RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 CSPG4P5Q96PW8 444 aa16.1■□□□□ 0.17
LMX1B-204ENST00000561065 NHEJ1Q9H9Q4 299 aaPredicted RBP16.1■□□□□ 0.17
LMX1B-204ENST00000561065 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.1■□□□□ 0.17
LMX1B-204ENST00000561065 IPO11Q9UI26 975 aaKnown RBP16.1■□□□□ 0.17
LMX1B-204ENST00000561065 GPSM3Q9Y4H4 160 aa16.1■□□□□ 0.17
LMX1B-204ENST00000561065 SMG1Q96Q15 3661 aaKnown RBP16.09■□□□□ 0.17
LMX1B-204ENST00000561065 RIOK3O14730 519 aaKnown RBP16.09■□□□□ 0.17
LMX1B-204ENST00000561065 SCAMP1O15126 338 aa16.09■□□□□ 0.17
LMX1B-204ENST00000561065 MFAP3LO75121 409 aa16.09■□□□□ 0.17
LMX1B-204ENST00000561065 PALMO75781 387 aa16.09■□□□□ 0.17
LMX1B-204ENST00000561065 RARAP10276 462 aa16.09■□□□□ 0.17
LMX1B-204ENST00000561065 CKMT1AP12532 417 aa16.09■□□□□ 0.17
LMX1B-204ENST00000561065 SERPINB6P35237 376 aa16.09■□□□□ 0.17
LMX1B-204ENST00000561065 HNF1BP35680 557 aa16.09■□□□□ 0.17
LMX1B-204ENST00000561065 DAB2P98082 770 aa16.09■□□□□ 0.17
LMX1B-204ENST00000561065 IL10RBQ08334 325 aa16.09■□□□□ 0.17
LMX1B-204ENST00000561065 SLC10A7Q0GE19 358 aa16.09■□□□□ 0.17
LMX1B-204ENST00000561065 TARDBPQ13148 414 aaKnown RBP eCLIP16.09■□□□□ 0.17
LMX1B-204ENST00000561065 WSCD2Q2TBF2 565 aa16.09■□□□□ 0.17
LMX1B-204ENST00000561065 SRLQ86TD4 932 aa16.09■□□□□ 0.17
LMX1B-204ENST00000561065 RHOT2Q8IXI1 618 aa16.09■□□□□ 0.17
LMX1B-204ENST00000561065 PDCD7Q8N8D1 485 aaKnown RBP16.09■□□□□ 0.17
LMX1B-204ENST00000561065 ZNF564Q8TBZ8 553 aaPredicted RBP16.09■□□□□ 0.17
LMX1B-204ENST00000561065 TUBGCP5Q96RT8 1024 aa16.09■□□□□ 0.17
LMX1B-204ENST00000561065 LRRC61Q9BV99 259 aa16.09■□□□□ 0.17
LMX1B-204ENST00000561065 CINPQ9BW66 212 aaPredicted RBP16.09■□□□□ 0.17
LMX1B-204ENST00000561065 PCDH18Q9HCL0 1135 aa16.09■□□□□ 0.17
LMX1B-204ENST00000561065 HAUS2Q9NVX0 235 aa16.09■□□□□ 0.17
LMX1B-204ENST00000561065 ATP8A1Q9Y2Q0 1164 aa16.09■□□□□ 0.17
LMX1B-204ENST00000561065 RP1P56715 2156 aa16.09■□□□□ 0.17
LMX1B-204ENST00000561065 TTC24A2A3L6 582 aaPredicted RBP16.08■□□□□ 0.16
LMX1B-204ENST00000561065 IPO7O95373 1038 aaKnown RBP16.08■□□□□ 0.16
LMX1B-204ENST00000561065 CELA2BP08218 269 aaPredicted RBP16.08■□□□□ 0.16
LMX1B-204ENST00000561065 KRT7P08729 469 aa16.08■□□□□ 0.16
LMX1B-204ENST00000561065 TMEM253P0C7T8 217 aa16.08■□□□□ 0.16
LMX1B-204ENST00000561065 CDK4P11802 303 aa16.08■□□□□ 0.16
LMX1B-204ENST00000561065 JUPP14923 745 aa16.08■□□□□ 0.16
LMX1B-204ENST00000561065 JUNDP17535 347 aa16.08■□□□□ 0.16
LMX1B-204ENST00000561065 GM2AP17900 193 aa16.08■□□□□ 0.16
LMX1B-204ENST00000561065 CSNK1DP48730 415 aa16.08■□□□□ 0.16
LMX1B-204ENST00000561065 ADKP55263 362 aaKnown RBP16.08■□□□□ 0.16
LMX1B-204ENST00000561065 ELP6Q0PNE2 266 aa16.08■□□□□ 0.16
LMX1B-204ENST00000561065 KRT81Q14533 505 aa16.08■□□□□ 0.16
LMX1B-204ENST00000561065 RFTN1Q14699 578 aaPredicted RBP16.08■□□□□ 0.16
LMX1B-204ENST00000561065 ODF2Q5BJF6 829 aa16.08■□□□□ 0.16
LMX1B-204ENST00000561065 KCTD16Q68DU8 428 aa16.08■□□□□ 0.16
LMX1B-204ENST00000561065 BRAT1Q6PJG6 821 aa16.08■□□□□ 0.16
LMX1B-204ENST00000561065 MACC1Q6ZN28 852 aa16.08■□□□□ 0.16
LMX1B-204ENST00000561065 LRRC49Q8IUZ0 686 aa16.08■□□□□ 0.16
LMX1B-204ENST00000561065 BBS5Q8N3I7 341 aa16.08■□□□□ 0.16
LMX1B-204ENST00000561065 PGBD5Q8N414 524 aa16.08■□□□□ 0.16
LMX1B-204ENST00000561065 HCAR2Q8TDS4 363 aa16.08■□□□□ 0.16
LMX1B-204ENST00000561065 NSMCE1Q8WV22 266 aa16.08■□□□□ 0.16
LMX1B-204ENST00000561065 ZNF641Q96N77 438 aaPredicted RBP16.08■□□□□ 0.16
LMX1B-204ENST00000561065 RCOR3Q9P2K3 495 aaPredicted RBP16.08■□□□□ 0.16
LMX1B-204ENST00000561065 INTUQ9ULD6 942 aa16.08■□□□□ 0.16
LMX1B-204ENST00000561065 URB1O60287 2271 aaKnown RBP16.07■□□□□ 0.16
LMX1B-204ENST00000561065 H3BM21 787 aa16.07■□□□□ 0.16
LMX1B-204ENST00000561065 TRAFD1O14545 582 aaPredicted RBP16.07■□□□□ 0.16
LMX1B-204ENST00000561065 AQP9O43315 295 aa16.07■□□□□ 0.16
LMX1B-204ENST00000561065 GCATO75600 419 aa16.07■□□□□ 0.16
LMX1B-204ENST00000561065 CD48P09326 243 aa16.07■□□□□ 0.16
LMX1B-204ENST00000561065 CR2P20023 1033 aa16.07■□□□□ 0.16
LMX1B-204ENST00000561065 XPAP23025 273 aaPredicted RBP16.07■□□□□ 0.16
LMX1B-204ENST00000561065 ARHGAP25P42331 645 aa16.07■□□□□ 0.16
LMX1B-204ENST00000561065 LIG3P49916 1009 aa16.07■□□□□ 0.16
LMX1B-204ENST00000561065 SUOXP51687 545 aa16.07■□□□□ 0.16
LMX1B-204ENST00000561065 LBRQ14739 615 aaKnown RBP16.07■□□□□ 0.16
LMX1B-204ENST00000561065 SPA17Q15506 151 aa16.07■□□□□ 0.16
LMX1B-204ENST00000561065 DEFB133Q30KQ1 61 aa16.07■□□□□ 0.16
LMX1B-204ENST00000561065 ZFYVE27Q5T4F4 411 aa16.07■□□□□ 0.16
LMX1B-204ENST00000561065 C19orf48Q6RUI8 117 aa16.07■□□□□ 0.16
LMX1B-204ENST00000561065 TMCO3Q6UWJ1 677 aa16.07■□□□□ 0.16
LMX1B-204ENST00000561065 PHACTR4Q8IZ21 702 aa16.07■□□□□ 0.16
LMX1B-204ENST00000561065 DCBLD1Q8N8Z6 715 aa16.07■□□□□ 0.16
LMX1B-204ENST00000561065 FAM181AQ8N9Y4 354 aa16.07■□□□□ 0.16
LMX1B-204ENST00000561065 LMX1AQ8TE12 382 aa16.07■□□□□ 0.16
LMX1B-204ENST00000561065 NXPE2Q96DL1 559 aa16.07■□□□□ 0.16
LMX1B-204ENST00000561065 MRFAP1L1Q96HT8 127 aa16.07■□□□□ 0.16
LMX1B-204ENST00000561065 PSKH2Q96QS6 385 aa16.07■□□□□ 0.16
LMX1B-204ENST00000561065 ATP13A3Q9H7F0 1226 aa16.07■□□□□ 0.16
LMX1B-204ENST00000561065 APOBEC3BQ9UH17 382 aaKnown RBP16.07■□□□□ 0.16
LMX1B-204ENST00000561065 CASC3O15234 703 aaKnown RBP16.06■□□□□ 0.16
LMX1B-204ENST00000561065 MAFKO60675 156 aa16.06■□□□□ 0.16
LMX1B-204ENST00000561065 ALPPL2P10696 532 aa16.06■□□□□ 0.16
LMX1B-204ENST00000561065 IL4RP24394 825 aa16.06■□□□□ 0.16
LMX1B-204ENST00000561065 SERPINA4P29622 427 aa16.06■□□□□ 0.16
LMX1B-204ENST00000561065 RENBPP51606 427 aa16.06■□□□□ 0.16
LMX1B-204ENST00000561065 ARSEP51690 589 aa16.06■□□□□ 0.16
LMX1B-204ENST00000561065 THOP1P52888 689 aa16.06■□□□□ 0.16
LMX1B-204ENST00000561065 MMRN1Q13201 1228 aa16.06■□□□□ 0.16
LMX1B-204ENST00000561065 C1orf61Q13536 156 aa16.06■□□□□ 0.16
LMX1B-204ENST00000561065 AGERQ15109 404 aa16.06■□□□□ 0.16
LMX1B-204ENST00000561065 PDK2Q15119 407 aa16.06■□□□□ 0.16
LMX1B-204ENST00000561065 GUSBP11Q6P575 273 aa16.06■□□□□ 0.16
LMX1B-204ENST00000561065 CCDC170Q8IYT3 715 aa16.06■□□□□ 0.16
LMX1B-204ENST00000561065 KCTD6Q8NC69 237 aa16.06■□□□□ 0.16
LMX1B-204ENST00000561065 C1QTNF7Q9BXJ2 289 aa16.06■□□□□ 0.16
LMX1B-204ENST00000561065 PACSIN1Q9BY11 444 aa16.06■□□□□ 0.16
LMX1B-204ENST00000561065 CLPBQ9H078 707 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms