RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 ZNF329Q86UD4 541 aa5.25□□□□□ -1.57
PRPF39-209ENST00000556353 ZBTB8BQ8NAP8 495 aaPredicted RBP5.25□□□□□ -1.57
PRPF39-209ENST00000556353 SETD9Q8NE22 299 aa5.25□□□□□ -1.57
PRPF39-209ENST00000556353 LINS1Q8NG48 757 aa5.25□□□□□ -1.57
PRPF39-209ENST00000556353 LILRB1Q8NHL6 650 aaPredicted RBP5.25□□□□□ -1.57
PRPF39-209ENST00000556353 RASSF8Q8NHQ8 419 aa5.25□□□□□ -1.57
PRPF39-209ENST00000556353 RBM17Q96I25 401 aaKnown RBP5.25□□□□□ -1.57
PRPF39-209ENST00000556353 MSTO1Q9BUK6 570 aa5.25□□□□□ -1.57
PRPF39-209ENST00000556353 NPLQ9BXD5 320 aaPredicted RBP5.25□□□□□ -1.57
PRPF39-209ENST00000556353 CTDSP1Q9GZU7 261 aa5.25□□□□□ -1.57
PRPF39-209ENST00000556353 MVB12BQ9H7P6 319 aa5.25□□□□□ -1.57
PRPF39-209ENST00000556353 CHODLQ9H9P2 273 aa5.25□□□□□ -1.57
PRPF39-209ENST00000556353 CLK4Q9HAZ1 481 aaKnown RBP5.25□□□□□ -1.57
PRPF39-209ENST00000556353 ATP8A2Q9NTI2 1148 aa5.25□□□□□ -1.57
PRPF39-209ENST00000556353 TMEM51Q9NW97 253 aa5.25□□□□□ -1.57
PRPF39-209ENST00000556353 CLDN16Q9Y5I7 305 aa5.25□□□□□ -1.57
PRPF39-209ENST00000556353 MORC2Q9Y6X9 1032 aaPredicted RBP5.25□□□□□ -1.57
PRPF39-209ENST00000556353 NUP155O75694 1391 aa5.25□□□□□ -1.57
PRPF39-209ENST00000556353 ABCA3Q99758 1704 aa5.25□□□□□ -1.57
PRPF39-209ENST00000556353 A0A087WYN8 130 aa5.24□□□□□ -1.57
PRPF39-209ENST00000556353 DYTNA2CJ06 578 aa5.24□□□□□ -1.57
PRPF39-209ENST00000556353 RPL3P39023 403 aaKnown RBP5.24□□□□□ -1.57
PRPF39-209ENST00000556353 POU5F1BQ06416 359 aa5.24□□□□□ -1.57
PRPF39-209ENST00000556353 ST3GAL1Q11201 340 aa5.24□□□□□ -1.57
PRPF39-209ENST00000556353 CHAF1AQ13111 956 aaPredicted RBP5.24□□□□□ -1.57
PRPF39-209ENST00000556353 UBE4AQ14139 1066 aa5.24□□□□□ -1.57
PRPF39-209ENST00000556353 ME3Q16798 604 aa5.24□□□□□ -1.57
PRPF39-209ENST00000556353 DCAF6Q58WW2 860 aa5.24□□□□□ -1.57
PRPF39-209ENST00000556353 RETSATQ6NUM9 610 aa5.24□□□□□ -1.57
PRPF39-209ENST00000556353 GJB7Q6PEY0 223 aa5.24□□□□□ -1.57
PRPF39-209ENST00000556353 GHDCQ8N2G8 530 aa5.24□□□□□ -1.57
PRPF39-209ENST00000556353 THAP4Q8WY91 577 aa5.24□□□□□ -1.57
PRPF39-209ENST00000556353 ADGRG7Q96K78 797 aa5.24□□□□□ -1.57
PRPF39-209ENST00000556353 PAGR1Q9BTK6 254 aa5.24□□□□□ -1.57
PRPF39-209ENST00000556353 TWSG1Q9GZX9 223 aa5.24□□□□□ -1.57
PRPF39-209ENST00000556353 TLR8Q9NR97 1041 aaKnown RBP5.24□□□□□ -1.57
PRPF39-209ENST00000556353 METP08581 1390 aa5.24□□□□□ -1.57
PRPF39-209ENST00000556353 MSH6P52701 1360 aa5.24□□□□□ -1.57
PRPF39-209ENST00000556353 HFM1A2PYH4 1435 aa5.23□□□□□ -1.57
PRPF39-209ENST00000556353 PRAG1Q86YV5 1406 aa5.23□□□□□ -1.57
PRPF39-209ENST00000556353 COL22A1Q8NFW1 1626 aaPredicted RBP5.23□□□□□ -1.57
PRPF39-209ENST00000556353 IGLV5-37A0A075B6J1 123 aa5.23□□□□□ -1.57
PRPF39-209ENST00000556353 A0A0U1RQJ8 604 aa5.23□□□□□ -1.57
PRPF39-209ENST00000556353 GRID2O43424 1007 aa5.23□□□□□ -1.57
PRPF39-209ENST00000556353 BUB3O43684 328 aa5.23□□□□□ -1.57
PRPF39-209ENST00000556353 FAM155BO75949 473 aa5.23□□□□□ -1.57
PRPF39-209ENST00000556353 KRT36O76013 467 aa5.23□□□□□ -1.57
PRPF39-209ENST00000556353 SERPINC1P01008 464 aa5.23□□□□□ -1.57
PRPF39-209ENST00000556353 MYF6P23409 242 aa5.23□□□□□ -1.57
PRPF39-209ENST00000556353 PEX5P50542 639 aa5.23□□□□□ -1.57
PRPF39-209ENST00000556353 FAM27E3Q08E93 113 aa5.23□□□□□ -1.57
PRPF39-209ENST00000556353 LPIN1Q14693 890 aa5.23□□□□□ -1.57
PRPF39-209ENST00000556353 SF3B4Q15427 424 aaKnown RBP eCLIP5.23□□□□□ -1.572e-6■■□□□ 11.7
PRPF39-209ENST00000556353 SH2D4BQ5SQS7 431 aa5.23□□□□□ -1.57
PRPF39-209ENST00000556353 FAM83BQ5T0W9 1011 aa5.23□□□□□ -1.57
PRPF39-209ENST00000556353 NEK10Q6ZWH5 1172 aa5.23□□□□□ -1.57
PRPF39-209ENST00000556353 SPICE1Q8N0Z3 855 aa5.23□□□□□ -1.57
PRPF39-209ENST00000556353 MCPH1Q8NEM0 835 aa5.23□□□□□ -1.57
PRPF39-209ENST00000556353 MASTLQ96GX5 879 aa5.23□□□□□ -1.57
PRPF39-209ENST00000556353 HDAC6Q9UBN7 1215 aa5.23□□□□□ -1.57
PRPF39-209ENST00000556353 PAM16Q9Y3D7 125 aa5.23□□□□□ -1.57
PRPF39-209ENST00000556353 PIK3R4Q99570 1358 aa5.23□□□□□ -1.57
PRPF39-209ENST00000556353 FMN2Q9NZ56 1722 aa5.23□□□□□ -1.57
PRPF39-209ENST00000556353 DCCP43146 1447 aa5.23□□□□□ -1.57
PRPF39-209ENST00000556353 ADGRL3Q9HAR2 1447 aa5.23□□□□□ -1.57
PRPF39-209ENST00000556353 NCOA3Q9Y6Q9 1424 aa5.23□□□□□ -1.57
PRPF39-209ENST00000556353 CDC42BPGQ6DT37 1551 aa5.22□□□□□ -1.57
PRPF39-209ENST00000556353 CH25HO95992 272 aa5.22□□□□□ -1.57
PRPF39-209ENST00000556353 DHRS4L1P0CG22 281 aa5.22□□□□□ -1.57
PRPF39-209ENST00000556353 CTPS1P17812 591 aa5.22□□□□□ -1.57
PRPF39-209ENST00000556353 ADD2P35612 726 aa5.22□□□□□ -1.57
PRPF39-209ENST00000556353 DLX5P56178 289 aa5.22□□□□□ -1.57
PRPF39-209ENST00000556353 CYP4A11Q02928 519 aa5.22□□□□□ -1.57
PRPF39-209ENST00000556353 MYBPHQ13203 477 aa5.22□□□□□ -1.57
PRPF39-209ENST00000556353 SNTA1Q13424 505 aa5.22□□□□□ -1.57
PRPF39-209ENST00000556353 CAPSQ13938 189 aa5.22□□□□□ -1.57
PRPF39-209ENST00000556353 MORC3Q14149 939 aa5.22□□□□□ -1.57
PRPF39-209ENST00000556353 KRTAP27-1Q3LI81 207 aa5.22□□□□□ -1.57
PRPF39-209ENST00000556353 CBWD5Q5RIA9 395 aa5.22□□□□□ -1.57
PRPF39-209ENST00000556353 KRTAP5-11Q6L8G4 156 aa5.22□□□□□ -1.57
PRPF39-209ENST00000556353 CCDC174Q6PII3 467 aa5.22□□□□□ -1.57
PRPF39-209ENST00000556353 GSG1LQ6UXU4 331 aa5.22□□□□□ -1.57
PRPF39-209ENST00000556353 RFLNBQ8N5W9 214 aa5.22□□□□□ -1.57
PRPF39-209ENST00000556353 ANKRD44Q8N8A2 993 aa5.22□□□□□ -1.57
PRPF39-209ENST00000556353 ZMIZ2Q8NF64 920 aa5.22□□□□□ -1.57
PRPF39-209ENST00000556353 RNF183Q96D59 192 aa5.22□□□□□ -1.57
PRPF39-209ENST00000556353 INPP4AQ96PE3 977 aaPredicted RBP5.22□□□□□ -1.57
PRPF39-209ENST00000556353 CHMP4AQ9BY43 222 aa5.22□□□□□ -1.57
PRPF39-209ENST00000556353 ENTPD7Q9NQZ7 604 aa5.22□□□□□ -1.57
PRPF39-209ENST00000556353 KIF17Q9P2E2 1029 aa5.22□□□□□ -1.57
PRPF39-209ENST00000556353 TAGLN3Q9UI15 199 aa5.22□□□□□ -1.57
PRPF39-209ENST00000556353 CD207Q9UJ71 328 aa5.22□□□□□ -1.57
PRPF39-209ENST00000556353 CNPY2Q9Y2B0 182 aa5.22□□□□□ -1.57
PRPF39-209ENST00000556353 DERAQ9Y315 318 aa5.22□□□□□ -1.57
PRPF39-209ENST00000556353 UTRNP46939 3433 aa5.22□□□□□ -1.57
PRPF39-209ENST00000556353 BRWD3Q6RI45 1802 aa5.22□□□□□ -1.57
PRPF39-209ENST00000556353 PTCH1Q13635 1447 aa5.22□□□□□ -1.57
PRPF39-209ENST00000556353 JCADQ9P266 1359 aa5.21□□□□□ -1.58
PRPF39-209ENST00000556353 TIMM23O14925 209 aa5.21□□□□□ -1.58
PRPF39-209ENST00000556353 SLC25A17O43808 307 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms