RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 KLRF2D3W0D1 207 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 GTPBP1O00178 669 aaKnown RBP1.79□□□□□ -2.12
HIF1A-212ENST00000557538 SPRY3O43610 288 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 ACTN1P12814 892 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 KELP23276 732 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 PAX7P23759 505 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 MLH1P40692 756 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 RPS3AP61247 264 aaKnown RBP1.79□□□□□ -2.12
HIF1A-212ENST00000557538 CRYMQ14894 314 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 WDR78Q5VTH9 848 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 LCN10Q6JVE6 187 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 MIS18BP1Q6P0N0 1132 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 ATF7IPQ6VMQ6 1270 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 CCDC129Q6ZRS4 1044 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 B4GALNT4Q76KP1 1039 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 SLC46A3Q7Z3Q1 461 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 RNF144BQ7Z419 303 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 MAML2Q8IZL2 1156 aaPredicted RBP1.79□□□□□ -2.12
HIF1A-212ENST00000557538 STAMQ92783 540 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 INTS12Q96CB8 462 aaKnown RBP1.79□□□□□ -2.12
HIF1A-212ENST00000557538 IFT27Q9BW83 186 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 CXorf56Q9H5V9 222 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 VEZTQ9HBM0 779 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 PCDH9Q9HC56 1237 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 IL1RAPL1Q9NZN1 696 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 EHD2Q9NZN4 543 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 UTS2RQ9UKP6 389 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 PIAS3Q9Y6X2 628 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 RSF1Q96T23 1441 aaPredicted RBP1.79□□□□□ -2.12
HIF1A-212ENST00000557538 CXorf65A6NEN9 183 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 PROB1E7EW31 1015 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 MS4A18H0YCH9 400 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 UGDHO60701 494 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 TSPAN9O75954 239 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 MTA2O94776 668 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 HSP90AA1P07900 732 aaKnown RBP1.78□□□□□ -2.12
HIF1A-212ENST00000557538 CHRNB2P17787 502 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 CXCR3P49682 368 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 NANOS3P60323 173 aaKnown RBP1.78□□□□□ -2.12
HIF1A-212ENST00000557538 ARF3P61204 181 aaPredicted RBP1.78□□□□□ -2.12
HIF1A-212ENST00000557538 ARF1P84077 181 aaKnown RBP1.78□□□□□ -2.12
HIF1A-212ENST00000557538 C15orf59Q2T9L4 293 aaPredicted RBP1.78□□□□□ -2.12
HIF1A-212ENST00000557538 FBXO43Q4G163 708 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 ALG10Q5BKT4 473 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 ALG10BQ5I7T1 473 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 TMEM71Q6P5X7 295 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 CCBE1Q6UXH8 406 aaPredicted RBP1.78□□□□□ -2.12
HIF1A-212ENST00000557538 BEST2Q8NFU1 509 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 TMEM18Q96B42 140 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 PERPQ96FX8 193 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 URB1-AS1Q96HZ7 61 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 DECR2Q9NUI1 292 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 MTPAPQ9NVV4 582 aaKnown RBP eCLIP1.78□□□□□ -2.12
HIF1A-212ENST00000557538 IRAK4Q9NWZ3 460 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 MSRB1Q9NZV6 116 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 ZNF70Q9UC06 446 aaPredicted RBP1.78□□□□□ -2.12
HIF1A-212ENST00000557538 AGO1Q9UL18 857 aaKnown RBP1.78□□□□□ -2.12
HIF1A-212ENST00000557538 ODF2LQ9ULJ1 636 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 PCDHAC2Q9Y5I4 1007 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 HS3ST3B1Q9Y662 390 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 POLR2AP24928 1970 aaKnown RBP1.78□□□□□ -2.12
HIF1A-212ENST00000557538 IGHV4-28A0A0C4DH34 117 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 TEX13CA0A0J9YWL9 993 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 LDHCP07864 332 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 ARSBP15848 533 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 ACADLP28330 430 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 HOXC13P31276 330 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 ICAM3P32942 547 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 PTPN9P43378 593 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 ME1P48163 572 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 CLDN2P57739 230 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 RNASELQ05823 741 aaKnown RBP1.78□□□□□ -2.12
HIF1A-212ENST00000557538 Q0VFX4 171 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 CUL4AQ13619 759 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 AP5B1Q2VPB7 878 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 SLC4A8Q2Y0W8 1093 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 C6orf10Q5SRN2 563 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 RARS2Q5T160 578 aaKnown RBP1.78□□□□□ -2.12
HIF1A-212ENST00000557538 PXDC1Q5TGL8 231 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 CCDC30Q5VVM6 783 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 KRT79Q5XKE5 535 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 FAM205BPQ63HN1 556 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 TMEM154Q6P9G4 183 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 GLDNQ6ZMI3 551 aaPredicted RBP1.78□□□□□ -2.12
HIF1A-212ENST00000557538 VPS52Q8N1B4 723 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 TMEM116Q8NCL8 245 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 VOPP1Q96AW1 172 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 FAM120BQ96EK7 910 aaKnown RBP1.78□□□□□ -2.12
HIF1A-212ENST00000557538 KLHL15Q96M94 604 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 TMEM68Q96MH6 324 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 FIZ1Q96SL8 496 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 CCDC94Q9BW85 323 aaPredicted RBP1.78□□□□□ -2.12
HIF1A-212ENST00000557538 QTRT1Q9BXR0 403 aaKnown RBP1.78□□□□□ -2.12
HIF1A-212ENST00000557538 CDT1Q9H211 546 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 MVB12BQ9H7P6 319 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 FBRSL1Q9HCM7 1045 aaKnown RBP1.78□□□□□ -2.12
HIF1A-212ENST00000557538 WSB2Q9NYS7 404 aaPredicted RBP1.78□□□□□ -2.12
HIF1A-212ENST00000557538 PEMTQ9UBM1 199 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 HEY2Q9UBP5 337 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 MTMR6Q9Y217 621 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms