RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 ANKRD40Q6AI12 368 aa5.94□□□□□ -1.46
PRKCH-220ENST00000556164 DENND1BQ6P3S1 775 aa5.94□□□□□ -1.46
PRKCH-220ENST00000556164 C22orf39Q6P5X5 142 aa5.94□□□□□ -1.46
PRKCH-220ENST00000556164 LINGO4Q6UY18 593 aa5.94□□□□□ -1.46
PRKCH-220ENST00000556164 KYAT3Q6YP21 454 aaKnown RBP5.94□□□□□ -1.46
PRKCH-220ENST00000556164 ERN2Q76MJ5 926 aaKnown RBP5.94□□□□□ -1.46
PRKCH-220ENST00000556164 BEND5Q7L4P6 421 aa5.94□□□□□ -1.46
PRKCH-220ENST00000556164 PARGQ86W56 976 aa5.94□□□□□ -1.46
PRKCH-220ENST00000556164 ZNF354CQ86Y25 554 aa5.94□□□□□ -1.46
PRKCH-220ENST00000556164 DCP2Q8IU60 420 aaKnown RBP5.94□□□□□ -1.46
PRKCH-220ENST00000556164 ARHGEF19Q8IW93 802 aa5.94□□□□□ -1.46
PRKCH-220ENST00000556164 HSCBQ8IWL3 235 aa5.94□□□□□ -1.46
PRKCH-220ENST00000556164 ARL14Q8N4G2 192 aa5.94□□□□□ -1.46
PRKCH-220ENST00000556164 CHST14Q8NCH0 376 aa5.94□□□□□ -1.46
PRKCH-220ENST00000556164 TMIEQ8NEW7 156 aa5.94□□□□□ -1.46
PRKCH-220ENST00000556164 PPHLN1Q8NEY8 458 aaKnown RBP5.94□□□□□ -1.46
PRKCH-220ENST00000556164 WDR36Q8NI36 951 aaKnown RBP5.94□□□□□ -1.46
PRKCH-220ENST00000556164 LMX1AQ8TE12 382 aa5.94□□□□□ -1.46
PRKCH-220ENST00000556164 WNT2BQ93097 391 aa5.94□□□□□ -1.46
PRKCH-220ENST00000556164 MARVELD3Q96A59 401 aa5.94□□□□□ -1.46
PRKCH-220ENST00000556164 GRAMD1AQ96CP6 724 aa5.94□□□□□ -1.46
PRKCH-220ENST00000556164 ALG14Q96F25 216 aa5.94□□□□□ -1.46
PRKCH-220ENST00000556164 PRR11Q96HE9 360 aaPredicted RBP5.94□□□□□ -1.46
PRKCH-220ENST00000556164 CCDC34Q96HJ3 373 aa5.94□□□□□ -1.46
PRKCH-220ENST00000556164 PPP1R16AQ96I34 528 aa5.94□□□□□ -1.46
PRKCH-220ENST00000556164 MED15Q96RN5 788 aa5.94□□□□□ -1.46
PRKCH-220ENST00000556164 SLC17A9Q9BYT1 436 aa5.94□□□□□ -1.46
PRKCH-220ENST00000556164 BHLHE41Q9C0J9 482 aaPredicted RBP5.94□□□□□ -1.46
PRKCH-220ENST00000556164 GOLPH3LQ9H4A5 285 aa5.94□□□□□ -1.46
PRKCH-220ENST00000556164 THAP9Q9H5L6 903 aa5.94□□□□□ -1.46
PRKCH-220ENST00000556164 IFT22Q9H7X7 185 aa5.94□□□□□ -1.46
PRKCH-220ENST00000556164 RMND1Q9NWS8 449 aa5.94□□□□□ -1.46
PRKCH-220ENST00000556164 NCKIPSDQ9NZQ3 722 aa5.94□□□□□ -1.46
PRKCH-220ENST00000556164 IL36AQ9UHA7 158 aa5.94□□□□□ -1.46
PRKCH-220ENST00000556164 IPO11Q9UI26 975 aaKnown RBP5.94□□□□□ -1.46
PRKCH-220ENST00000556164 HS3ST2Q9Y278 367 aa5.94□□□□□ -1.46
PRKCH-220ENST00000556164 LUC7L2Q9Y383 392 aaKnown RBP5.94□□□□□ -1.46
PRKCH-220ENST00000556164 PCDHGA8Q9Y5G5 932 aa5.94□□□□□ -1.46
PRKCH-220ENST00000556164 ANKRD36A6QL64 1941 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 PIEZO2Q9H5I5 2752 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 CCDC187A0A096LP49 1063 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 SPTY2D1-AS1A0A0U1RR47 76 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 FAM237AA0A1B0GTK4 181 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 EME2A4GXA9 379 aaPredicted RBP5.93□□□□□ -1.46
PRKCH-220ENST00000556164 RNF103O00237 685 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 RAD51BO15315 384 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 AQP9O43315 295 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 THAP12O43422 761 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 MED7O43513 233 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 SMAD6O43541 496 aaKnown RBP5.93□□□□□ -1.46
PRKCH-220ENST00000556164 CLDN11O75508 207 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 LEFTY1O75610 366 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 GRAP2O75791 330 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 CNTN5O94779 1100 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 ENDOD1O94919 500 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 LETM1O95202 739 aaPredicted RBP5.93□□□□□ -1.46
PRKCH-220ENST00000556164 ADCY5O95622 1261 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 PAK4O96013 591 aaPredicted RBP5.93□□□□□ -1.46
PRKCH-220ENST00000556164 RHOCP08134 193 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 NAT2P11245 290 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 RABIFP47224 123 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 RPIAP49247 311 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 CDH4P55283 916 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 RPS21P63220 83 aaKnown RBP5.93□□□□□ -1.46
PRKCH-220ENST00000556164 GCNT1Q02742 428 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 LRRC63Q05C16 580 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 TYRO3Q06418 890 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 PDE1CQ14123 709 aaPredicted RBP5.93□□□□□ -1.46
PRKCH-220ENST00000556164 SPIDRQ14159 915 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 FGL2Q14314 439 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 ARL13BQ3SXY8 428 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 CCDC40Q4G0X9 1142 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 FAM209AQ5JX71 171 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 ZNF658Q5TYW1 1059 aaPredicted RBP5.93□□□□□ -1.46
PRKCH-220ENST00000556164 KIAA1161Q6NSJ0 714 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 CLEC14AQ86T13 490 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 DEFB106AQ8N104 65 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 CNPY4Q8N129 248 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 CCDC89Q8N998 374 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 OR2A12Q8NGT7 310 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 SNX21Q969T3 373 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 BMFQ96LC9 184 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 KREMEN1Q96MU8 473 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 CCNL2Q96S94 520 aaPredicted RBP5.93□□□□□ -1.46
PRKCH-220ENST00000556164 PSMB7Q99436 277 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 IL12RB2Q99665 862 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 HDAC8Q9BY41 377 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 GRIP2Q9C0E4 1043 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 SIK2Q9H0K1 926 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 TRIM39Q9HCM9 518 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 GPR27Q9NS67 375 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 IL17BQ9UHF5 180 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 VPS51Q9UID3 782 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 ATXN7L1Q9ULK2 861 aaPredicted RBP5.93□□□□□ -1.46
PRKCH-220ENST00000556164 POLR3KQ9Y2Y1 108 aaPredicted RBP5.93□□□□□ -1.46
PRKCH-220ENST00000556164 OR51B4Q9Y5P0 310 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 HS3ST4Q9Y661 456 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 HS3ST3A1Q9Y663 406 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 CSNK1G3Q9Y6M4 447 aa5.93□□□□□ -1.46
PRKCH-220ENST00000556164 SPTA1P02549 2419 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms