP88-213ENST00000576862 TSPAN4O14817 238 aa5.4□□□□□ -1.54
NUP88-213ENST00000576862 WNT9BO14905 357 aa5.4□□□□□ -1.54
NUP88-213ENST00000576862 NPHP1O15259 732 aa5.4□□□□□ -1.54
NUP88-213ENST00000576862 HSPA12AO43301 675 aa5.4□□□□□ -1.54
NUP88-213ENST00000576862 TNFSF14O43557 240 aa5.4□□□□□ -1.54
NUP88-213ENST00000576862 FCGR1AP12314 374 aa5.4□□□□□ -1.54
NUP88-213ENST00000576862 ETFAP13804 333 aa5.4□□□□□ -1.54
NUP88-213ENST00000576862 AGAP20933 346 aa5.4□□□□□ -1.54
NUP88-213ENST00000576862 PAFAH1B1P43034 410 aa5.4□□□□□ -1.54
NUP88-213ENST00000576862 GRSF1Q12849 480 aaKnown RBP eCLIP5.4□□□□□ -1.54
NUP88-213ENST00000576862 NFATC4Q14934 902 aa5.4□□□□□ -1.54
NUP88-213ENST00000576862 SGO1Q5FBB7 561 aa5.4□□□□□ -1.54
NUP88-213ENST00000576862 FAM69BQ5VUD6 431 aa5.4□□□□□ -1.54
NUP88-213ENST00000576862 DLK2Q6UY11 383 aa5.4□□□□□ -1.54
NUP88-213ENST00000576862 RRM2BQ7LG56 351 aa5.4□□□□□ -1.54
NUP88-213ENST00000576862 SHFQ7M4L6 423 aa5.4□□□□□ -1.54
NUP88-213ENST00000576862 ADHFE1Q8IWW8 467 aa5.4□□□□□ -1.54
NUP88-213ENST00000576862 KIF1BPQ96EK5 621 aa5.4□□□□□ -1.54
NUP88-213ENST00000576862 SIN3AQ96ST3 1273 aa5.4□□□□□ -1.54
NUP88-213ENST00000576862 KRTAP1-5Q9BYS1 174 aa5.4□□□□□ -1.54
NUP88-213ENST00000576862 SLC25A18Q9H1K4 315 aa5.4□□□□□ -1.54
NUP88-213ENST00000576862 OCIAD1Q9NX40 245 aa5.4□□□□□ -1.54
NUP88-213ENST00000576862 CISD1Q9NZ45 108 aaKnown RBP5.4□□□□□ -1.54
NUP88-213ENST00000576862 MPP6Q9NZW5 540 aa5.4□□□□□ -1.54
NUP88-213ENST00000576862 SARDHQ9UL12 918 aa5.4□□□□□ -1.54
NUP88-213ENST00000576862 ARHGAP26Q9UNA1 814 aa5.4□□□□□ -1.54
NUP88-213ENST00000576862 ABCC8Q09428 1581 aa5.39□□□□□ -1.55
NUP88-213ENST00000576862 NDUFB4O95168 129 aa5.39□□□□□ -1.55
NUP88-213ENST00000576862 CH25HO95992 272 aa5.39□□□□□ -1.55
NUP88-213ENST00000576862 TFP02787 698 aa5.39□□□□□ -1.55
NUP88-213ENST00000576862 SEC61A1P61619 476 aaKnown RBP5.39□□□□□ -1.55
NUP88-213ENST00000576862 EFHC1Q5JVL4 640 aa5.39□□□□□ -1.55
NUP88-213ENST00000576862 NADSYN1Q6IA69 706 aa5.39□□□□□ -1.55
NUP88-213ENST00000576862 ACAD10Q6JQN1 1059 aa5.39□□□□□ -1.55
NUP88-213ENST00000576862 TSPYL6Q8N831 410 aa5.39□□□□□ -1.55
NUP88-213ENST00000576862 ZUFSPQ96AP4 578 aa5.39□□□□□ -1.55
NUP88-213ENST00000576862 OTULINQ96BN8 352 aa5.39□□□□□ -1.55
NUP88-213ENST00000576862 LRFN5Q96NI6 719 aa5.39□□□□□ -1.55
NUP88-213ENST00000576862 BBS4Q96RK4 519 aa5.39□□□□□ -1.55
NUP88-213ENST00000576862 FIZ1Q96SL8 496 aa5.39□□□□□ -1.55
NUP88-213ENST00000576862 TM6SF1Q9BZW5 370 aa5.39□□□□□ -1.55
NUP88-213ENST00000576862 USP44Q9H0E7 712 aa5.39□□□□□ -1.55
NUP88-213ENST00000576862 PLEKHA4Q9H4M7 779 aa5.39□□□□□ -1.55
NUP88-213ENST00000576862 VEZTQ9HBM0 779 aa5.39□□□□□ -1.55
NUP88-213ENST00000576862 A4GNTQ9UNA3 340 aa5.39□□□□□ -1.55
NUP88-213ENST00000576862 FAM96BQ9Y3D0 163 aa5.39□□□□□ -1.55
NUP88-213ENST00000576862 LSM4Q9Y4Z0 139 aaKnown RBP5.39□□□□□ -1.55
NUP88-213ENST00000576862 MT-CYBP00156 380 aaPredicted RBP5.38□□□□□ -1.55
NUP88-213ENST00000576862 ATP1A3P13637 1013 aa5.38□□□□□ -1.55
NUP88-213ENST00000576862 CHATP28329 748 aa5.38□□□□□ -1.55
NUP88-213ENST00000576862 EPHA8P29322 1005 aaPredicted RBP5.38□□□□□ -1.55
NUP88-213ENST00000576862 SHMT1P34896 483 aa5.38□□□□□ -1.55
NUP88-213ENST00000576862 PPP2R5BQ15173 497 aa5.38□□□□□ -1.55
NUP88-213ENST00000576862 EFNB3Q15768 340 aa5.38□□□□□ -1.55
NUP88-213ENST00000576862 ASIC2Q16515 512 aa5.38□□□□□ -1.55
NUP88-213ENST00000576862 HLFQ16534 295 aa5.38□□□□□ -1.55
NUP88-213ENST00000576862 HIST2H2ACQ16777 129 aaPredicted RBP5.38□□□□□ -1.55
NUP88-213ENST00000576862 SETMARQ53H47 684 aaPredicted RBP5.38□□□□□ -1.55
NUP88-213ENST00000576862 ALFQ53S48 1182 aa5.38□□□□□ -1.55
NUP88-213ENST00000576862 INTS11Q5TA45 600 aaKnown RBP5.38□□□□□ -1.55
NUP88-213ENST00000576862 ANKRD54Q6NXT1 300 aa5.38□□□□□ -1.55
NUP88-213ENST00000576862 FBXO46Q6PJ61 603 aaPredicted RBP5.38□□□□□ -1.55
NUP88-213ENST00000576862 CPLX2Q6PUV4 134 aaKnown RBP5.38□□□□□ -1.55
NUP88-213ENST00000576862 KLHL24Q6TFL4 600 aa5.38□□□□□ -1.55
NUP88-213ENST00000576862 MMS22LQ6ZRQ5 1243 aa5.38□□□□□ -1.55
NUP88-213ENST00000576862 ARMC9Q7Z3E5 817 aa5.38□□□□□ -1.55
NUP88-213ENST00000576862 TDRPQ86YL5 185 aa5.38□□□□□ -1.55
NUP88-213ENST00000576862 SLC35F3Q8IY50 421 aa5.38□□□□□ -1.55
NUP88-213ENST00000576862 TCP11L2Q8N4U5 519 aa5.38□□□□□ -1.55
NUP88-213ENST00000576862 NFKBIDQ8NI38 313 aa5.38□□□□□ -1.55
NUP88-213ENST00000576862 LMO3Q8TAP4 145 aa5.38□□□□□ -1.55
NUP88-213ENST00000576862 FBXL8Q96CD0 374 aa5.38□□□□□ -1.55
NUP88-213ENST00000576862 KLHL29Q96CT2 875 aa5.38□□□□□ -1.55
NUP88-213ENST00000576862 TKTL2Q9H0I9 626 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms