RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 SF3B1O75533 1304 aaKnown RBP eCLIP15.1■□□□□ 0.011e-12■■■■■ 240.6
ARHGEF40-207ENST00000556399 A0A088AWK7 358 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 CBX4O00257 560 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 THPOP40225 353 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 SYTL3Q4VX76 610 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 PITRM1Q5JRX3 1037 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 EPGNQ6UW88 154 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 C15orf39Q6ZRI6 1047 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 HEATR4Q86WZ0 1026 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 PHF12Q96QT6 1004 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 ZFYVE28Q9HCC9 887 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 CIDEBQ9UHD4 219 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 RAD51BO15315 384 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 FGF3P11487 239 aaPredicted RBP15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 POLD2P49005 469 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 ZNF132P52740 706 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 PRKG2Q13237 762 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 TREML2Q5T2D2 321 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 DEPDC1Q5TB30 811 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 SLC9A4Q6AI14 798 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 DENND6AQ8IWF6 608 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 PKP2Q99959 881 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 PLK2Q9NYY3 685 aa15.1■□□□□ 0.01
ARHGEF40-207ENST00000556399 NAV1Q8NEY1 1877 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 DYTNA2CJ06 578 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 TTLL13PA6NNM8 815 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 C9JVG2 144 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 H3BSA7 217 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 ASNA1O43681 348 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 GLUD2P49448 558 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 IL2P60568 153 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 DDR2Q16832 855 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 HECTD2Q5U5R9 776 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 MFSD14CQ5VZR4 134 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 MAP1SQ66K74 1059 aaPredicted RBP15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 PAOXQ6QHF9 649 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 FAM35AQ86V20 835 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 TRIM69Q86WT6 500 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 PQLC3Q8N755 202 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 CDYL2Q8N8U2 506 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 KLHL23Q8NBE8 558 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 COLEC11Q9BWP8 271 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 TEX12Q9BXU0 123 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 NMRK2Q9NPI5 230 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 ATP6V1E1P36543 226 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 SP2Q02086 613 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 UBE3AQ05086 875 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 ESRP1Q6NXG1 681 aaKnown RBP15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 PLEKHH3Q7Z736 793 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 HEXDCQ8WVB3 486 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 BHMTQ93088 406 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 LPIN3Q9BQK8 851 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 PREBQ9HCU5 417 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 C3orf18Q9UK00 162 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 ZNF214Q9UL59 606 aaPredicted RBP15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 ABT1Q9ULW3 272 aaKnown RBP15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 HLA-DPA1P20036 260 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 PRIM2P49643 509 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 MFSD10Q14728 455 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 TRAF7Q6Q0C0 670 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 FAM124BQ9H5Z6 455 aaPredicted RBP15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 SMPD3Q9NY59 655 aaPredicted RBP15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 NPHS1O60500 1241 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 MLYCDO95822 493 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 KRT6AP02538 564 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 MT-ND1P03886 318 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 KRT6BP04259 564 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 RHOCP08134 193 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 ITGALP20701 1170 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 KRT6CP48668 564 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 OFCC1Q8IZS5 231 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 WDTC1Q8N5D0 677 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 ADI1Q9BV57 179 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 BCO2Q9BYV7 579 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 TLE6Q9H808 572 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 ADAMTS6Q9UKP5 1117 aa15.09■□□□□ 0.01
ARHGEF40-207ENST00000556399 TSPAN1O60635 241 aa15.08■□□□□ 0.01
ARHGEF40-207ENST00000556399 CNOT3O75175 753 aaKnown RBP15.08■□□□□ 0.01
ARHGEF40-207ENST00000556399 CST1P01037 141 aa15.08■□□□□ 0.01
ARHGEF40-207ENST00000556399 ASLP04424 464 aa15.08■□□□□ 0.01
ARHGEF40-207ENST00000556399 PIRTP0C851 137 aa15.08■□□□□ 0.01
ARHGEF40-207ENST00000556399 GM2AP17900 193 aa15.08■□□□□ 0.01
ARHGEF40-207ENST00000556399 MTTPP55157 894 aa15.08■□□□□ 0.01
ARHGEF40-207ENST00000556399 TNFAIP8L3Q5GJ75 292 aa15.08■□□□□ 0.01
ARHGEF40-207ENST00000556399 HS6ST3Q8IZP7 471 aa15.08■□□□□ 0.01
ARHGEF40-207ENST00000556399 OR8H2Q8N162 312 aa15.08■□□□□ 0.01
ARHGEF40-207ENST00000556399 NKAPQ8N5F7 415 aaKnown RBP15.08■□□□□ 0.01
ARHGEF40-207ENST00000556399 TOP6BLQ8N6T0 577 aa15.08■□□□□ 0.01
ARHGEF40-207ENST00000556399 DOLKQ9UPQ8 538 aa15.08■□□□□ 0.01
ARHGEF40-207ENST00000556399 PSAT1Q9Y617 370 aa15.08■□□□□ 0.01
ARHGEF40-207ENST00000556399 SLC22A3O75751 556 aa15.08■□□□□ 0
ARHGEF40-207ENST00000556399 OR6B1O95007 311 aa15.08■□□□□ 0
ARHGEF40-207ENST00000556399 CKMT2P17540 419 aa15.08■□□□□ 0
ARHGEF40-207ENST00000556399 ZNF252P-AS1Q0IIN9 211 aa15.08■□□□□ 0
ARHGEF40-207ENST00000556399 TRAF3Q13114 568 aa15.08■□□□□ 0
ARHGEF40-207ENST00000556399 HERC3Q15034 1050 aa15.08■□□□□ 0
ARHGEF40-207ENST00000556399 SOWAHAQ2M3V2 549 aa15.08■□□□□ 0
ARHGEF40-207ENST00000556399 GPR158Q5T848 1215 aa15.08■□□□□ 0
ARHGEF40-207ENST00000556399 RRM2BQ7LG56 351 aa15.08■□□□□ 0
ARHGEF40-207ENST00000556399 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms