RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 CDCA5Q96FF9 252 aa17.34■□□□□ 0.37
TOM1L1-221ENST00000575882 SLC25A23Q9BV35 468 aa17.34■□□□□ 0.37
TOM1L1-221ENST00000575882 TSPYL2Q9H2G4 693 aaPredicted RBP17.34■□□□□ 0.37
TOM1L1-221ENST00000575882 ENTPD7Q9NQZ7 604 aa17.34■□□□□ 0.37
TOM1L1-221ENST00000575882 GALNT8Q9NY28 637 aa17.34■□□□□ 0.37
TOM1L1-221ENST00000575882 RSL24D1Q9UHA3 163 aaKnown RBP17.34■□□□□ 0.37
TOM1L1-221ENST00000575882 CROTQ9UKG9 612 aa17.34■□□□□ 0.37
TOM1L1-221ENST00000575882 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.34■□□□□ 0.37
TOM1L1-221ENST00000575882 BPTFQ12830 3046 aa17.33■□□□□ 0.37
TOM1L1-221ENST00000575882 MAFKO60675 156 aa17.33■□□□□ 0.36
TOM1L1-221ENST00000575882 HLA-DQB2P05538 268 aa17.33■□□□□ 0.36
TOM1L1-221ENST00000575882 CCDC166P0CW27 439 aa17.33■□□□□ 0.36
TOM1L1-221ENST00000575882 GJA5P36382 358 aa17.33■□□□□ 0.36
TOM1L1-221ENST00000575882 LHX1P48742 406 aa17.33■□□□□ 0.36
TOM1L1-221ENST00000575882 SAMD4BQ5PRF9 694 aaKnown RBP17.33■□□□□ 0.36
TOM1L1-221ENST00000575882 FAM43BQ6ZT52 329 aaPredicted RBP17.33■□□□□ 0.36
TOM1L1-221ENST00000575882 DQX1Q8TE96 717 aaKnown RBP17.33■□□□□ 0.36
TOM1L1-221ENST00000575882 SMARCD1Q96GM5 515 aa17.33■□□□□ 0.36
TOM1L1-221ENST00000575882 UHRF1Q96T88 793 aaPredicted RBP17.33■□□□□ 0.36
TOM1L1-221ENST00000575882 SLC39A3Q9BRY0 314 aa17.33■□□□□ 0.36
TOM1L1-221ENST00000575882 TMEM181Q9P2C4 612 aa17.33■□□□□ 0.36
TOM1L1-221ENST00000575882 IPO11Q9UI26 975 aaKnown RBP17.33■□□□□ 0.36
TOM1L1-221ENST00000575882 MYRFQ9Y2G1 1151 aa17.33■□□□□ 0.36
TOM1L1-221ENST00000575882 FNDC1Q4ZHG4 1894 aaPredicted RBP17.33■□□□□ 0.36
TOM1L1-221ENST00000575882 H3BNH8 94 aa17.32■□□□□ 0.36
TOM1L1-221ENST00000575882 MATN3O15232 486 aa17.32■□□□□ 0.36
TOM1L1-221ENST00000575882 DYNC1LI2O43237 492 aaPredicted RBP17.32■□□□□ 0.36
TOM1L1-221ENST00000575882 NRP2O60462 931 aa17.32■□□□□ 0.36
TOM1L1-221ENST00000575882 LTA4HP09960 611 aaKnown RBP17.32■□□□□ 0.36
TOM1L1-221ENST00000575882 YWHAQP27348 245 aa17.32■□□□□ 0.36
TOM1L1-221ENST00000575882 DUS3LQ96G46 650 aaKnown RBP17.32■□□□□ 0.36
TOM1L1-221ENST00000575882 EFHD1Q9BUP0 239 aa17.32■□□□□ 0.36
TOM1L1-221ENST00000575882 SLC39A8Q9C0K1 460 aa17.32■□□□□ 0.36
TOM1L1-221ENST00000575882 PNPLA3Q9NST1 481 aa17.32■□□□□ 0.36
TOM1L1-221ENST00000575882 RBM22Q9NW64 420 aaKnown RBP eCLIP17.32■□□□□ 0.365e-6■■■■■ 31.7
TOM1L1-221ENST00000575882 PTCH2Q9Y6C5 1203 aa17.32■□□□□ 0.36
TOM1L1-221ENST00000575882 ZNF839A8K0R7 811 aa17.32■□□□□ 0.36
TOM1L1-221ENST00000575882 MEIS3P2A8K0S8 358 aa17.32■□□□□ 0.36
TOM1L1-221ENST00000575882 TIPRLO75663 272 aa17.32■□□□□ 0.36
TOM1L1-221ENST00000575882 F2P00734 622 aa17.32■□□□□ 0.36
TOM1L1-221ENST00000575882 SLC7A2P52569 658 aa17.32■□□□□ 0.36
TOM1L1-221ENST00000575882 PCSK7Q16549 785 aa17.32■□□□□ 0.36
TOM1L1-221ENST00000575882 NOMO2Q5JPE7 1267 aa17.32■□□□□ 0.36
TOM1L1-221ENST00000575882 CLEC6AQ6EIG7 209 aa17.32■□□□□ 0.36
TOM1L1-221ENST00000575882 FAM45BPQ6NSW5 357 aa17.32■□□□□ 0.36
TOM1L1-221ENST00000575882 DHFR2Q86XF0 187 aa17.32■□□□□ 0.36
TOM1L1-221ENST00000575882 FAM45AQ8TCE6 357 aa17.32■□□□□ 0.36
TOM1L1-221ENST00000575882 RMND5BQ96G75 393 aaPredicted RBP17.32■□□□□ 0.36
TOM1L1-221ENST00000575882 MRGPRX2Q96LB1 330 aa17.32■□□□□ 0.36
TOM1L1-221ENST00000575882 OLAHQ9NV23 265 aa17.32■□□□□ 0.36
TOM1L1-221ENST00000575882 IRAK4Q9NWZ3 460 aa17.32■□□□□ 0.36
TOM1L1-221ENST00000575882 GMPR2Q9P2T1 348 aaKnown RBP17.32■□□□□ 0.36
TOM1L1-221ENST00000575882 TRAF6Q9Y4K3 522 aa17.32■□□□□ 0.36
TOM1L1-221ENST00000575882 hCG_2014768A0A024R1R8 64 aa17.31■□□□□ 0.36
TOM1L1-221ENST00000575882 ATP6AP2A0A1C7CYW4 349 aa17.31■□□□□ 0.36
TOM1L1-221ENST00000575882 TREHO43280 583 aa17.31■□□□□ 0.36
TOM1L1-221ENST00000575882 HTRA2O43464 458 aaPredicted RBP17.31■□□□□ 0.36
TOM1L1-221ENST00000575882 ATP6AP2O75787 350 aa17.31■□□□□ 0.36
TOM1L1-221ENST00000575882 CKMT2P17540 419 aa17.31■□□□□ 0.36
TOM1L1-221ENST00000575882 ALDH3B2P48448 385 aa17.31■□□□□ 0.36
TOM1L1-221ENST00000575882 PITRM1Q5JRX3 1037 aa17.31■□□□□ 0.36
TOM1L1-221ENST00000575882 ZBTB49Q6ZSB9 765 aa17.31■□□□□ 0.36
TOM1L1-221ENST00000575882 KIAA0408Q6ZU52 694 aa17.31■□□□□ 0.36
TOM1L1-221ENST00000575882 PNPLA1Q8N8W4 532 aa17.31■□□□□ 0.36
TOM1L1-221ENST00000575882 GAB3Q8WWW8 586 aa17.31■□□□□ 0.36
TOM1L1-221ENST00000575882 MAML3Q96JK9 1138 aa17.31■□□□□ 0.36
TOM1L1-221ENST00000575882 RANBP9Q96S59 729 aa17.31■□□□□ 0.36
TOM1L1-221ENST00000575882 PRKD2Q9BZL6 878 aa17.31■□□□□ 0.36
TOM1L1-221ENST00000575882 PLOD2O00469 737 aa17.31■□□□□ 0.36
TOM1L1-221ENST00000575882 UBFD1O14562 309 aaKnown RBP17.31■□□□□ 0.36
TOM1L1-221ENST00000575882 RBP1P09455 135 aa17.31■□□□□ 0.36
TOM1L1-221ENST00000575882 TSPAN8P19075 237 aa17.31■□□□□ 0.36
TOM1L1-221ENST00000575882 C8orf82Q6P1X6 216 aaPredicted RBP17.31■□□□□ 0.36
TOM1L1-221ENST00000575882 RANBP10Q6VN20 620 aa17.31■□□□□ 0.36
TOM1L1-221ENST00000575882 TMEM86AQ8N2M4 240 aa17.31■□□□□ 0.36
TOM1L1-221ENST00000575882 ABHD16BQ9H3Z7 469 aa17.31■□□□□ 0.36
TOM1L1-221ENST00000575882 GSTO2Q9H4Y5 243 aa17.31■□□□□ 0.36
TOM1L1-221ENST00000575882 FBRSL1Q9HCM7 1045 aaKnown RBP17.31■□□□□ 0.36
TOM1L1-221ENST00000575882 NDFIP2Q9NV92 336 aa17.31■□□□□ 0.36
TOM1L1-221ENST00000575882 CDH9Q9ULB4 789 aa17.31■□□□□ 0.36
TOM1L1-221ENST00000575882 AKAP10O43572 662 aa17.3■□□□□ 0.36
TOM1L1-221ENST00000575882 STAMBPO95630 424 aa17.3■□□□□ 0.36
TOM1L1-221ENST00000575882 CLCNKBP51801 687 aa17.3■□□□□ 0.36
TOM1L1-221ENST00000575882 MAP7D1Q3KQU3 841 aa17.3■□□□□ 0.36
TOM1L1-221ENST00000575882 IQSEC1Q6DN90 963 aa17.3■□□□□ 0.36
TOM1L1-221ENST00000575882 LPCAT2Q7L5N7 544 aa17.3■□□□□ 0.36
TOM1L1-221ENST00000575882 FAM110BQ8TC76 370 aa17.3■□□□□ 0.36
TOM1L1-221ENST00000575882 ANKRD49Q8WVL7 239 aa17.3■□□□□ 0.36
TOM1L1-221ENST00000575882 ANKRD60Q9BZ19 345 aa17.3■□□□□ 0.36
TOM1L1-221ENST00000575882 UPF3AQ9H1J1 476 aaKnown RBP17.3■□□□□ 0.36
TOM1L1-221ENST00000575882 PCNTO95613 3336 aa17.3■□□□□ 0.36
TOM1L1-221ENST00000575882 SOCS2O14508 198 aa17.3■□□□□ 0.36
TOM1L1-221ENST00000575882 GRIA3P42263 894 aa17.3■□□□□ 0.36
TOM1L1-221ENST00000575882 CDK9P50750 372 aaKnown RBP17.3■□□□□ 0.36
TOM1L1-221ENST00000575882 CLCN5P51795 746 aa17.3■□□□□ 0.36
TOM1L1-221ENST00000575882 NDST2P52849 883 aa17.3■□□□□ 0.36
TOM1L1-221ENST00000575882 GALNT1Q10472 559 aaPredicted RBP17.3■□□□□ 0.36
TOM1L1-221ENST00000575882 MFSD10Q14728 455 aa17.3■□□□□ 0.36
TOM1L1-221ENST00000575882 ACAP2Q15057 778 aa17.3■□□□□ 0.36
TOM1L1-221ENST00000575882 HACD2Q6Y1H2 254 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms