RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 C5orf22Q49AR2 442 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 PPM1LQ5SGD2 360 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 PPP1R15BQ5SWA1 713 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 TAPT1Q6NXT6 567 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 DOK6Q6PKX4 331 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 RPTNQ6XPR3 784 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 FAM183BPQ6ZVS7 135 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 PIGZQ86VD9 579 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 GAD1Q99259 594 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 FNDC11Q9BVV2 318 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 DNMT3LQ9UJW3 386 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 RFXANKO14593 260 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 SUV39H1O43463 412 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 FGF1P05230 155 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 GALNT3Q14435 633 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 NPNTQ6UXI9 565 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 VSIG10LQ86VR7 867 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 FAM81AQ8TBF8 368 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 SOCS4Q8WXH5 440 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 LENG1Q96BZ8 264 aaPredicted RBP13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 SEMA3CQ99985 751 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 ST3GAL5Q9UNP4 418 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 PTCH2Q9Y6C5 1203 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 DHFRP00374 187 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 MARSP56192 900 aaKnown RBP13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 FMO1Q01740 532 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 TEX47Q8TBZ9 253 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 HELQQ8TDG4 1101 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 TRAPPC12Q8WVT3 735 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 AHCYL2Q96HN2 611 aaKnown RBP13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 INPP4AQ96PE3 977 aaPredicted RBP13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 CDH19Q9H159 772 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 ZFP14Q9HCL3 533 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 SNX15Q9NRS6 342 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 ZNF446Q9NWS9 450 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 EFR3BQ9Y2G0 817 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 ZMPSTE24O75844 475 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 PCSK2P16519 638 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 RPL4P36578 427 aaKnown RBP13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 STARP49675 285 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 NOMO3P69849 1222 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 MIIPQ5JXC2 388 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 FBXO42Q6P3S6 717 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 AMIGO2Q86SJ2 522 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 COL26A1Q96A83 441 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 DNAJC1Q96KC8 554 aaKnown RBP13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 CPA4Q9UI42 421 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 VWA7Q9Y334 891 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 CYP3A7-CYP3A51PA0A087WV96 503 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 SLC22A3O75751 556 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 PSMD10O75832 226 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 NADKO95544 446 aaPredicted RBP13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 COL6A2P12110 1019 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 CYP3A7P24462 503 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 EPHA3P29320 983 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 OMPP47874 163 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 LSM3P62310 102 aaKnown RBP13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 CRADDP78560 199 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 RIPK1Q13546 671 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 ZACNQ401N2 412 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 RFTN2Q52LD8 501 aaPredicted RBP13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 AADACL2Q6P093 401 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 NANOGNBQ7Z5D8 188 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 CCDC185Q8N715 623 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 ZNF248Q8NDW4 579 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 LMAN2LQ9H0V9 348 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 MUC13Q9H3R2 512 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 RHOJQ9H4E5 214 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 SAMD4AQ9UPU9 718 aaKnown RBP13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 MADDQ8WXG6 1647 aa13.26□□□□□ -0.29
CSPG4P11-201ENST00000560634 FFAR3O14843 346 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 GPR42O15529 346 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 NRP2O60462 931 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 GCATO75600 419 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 ERCC2P18074 760 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 SLC7A2P52569 658 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 TGFB2P61812 414 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 METTL21CQ5VZV1 264 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 WSCD1Q658N2 575 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 PACS1Q6VY07 963 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 EFCAB3Q8N7B9 438 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 CXorf40AQ8TE69 158 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 MARK4Q96L34 752 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 TSPAN18Q96SJ8 248 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 ZDHHC6Q9H6R6 413 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 GMEB1Q9Y692 573 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 LRRIQ1Q96JM4 1722 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 TCRBV9S1A1TA0A576 114 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 TSPAN9O75954 239 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 FARP2O94887 1054 aaPredicted RBP13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 SLC6A2P23975 617 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 FAUP35544 74 aaKnown RBP13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 RTP1P59025 263 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 DLG4P78352 724 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 CDK18Q07002 472 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 PUDPQ08623 228 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 LPIN1Q14693 890 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 GPAT3Q53EU6 434 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 ATG14Q6ZNE5 492 aa13.25□□□□□ -0.29
CSPG4P11-201ENST00000560634 FAM92BQ6ZTR7 304 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms