RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 COPS5Q92905 334 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 CPNE4Q96A23 557 aaPredicted RBP4.98□□□□□ -1.61
TCF4-215ENST00000562638 PGAP3Q96FM1 320 aaPredicted RBP4.98□□□□□ -1.61
TCF4-215ENST00000562638 DCUN1D1Q96GG9 259 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 FUBP3Q96I24 572 aaKnown RBP eCLIP4.98□□□□□ -1.61
TCF4-215ENST00000562638 BTN2A3PQ96KV6 586 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 QRFPRQ96P65 431 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 CSPG4P5Q96PW8 444 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 CITED4Q96RK1 184 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 SERPINI1Q99574 410 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 MKNK1Q9BUB5 465 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 MENTQ9BUN1 341 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 DUSP26Q9BV47 211 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 CHID1Q9BWS9 393 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 PITPNM3Q9BZ71 974 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 CCDC86Q9H6F5 360 aaKnown RBP4.98□□□□□ -1.61
TCF4-215ENST00000562638 NOL6Q9H6R4 1146 aaKnown RBP4.98□□□□□ -1.61
TCF4-215ENST00000562638 ESRP2Q9H6T0 727 aaKnown RBP4.98□□□□□ -1.61
TCF4-215ENST00000562638 LDAHQ9H6V9 325 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 RANBP3Q9H6Z4 567 aaPredicted RBP4.98□□□□□ -1.61
TCF4-215ENST00000562638 RSAD1Q9HA92 442 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 ZDHHC4Q9NPG8 344 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 DDX4Q9NQI0 724 aaKnown RBP4.98□□□□□ -1.61
TCF4-215ENST00000562638 NPDC1Q9NQX5 325 aaPredicted RBP4.98□□□□□ -1.61
TCF4-215ENST00000562638 PCDHB16Q9NRJ7 776 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 OLA1Q9NTK5 396 aaKnown RBP4.98□□□□□ -1.61
TCF4-215ENST00000562638 BLOC1S4Q9NUP1 217 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 FBXO28Q9NVF7 368 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 THUMPD1Q9NXG2 353 aaKnown RBP4.98□□□□□ -1.61
TCF4-215ENST00000562638 TMOD2Q9NZR1 351 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 KANSL3Q9P2N6 904 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 PARP2Q9UGN5 583 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 GPN3Q9UHW5 284 aaPredicted RBP4.98□□□□□ -1.61
TCF4-215ENST00000562638 BTNL2Q9UIR0 455 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 PCDHGB4Q9UN71 923 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 RNF11Q9Y3C5 154 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 SAMHD1Q9Y3Z3 626 aaKnown RBP4.98□□□□□ -1.61
TCF4-215ENST00000562638 PCDHB3Q9Y5E6 796 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 PCDHGB5Q9Y5G0 923 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 PCDHA5Q9Y5H7 936 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 AP4B1Q9Y6B7 739 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 HSPE1-MOB4S4R3N1 261 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 HEG1Q9ULI3 1381 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 ADGRB1O14514 1584 aa4.98□□□□□ -1.61
TCF4-215ENST00000562638 MYO5AQ9Y4I1 1855 aaKnown RBP4.98□□□□□ -1.61
TCF4-215ENST00000562638 DLC1Q96QB1 1528 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 SYCP2Q9BX26 1530 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 PIK3C2AO00443 1686 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 ARHGAP23Q9P227 1491 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 TRBV23OR9-2A0A075B6M9 112 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 A0A087WXM4 84 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 TRABD2BA6NFA1 517 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 MFSD2BA6NFX1 497 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 CENPXA8MT69 81 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 A8MXE2 369 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 WDR64B1ANS9 1081 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 RNF223E7ERA6 249 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 WASLO00401 505 aaPredicted RBP4.97□□□□□ -1.61
TCF4-215ENST00000562638 EEF2KO00418 725 aaKnown RBP4.97□□□□□ -1.61
TCF4-215ENST00000562638 FPGTO14772 594 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 TSPAN4O14817 238 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 ZNF263O14978 683 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 ZBTB5O15062 677 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 CASC3O15234 703 aaKnown RBP4.97□□□□□ -1.61
TCF4-215ENST00000562638 SLC31A2O15432 143 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 HCRTR2O43614 444 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 SYNCRIPO60506 623 aaKnown RBP4.97□□□□□ -1.61
TCF4-215ENST00000562638 USP12O75317 370 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 GPX5O75715 221 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 IPO13O94829 963 aaKnown RBP4.97□□□□□ -1.61
TCF4-215ENST00000562638 TGM6O95932 706 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 IL1BP01584 269 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 TP53P04637 393 aaPredicted RBP4.97□□□□□ -1.61
TCF4-215ENST00000562638 UBTFL1P0CB47 393 aaPredicted RBP4.97□□□□□ -1.61
TCF4-215ENST00000562638 ARP10275 920 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 CYP2C8P10632 490 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 PSKH1P11801 424 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 MYCLP12524 364 aaPredicted RBP4.97□□□□□ -1.61
TCF4-215ENST00000562638 XRCC5P13010 732 aaKnown RBP4.97□□□□□ -1.61
TCF4-215ENST00000562638 PRG2P13727 222 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 SLC2A4P14672 509 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 JUNBP17275 347 aaPredicted RBP4.97□□□□□ -1.61
TCF4-215ENST00000562638 CYP2A7P20853 494 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 CBLP22681 906 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 UQCRC1P31930 480 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 GPX4P36969 197 aaPredicted RBP4.97□□□□□ -1.61
TCF4-215ENST00000562638 OPRL1P41146 370 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 YAP1P46937 504 aaKnown RBP4.97□□□□□ -1.61
TCF4-215ENST00000562638 RGS19P49795 217 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 HK3P52790 923 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 NRLP54845 237 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 WNT7BP56706 349 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 HUNKP57058 714 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 SLC26A5P58743 744 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 RBP5P82980 135 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 GNA12Q03113 381 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 ARID5AQ03989 594 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 KLRC3Q07444 240 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 DPYDQ12882 1025 aa4.97□□□□□ -1.61
TCF4-215ENST00000562638 SEMA3BQ13214 749 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms