RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 LCMT1Q9UIC8 334 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 ACTL7AQ9Y615 435 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 CACNA1BQ00975 2339 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 CKAP5Q14008 2032 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 C10orf142B7Z368 130 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 PRAMEF11O60813 436 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 LRCH4O75427 683 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 IL2RAP01589 272 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 CKMT2P17540 419 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 ERCC2P18074 760 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 SERPINA4P29622 427 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 GKP32189 559 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 CLDN2P57739 230 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 NSUN2Q08J23 767 aaKnown RBP eCLIP7.41□□□□□ -1.22
SCFD1-222ENST00000556768 BNIP3Q12983 259 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 TRIM14Q14142 442 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 KRT81Q14533 505 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 ZFYVE27Q5T4F4 411 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 ARTNQ5T4W7 220 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 CCNI2Q6ZMN8 369 aaPredicted RBP7.41□□□□□ -1.22
SCFD1-222ENST00000556768 TMPRSS7Q7RTY8 843 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 ABI3BPQ7Z7G0 1075 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 TMPRSS12Q86WS5 348 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 SPATS2Q86XZ4 545 aaKnown RBP7.41□□□□□ -1.22
SCFD1-222ENST00000556768 MAP7D3Q8IWC1 876 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 DENND6BQ8NEG7 585 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 OR13H1Q8NG92 308 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 BTN2A2Q8WVV5 523 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 ASB12Q8WXK4 309 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 CTNNBL1Q8WYA6 563 aaPredicted RBP7.41□□□□□ -1.22
SCFD1-222ENST00000556768 ZCCHC14Q8WYQ9 949 aaKnown RBP7.41□□□□□ -1.22
SCFD1-222ENST00000556768 HSPH1Q92598 858 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 KCTD12Q96CX2 325 aaKnown RBP7.41□□□□□ -1.22
SCFD1-222ENST00000556768 CELF6Q96J87 481 aaKnown RBP7.41□□□□□ -1.22
SCFD1-222ENST00000556768 TUBGCP5Q96RT8 1024 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 SNRNP25Q9BV90 132 aaKnown RBP7.41□□□□□ -1.22
SCFD1-222ENST00000556768 ABCG4Q9H172 646 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 SUV39H2Q9H5I1 410 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 CCDC86Q9H6F5 360 aaKnown RBP7.41□□□□□ -1.22
SCFD1-222ENST00000556768 LRRC19Q9H756 370 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 GPATCH2LQ9NWQ4 482 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 NCKIPSDQ9NZQ3 722 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 ANAPC7Q9UJX3 599 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 ZFR2Q9UPR6 939 aaKnown RBP7.41□□□□□ -1.22
SCFD1-222ENST00000556768 NEU3Q9UQ49 428 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 HRH3Q9Y5N1 445 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 PLXND1Q9Y4D7 1925 aa7.4□□□□□ -1.22
SCFD1-222ENST00000556768 PCNX2A6NKB5 2137 aa7.4□□□□□ -1.22
SCFD1-222ENST00000556768 CELSR3Q9NYQ7 3312 aa7.4□□□□□ -1.22
SCFD1-222ENST00000556768 AKAP13Q12802 2813 aa7.4□□□□□ -1.22
SCFD1-222ENST00000556768 SPTY2D1-AS1A0A0U1RR47 76 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 A0A1W2PQ67 120 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 TLDC2A0PJX2 215 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 SERTM1A2A2V5 107 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 J3KR12 359 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 EIF1AYO14602 144 aaKnown RBP7.4□□□□□ -1.23
SCFD1-222ENST00000556768 TOR1BO14657 336 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 SDC3O75056 442 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 RFPL3O75679 317 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 KRT10P13645 584 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 DGKAP23743 735 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 HTR1BP28222 390 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 CASP14P31944 242 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 CSNK1DP48730 415 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 BLKP51451 505 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 DUSP3P51452 185 aaPredicted RBP7.4□□□□□ -1.23
SCFD1-222ENST00000556768 YPEL5P62699 121 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 E2F1Q01094 437 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 BCL2L1Q07817 233 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 IL10RBQ08334 325 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 PDE1CQ14123 709 aaPredicted RBP7.4□□□□□ -1.23
SCFD1-222ENST00000556768 UGP2Q16851 508 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 SMTNL2Q2TAL5 461 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 ODF2Q5BJF6 829 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 SPECC1LQ69YQ0 1117 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 DHRS13Q6UX07 377 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 KYAT3Q6YP21 454 aaKnown RBP7.4□□□□□ -1.23
SCFD1-222ENST00000556768 ZNF662Q6ZS27 426 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 PARGQ86W56 976 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 LRRC49Q8IUZ0 686 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 ALDH16A1Q8IZ83 802 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 OR8K1Q8NGG5 319 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 GATA6Q92908 595 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 EXOC2Q96KP1 924 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 ZNF599Q96NL3 588 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 NUP85Q9BW27 656 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 SLC13A1Q9BZW2 595 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 SLC39A8Q9C0K1 460 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 THAP2Q9H0W7 228 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 NOL6Q9H6R4 1146 aaKnown RBP7.4□□□□□ -1.23
SCFD1-222ENST00000556768 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.4□□□□□ -1.23
SCFD1-222ENST00000556768 CWC15Q9P013 229 aaKnown RBP7.4□□□□□ -1.23
SCFD1-222ENST00000556768 CTTNBP2NLQ9P2B4 639 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 CA5BQ9Y2D0 317 aa7.4□□□□□ -1.23
SCFD1-222ENST00000556768 TMA7Q9Y2S6 64 aaKnown RBP7.4□□□□□ -1.23
SCFD1-222ENST00000556768 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.39□□□□□ -1.23
SCFD1-222ENST00000556768 POM121BA6NF01 834 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 TMEM110-MUSTN1A8MSY1 372 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 AREL1O15033 823 aa7.39□□□□□ -1.23
SCFD1-222ENST00000556768 AKR1B10O60218 316 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms