RNA–Protein interactions for RNA: ENST00000565205.5

TRAPPC2L-209, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 1 (best)

Gene TRAPPC2L, Length 1,084 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-209ENST00000565205 PDZD3Q86UT5 571 aa13.08□□□□□ -0.32
TRAPPC2L-209ENST00000565205 DCP2Q8IU60 420 aaKnown RBP13.08□□□□□ -0.32
TRAPPC2L-209ENST00000565205 TXLNBQ8N3L3 684 aa13.08□□□□□ -0.32
TRAPPC2L-209ENST00000565205 RHBDD1Q8TEB9 315 aa13.08□□□□□ -0.32
TRAPPC2L-209ENST00000565205 RAPGEF5Q92565 580 aa13.08□□□□□ -0.32
TRAPPC2L-209ENST00000565205 VOPP1Q96AW1 172 aa13.08□□□□□ -0.32
TRAPPC2L-209ENST00000565205 RNF157Q96PX1 679 aa13.08□□□□□ -0.32
TRAPPC2L-209ENST00000565205 NUDCD1Q96RS6 583 aa13.08□□□□□ -0.32
TRAPPC2L-209ENST00000565205 CDC6Q99741 560 aa13.08□□□□□ -0.32
TRAPPC2L-209ENST00000565205 MGME1Q9BQP7 344 aa13.08□□□□□ -0.32
TRAPPC2L-209ENST00000565205 C1QTNF2Q9BXJ5 285 aa13.08□□□□□ -0.32
TRAPPC2L-209ENST00000565205 GGT7Q9UJ14 662 aa13.08□□□□□ -0.32
TRAPPC2L-209ENST00000565205 CA5BQ9Y2D0 317 aa13.08□□□□□ -0.32
TRAPPC2L-209ENST00000565205 ATP8A1Q9Y2Q0 1164 aa13.08□□□□□ -0.32
TRAPPC2L-209ENST00000565205 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.08□□□□□ -0.32
TRAPPC2L-209ENST00000565205 GPSM3Q9Y4H4 160 aa13.08□□□□□ -0.32
TRAPPC2L-209ENST00000565205 HS3ST3A1Q9Y663 406 aa13.08□□□□□ -0.32
TRAPPC2L-209ENST00000565205 APOL1O14791 398 aa13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 MUSKO15146 869 aa13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 SPINT1O43278 529 aa13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 BUB1BO60566 1050 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 PEX11BO96011 259 aa13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 CCNCP24863 283 aa13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 RABIFP47224 123 aa13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 RXRGP48443 463 aa13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 CLDN2P57739 230 aa13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 IL9RQ01113 521 aa13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 FGL2Q14314 439 aa13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 TRIP6Q15654 476 aaKnown RBP13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 TMEM52BQ4KMG9 183 aa13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 C11orf63Q6NUN7 778 aa13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 GCNT7Q6ZNI0 430 aa13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 KIAA1328Q86T90 577 aa13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 SPATS2Q86XZ4 545 aaKnown RBP13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 RFX6Q8HWS3 928 aa13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 PQLC3Q8N755 202 aa13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 CCNYQ8ND76 341 aa13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 OR13H1Q8NG92 308 aa13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 FATE1Q969F0 183 aa13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 HDAC11Q96DB2 347 aa13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 ECHDC3Q96DC8 303 aa13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 CAMK1GQ96NX5 476 aa13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 TSGA13Q96PP4 275 aa13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 LENG8Q96PV6 779 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 BAG1Q99933 345 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 WRAP53Q9BUR4 548 aaKnown RBP13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 POLR1EQ9GZS1 481 aaKnown RBP13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 PCDH12Q9NPG4 1184 aa13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 AMACRQ9UHK6 382 aa13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 PCOLCE2Q9UKZ9 415 aa13.07□□□□□ -0.32
TRAPPC2L-209ENST00000565205 SPAARA0A1B0GVQ0 90 aa13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 RIOK3O14730 519 aaKnown RBP13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 PPP1R12AO14974 1030 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 MATN3O15232 486 aa13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 MMP20O60882 483 aa13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 MAP3K6O95382 1288 aa13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 CPP00450 1065 aa13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 KRT10P13645 584 aa13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 CR2P20023 1033 aa13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 CA4P22748 312 aa13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 EPHA8P29322 1005 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 MMP12P39900 470 aa13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 NAP1L1P55209 391 aaKnown RBP13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 FAM193AP78312 1265 aa13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 GBE1Q04446 702 aa13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 ITKQ08881 620 aa13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 TFDP2Q14188 446 aa13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 COL28A1Q2UY09 1125 aa13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 DBX2Q6ZNG2 339 aa13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 Q6ZSR6 202 aa13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 GLRX5Q86SX6 157 aa13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 DAAM2Q86T65 1068 aa13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 CCDC13Q8IYE1 715 aa13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 TEX26Q8N6G2 289 aa13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 SPC24Q8NBT2 197 aa13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 PDCD6IPQ8WUM4 868 aaKnown RBP13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 MAML1Q92585 1016 aa13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 RNF25Q96BH1 459 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 IFT43Q96FT9 208 aa13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 NT5MQ9NPB1 228 aa13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 APOBEC2Q9Y235 224 aaKnown RBP13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 HYOU1Q9Y4L1 999 aa13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 TTLL3Q9Y4R7 772 aa13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 HEY1Q9Y5J3 304 aa13.06□□□□□ -0.32
TRAPPC2L-209ENST00000565205 LRRK1Q38SD2 2015 aa13.05□□□□□ -0.32
TRAPPC2L-209ENST00000565205 CFAP69A5D8W1 941 aa13.05□□□□□ -0.32
TRAPPC2L-209ENST00000565205 H3BM21 787 aa13.05□□□□□ -0.32
TRAPPC2L-209ENST00000565205 RAD51BO15315 384 aa13.05□□□□□ -0.32
TRAPPC2L-209ENST00000565205 LZTS3O60299 673 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC2L-209ENST00000565205 CBFA2T3O75081 653 aa13.05□□□□□ -0.32
TRAPPC2L-209ENST00000565205 TRIM16O95361 564 aa13.05□□□□□ -0.32
TRAPPC2L-209ENST00000565205 C6P13671 934 aa13.05□□□□□ -0.32
TRAPPC2L-209ENST00000565205 CCNB1P14635 433 aa13.05□□□□□ -0.32
TRAPPC2L-209ENST00000565205 CES1P23141 567 aa13.05□□□□□ -0.32
TRAPPC2L-209ENST00000565205 THOP1P52888 689 aa13.05□□□□□ -0.32
TRAPPC2L-209ENST00000565205 MAXP61244 160 aa13.05□□□□□ -0.32
TRAPPC2L-209ENST00000565205 PDK1Q15118 436 aa13.05□□□□□ -0.32
TRAPPC2L-209ENST00000565205 HS1BP3Q53T59 392 aa13.05□□□□□ -0.32
TRAPPC2L-209ENST00000565205 PRAMEF14Q5SWL7 426 aa13.05□□□□□ -0.32
TRAPPC2L-209ENST00000565205 SLC9A4Q6AI14 798 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms