RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 KIDINS220Q9ULH0 1771 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 MOXD2PA6NHM9 499 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 NR2F6P10588 404 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 CTNNB1P35222 781 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 IL12RB1P42701 662 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 TRAP1Q12931 704 aaKnown RBP10.78□□□□□ -0.68
ACTN1-216ENST00000556083 RFTN1Q14699 578 aaPredicted RBP10.78□□□□□ -0.68
ACTN1-216ENST00000556083 PLEKHA7Q6IQ23 1121 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 ABRAXAS1Q6UWZ7 409 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 ADGRA1Q86SQ6 560 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 TTC7BQ86TV6 843 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 OR4L1Q8NH43 312 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 KAT2BQ92831 832 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 ACE2Q9BYF1 805 aaPredicted RBP10.78□□□□□ -0.68
ACTN1-216ENST00000556083 MAGEH1Q9H213 219 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 CAPN10Q9HC96 672 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 FAM198AQ9UFP1 575 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 IRAK3Q9Y616 596 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 AZIN1O14977 448 aa10.77□□□□□ -0.68
ACTN1-216ENST00000556083 PMM2O15305 246 aa10.77□□□□□ -0.68
ACTN1-216ENST00000556083 OR10H2O60403 315 aa10.77□□□□□ -0.68
ACTN1-216ENST00000556083 MPZL2O60487 215 aa10.77□□□□□ -0.68
ACTN1-216ENST00000556083 TSPAN3O60637 253 aa10.77□□□□□ -0.68
ACTN1-216ENST00000556083 DUSP11O75319 330 aaKnown RBP10.77□□□□□ -0.68
ACTN1-216ENST00000556083 EOMESO95936 686 aa10.77□□□□□ -0.68
ACTN1-216ENST00000556083 MLH1P40692 756 aa10.77□□□□□ -0.68
ACTN1-216ENST00000556083 NR1H2P55055 460 aa10.77□□□□□ -0.68
ACTN1-216ENST00000556083 CNTN2Q02246 1040 aa10.77□□□□□ -0.68
ACTN1-216ENST00000556083 MAP1SQ66K74 1059 aaPredicted RBP10.77□□□□□ -0.68
ACTN1-216ENST00000556083 RAET1GQ6H3X3 334 aa10.77□□□□□ -0.68
ACTN1-216ENST00000556083 HASPINQ8TF76 798 aa10.77□□□□□ -0.68
ACTN1-216ENST00000556083 SEMA3CQ99985 751 aa10.77□□□□□ -0.68
ACTN1-216ENST00000556083 GLIS2Q9BZE0 524 aaPredicted RBP10.77□□□□□ -0.68
ACTN1-216ENST00000556083 THUMPD1Q9NXG2 353 aaKnown RBP10.77□□□□□ -0.68
ACTN1-216ENST00000556083 COLEC10Q9Y6Z7 277 aa10.77□□□□□ -0.68
ACTN1-216ENST00000556083 A0A0B4J269 797 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 ANKRD63C9JTQ0 380 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 PLK4O00444 970 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 MDM4O15151 490 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 SLC22A2O15244 555 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 CYP7B1O75881 506 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 CCDC166P0CW27 439 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 SELPP16109 830 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 FAUP35544 74 aaKnown RBP10.77□□□□□ -0.69
ACTN1-216ENST00000556083 SMAD3P84022 425 aaKnown RBP10.77□□□□□ -0.69
ACTN1-216ENST00000556083 PTSQ03393 145 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 PPP3CAQ08209 521 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 ZC3H12AQ5D1E8 599 aaKnown RBP10.77□□□□□ -0.69
ACTN1-216ENST00000556083 TSHZ1Q6ZSZ6 1077 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 FAM183BPQ6ZVS7 135 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 C17orf64Q86WR6 236 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 SMYD1Q8NB12 490 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 FUBP3Q96I24 572 aaKnown RBP eCLIP10.77□□□□□ -0.69
ACTN1-216ENST00000556083 NUAK2Q9H093 628 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 RRAGCQ9HB90 399 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 DDX4Q9NQI0 724 aaKnown RBP10.77□□□□□ -0.69
ACTN1-216ENST00000556083 FETUBQ9UGM5 382 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 ZNF180Q9UJW8 692 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 H0YC42 278 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 WFS1O76024 890 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 OR6B1O95007 311 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 TFEBP19484 476 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 CCNCP24863 283 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 ACADLP28330 430 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 PKNOX1P55347 436 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 PTPRNQ16849 979 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 UNC5AQ6ZN44 842 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 GPR135Q8IZ08 494 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 BRSK1Q8TDC3 778 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 STYXQ8WUJ0 223 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 RNPEPQ9H4A4 650 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 PRDM12Q9H4Q4 367 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 GMIPQ9P107 970 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 VWA7Q9Y334 891 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 OR10H1Q9Y4A9 318 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 PCDHA2Q9Y5H9 948 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 TIMM13Q9Y5L4 95 aaPredicted RBP10.77□□□□□ -0.69
ACTN1-216ENST00000556083 HEBP2Q9Y5Z4 205 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 ASTN1O14525 1302 aa10.77□□□□□ -0.69
ACTN1-216ENST00000556083 TLR5O60602 858 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 ATP9AO75110 1047 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 ENDOD1O94919 500 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 PSMB4P28070 264 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 CD86P42081 329 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 CACNA2D1P54289 1103 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 CSNK2BP67870 215 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 RPP38P78345 283 aaKnown RBP10.76□□□□□ -0.69
ACTN1-216ENST00000556083 MRPS22P82650 360 aaKnown RBP10.76□□□□□ -0.69
ACTN1-216ENST00000556083 DPYSQ14117 519 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 CRY2Q49AN0 593 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 SLC4A11Q8NBS3 891 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 ZNF671Q8TAW3 534 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 SEPHS2Q99611 448 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 PNPLA8Q9NP80 782 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 ZNF214Q9UL59 606 aaPredicted RBP10.76□□□□□ -0.69
ACTN1-216ENST00000556083 COQ6Q9Y2Z9 468 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 F8VP50 259 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 CHST10O43529 356 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 DCXO43602 365 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 SNX3O60493 162 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms