RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 ACVR2AP27037 513 aa16.14■□□□□ 0.17
PBX1-219ENST00000560641 RAP1GAPP47736 663 aa16.14■□□□□ 0.17
PBX1-219ENST00000560641 PHC1P78364 1004 aa16.14■□□□□ 0.17
PBX1-219ENST00000560641 OR6B2Q6IFH4 312 aa16.14■□□□□ 0.17
PBX1-219ENST00000560641 PRR23CQ6ZRP0 262 aa16.14■□□□□ 0.17
PBX1-219ENST00000560641 LARP4Q71RC2 724 aaKnown RBP eCLIP16.14■□□□□ 0.17
PBX1-219ENST00000560641 TSPEARQ8WU66 669 aa16.14■□□□□ 0.17
PBX1-219ENST00000560641 ZNF669Q96BR6 464 aaPredicted RBP16.14■□□□□ 0.17
PBX1-219ENST00000560641 CCDC126Q96EE4 140 aa16.14■□□□□ 0.17
PBX1-219ENST00000560641 P2RY11Q96G91 374 aa16.14■□□□□ 0.17
PBX1-219ENST00000560641 KLHL25Q9H0H3 589 aa16.14■□□□□ 0.17
PBX1-219ENST00000560641 EML4Q9HC35 981 aaKnown RBP16.14■□□□□ 0.17
PBX1-219ENST00000560641 NECTIN3Q9NQS3 549 aa16.14■□□□□ 0.17
PBX1-219ENST00000560641 SACM1LQ9NTJ5 587 aa16.14■□□□□ 0.17
PBX1-219ENST00000560641 HMGXB4Q9UGU5 601 aa16.14■□□□□ 0.17
PBX1-219ENST00000560641 TNFRSF10AO00220 468 aa16.14■□□□□ 0.17
PBX1-219ENST00000560641 MAP3K6O95382 1288 aa16.14■□□□□ 0.17
PBX1-219ENST00000560641 PSMB4P28070 264 aa16.14■□□□□ 0.17
PBX1-219ENST00000560641 GRK3P35626 688 aa16.14■□□□□ 0.17
PBX1-219ENST00000560641 TIGD2Q4W5G0 525 aa16.14■□□□□ 0.17
PBX1-219ENST00000560641 SEZ6Q53EL9 994 aa16.14■□□□□ 0.17
PBX1-219ENST00000560641 PRSS48Q7RTY5 328 aa16.14■□□□□ 0.17
PBX1-219ENST00000560641 KCNMB4Q86W47 210 aa16.14■□□□□ 0.17
PBX1-219ENST00000560641 FUNDC1Q8IVP5 155 aa16.14■□□□□ 0.17
PBX1-219ENST00000560641 CDAN1Q8IWY9 1227 aa16.14■□□□□ 0.17
PBX1-219ENST00000560641 ACVR1CQ8NER5 493 aa16.14■□□□□ 0.17
PBX1-219ENST00000560641 MRPL57Q9BQC6 102 aaKnown RBP16.14■□□□□ 0.17
PBX1-219ENST00000560641 CLSTN3Q9BQT9 956 aa16.14■□□□□ 0.17
PBX1-219ENST00000560641 MRPL46Q9H2W6 279 aaKnown RBP16.14■□□□□ 0.17
PBX1-219ENST00000560641 MTRRQ9UBK8 725 aa16.14■□□□□ 0.17
PBX1-219ENST00000560641 VANGL2Q9ULK5 521 aa16.14■□□□□ 0.17
PBX1-219ENST00000560641 ZSWIM8A7E2V4 1837 aa16.14■□□□□ 0.17
PBX1-219ENST00000560641 C16orf96A6NNT2 1141 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 AP3B1O00203 1094 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 RGS20O76081 388 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 RPL34P49207 117 aaKnown RBP16.13■□□□□ 0.17
PBX1-219ENST00000560641 GRM3Q14832 879 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 CDO1Q16878 200 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 AASDHQ4L235 1098 aaPredicted RBP16.13■□□□□ 0.17
PBX1-219ENST00000560641 ARHGEF16Q5VV41 709 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 CNSTQ6PJW8 725 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 FUNDC2Q9BWH2 189 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 MAP10Q9P2G4 905 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 SLC27A5Q9Y2P5 690 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 THSD7AQ9UPZ6 1657 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 NRP1O14786 923 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 SEC24DO94855 1032 aaPredicted RBP16.13■□□□□ 0.17
PBX1-219ENST00000560641 ATP5F1P24539 256 aaPredicted RBP16.13■□□□□ 0.17
PBX1-219ENST00000560641 KPNA2P52292 529 aaKnown RBP16.13■□□□□ 0.17
PBX1-219ENST00000560641 OFCC1Q8IZS5 231 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 OSCP1Q8WVF1 389 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 SIAEQ9HAT2 523 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 HPS4Q9NQG7 708 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 BFARQ9NZS9 450 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 POU2F3Q9UKI9 436 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 AP4E1Q9UPM8 1137 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 PCDHA9Q9Y5H5 950 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 DICER1Q9UPY3 1922 aaKnown RBP16.13■□□□□ 0.17
PBX1-219ENST00000560641 FXYD1O00168 92 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 MATN4O95460 622 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 EEF1DP29692 281 aaKnown RBP16.13■□□□□ 0.17
PBX1-219ENST00000560641 ILF2Q12905 390 aaKnown RBP16.13■□□□□ 0.17
PBX1-219ENST00000560641 TOP3AQ13472 1001 aaPredicted RBP16.13■□□□□ 0.17
PBX1-219ENST00000560641 SELPLGQ14242 412 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 PAFAH1B3Q15102 231 aaKnown RBP16.13■□□□□ 0.17
PBX1-219ENST00000560641 SCYL2Q6P3W7 929 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 TRMT1LQ7Z2T5 733 aaKnown RBP16.13■□□□□ 0.17
PBX1-219ENST00000560641 ZNF567Q8N184 647 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 ELMOD1Q8N336 334 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 BPIFB1Q8TDL5 484 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 LRRN4Q8WUT4 740 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 LPAR1Q92633 364 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 DCPSQ96C86 337 aaKnown RBP16.13■□□□□ 0.17
PBX1-219ENST00000560641 HERC2P3Q9BVR0 1158 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 NGRNQ9NPE2 291 aaKnown RBP16.13■□□□□ 0.17
PBX1-219ENST00000560641 GDAP2Q9NXN4 497 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 RUVBL2Q9Y230 463 aaKnown RBP16.13■□□□□ 0.17
PBX1-219ENST00000560641 LCTP09848 1927 aa16.13■□□□□ 0.17
PBX1-219ENST00000560641 A0A087X1B8 175 aa16.12■□□□□ 0.17
PBX1-219ENST00000560641 E2F8A0AVK6 867 aa16.12■□□□□ 0.17
PBX1-219ENST00000560641 FARP2O94887 1054 aaPredicted RBP16.12■□□□□ 0.17
PBX1-219ENST00000560641 CD40LGP29965 261 aa16.12■□□□□ 0.17
PBX1-219ENST00000560641 SNX16P57768 344 aa16.12■□□□□ 0.17
PBX1-219ENST00000560641 BST2Q10589 180 aaKnown RBP16.12■□□□□ 0.17
PBX1-219ENST00000560641 BFSP2Q13515 415 aa16.12■□□□□ 0.17
PBX1-219ENST00000560641 CRTC3Q6UUV7 619 aa16.12■□□□□ 0.17
PBX1-219ENST00000560641 RETREG3Q86VR2 466 aa16.12■□□□□ 0.17
PBX1-219ENST00000560641 GALNT13Q8IUC8 556 aa16.12■□□□□ 0.17
PBX1-219ENST00000560641 OR6Q1Q8NGQ2 317 aa16.12■□□□□ 0.17
PBX1-219ENST00000560641 AURKBQ96GD4 344 aaPredicted RBP16.12■□□□□ 0.17
PBX1-219ENST00000560641 TRMOQ9BU70 441 aa16.12■□□□□ 0.17
PBX1-219ENST00000560641 TRIM54Q9BYV2 358 aa16.12■□□□□ 0.17
PBX1-219ENST00000560641 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.12■□□□□ 0.17
PBX1-219ENST00000560641 CCDC167Q9P0B6 97 aa16.12■□□□□ 0.17
PBX1-219ENST00000560641 XPR1Q9UBH6 696 aa16.12■□□□□ 0.17
PBX1-219ENST00000560641 TMEM233B4DJY2 109 aa16.12■□□□□ 0.17
PBX1-219ENST00000560641 SPATA31C2B4DYI2 1134 aa16.12■□□□□ 0.17
PBX1-219ENST00000560641 ARPC2O15144 300 aa16.12■□□□□ 0.17
PBX1-219ENST00000560641 CLIC3O95833 236 aa16.12■□□□□ 0.17
PBX1-219ENST00000560641 PCMT1P22061 227 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms