RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 MT-CYBP00156 380 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-235ENST00000556082 MMP2P08253 660 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 HMBSP08397 361 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 LINC00271P0C7V0 271 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 TPH1P17752 444 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 PAMP19021 973 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 NMBRP28336 390 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 ARCN1P48444 511 aaKnown RBP8.38□□□□□ -1.07
ATXN3-235ENST00000556082 IDH3AP50213 366 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 SERPINH1P50454 418 aaKnown RBP8.38□□□□□ -1.07
ATXN3-235ENST00000556082 TWF1Q12792 350 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 BMPR2Q13873 1038 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 PDE1CQ14123 709 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-235ENST00000556082 GALNTL6Q49A17 601 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 SPDYAQ5MJ70 313 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 ATG16L1Q676U5 607 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 KIAA0930Q6ICG6 404 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-235ENST00000556082 CGB2Q6NT52 195 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 LILRA6Q6PI73 481 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 CES3Q6UWW8 571 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 CDHR3Q6ZTQ4 885 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 KIAA0408Q6ZU52 694 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 C16orf59Q7L2K0 433 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 TRPM8Q7Z2W7 1104 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 STRA8Q7Z7C7 330 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 GALNT7Q86SF2 657 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 KCNMB4Q86W47 210 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 DENND1CQ8IV53 801 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 FAM217AQ8IXS0 508 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 LMNTD2Q8IXW0 634 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 BBS5Q8N3I7 341 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 DNAJC5GQ8N7S2 189 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 PPHLN1Q8NEY8 458 aaKnown RBP8.38□□□□□ -1.07
ATXN3-235ENST00000556082 MFSD3Q96ES6 412 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 MYEOVQ96EZ4 313 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 FEM1CQ96JP0 617 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 FAM111AQ96PZ2 611 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 PSKH2Q96QS6 385 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 YME1L1Q96TA2 773 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 APOL2Q9BQE5 337 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 FICDQ9BVA6 458 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 FSD1LQ9BXM9 530 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 ACE2Q9BYF1 805 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-235ENST00000556082 POLR1EQ9GZS1 481 aaKnown RBP8.38□□□□□ -1.07
ATXN3-235ENST00000556082 RNF38Q9H0F5 515 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 ZBP1Q9H171 429 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 C20orf96Q9NUD7 363 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-235ENST00000556082 PIH1D1Q9NWS0 290 aaKnown RBP8.38□□□□□ -1.07
ATXN3-235ENST00000556082 SEPT3Q9UH03 358 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 AGO1Q9UL18 857 aaKnown RBP8.38□□□□□ -1.07
ATXN3-235ENST00000556082 LZTS1Q9Y250 596 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 IRAK3Q9Y616 596 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 PSAT1Q9Y617 370 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 ZFP37Q9Y6Q3 630 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-235ENST00000556082 GREB1Q4ZG55 1949 aa8.38□□□□□ -1.07
ATXN3-235ENST00000556082 DNAH12Q6ZR08 3092 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-235ENST00000556082 CXorf51AA0A1B0GTR3 108 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 A0A1B0GVM2 712 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 HEATR9A2RTY3 570 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 TCAF2A6NFQ2 919 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 MROH6A6NGR9 719 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 MYO1CO00159 1063 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 TPP1O14773 563 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 GREM1O60565 184 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 FGF18O76093 207 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 GSRP00390 522 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 FGBP02675 491 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 BPGMP07738 259 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 HSPA8P11142 646 aaKnown RBP8.37□□□□□ -1.07
ATXN3-235ENST00000556082 COL6A2P12110 1019 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 HLA-DPA1P20036 260 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 PSMA3P25788 255 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 HOXD9P28356 352 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-235ENST00000556082 TYK2P29597 1187 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 ALDH3A1P30838 453 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 CORO1AP31146 461 aaKnown RBP8.37□□□□□ -1.07
ATXN3-235ENST00000556082 ACVRL1P37023 503 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 CD86P42081 329 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 MAGEA9P43362 315 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 SERPINB8P50452 374 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 PDE1BQ01064 536 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 ACTN3Q08043 901 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-235ENST00000556082 ZNF177Q13360 481 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-235ENST00000556082 PPIGQ13427 754 aaKnown RBP eCLIP8.37□□□□□ -1.07
ATXN3-235ENST00000556082 HSP90AA5PQ58FG0 334 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 FSTL4Q6MZW2 842 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 CCDC149Q6ZUS6 474 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 OTOAQ7RTW8 1153 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 UBE2Q1Q7Z7E8 422 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 PGBD5Q8N414 524 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 FIBCD1Q8N539 461 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 GABPB2Q8TAK5 448 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-235ENST00000556082 PHOSPHO2Q8TCD6 241 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 PABPC5Q96DU9 382 aaKnown RBP8.37□□□□□ -1.07
ATXN3-235ENST00000556082 C7orf26Q96N11 449 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 GPR22Q99680 433 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 MGME1Q9BQP7 344 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 FAM167BQ9BTA0 163 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 LRRC3Q9BY71 257 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms