RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 SHISA5Q8N114 240 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 TMIEQ8NEW7 156 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 OR2A12Q8NGT7 310 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 WDR36Q8NI36 951 aaKnown RBP7.43□□□□□ -1.22
ATXN3-219ENST00000553488 CCNL2Q96S94 520 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-219ENST00000553488 KLF6Q99612 283 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-219ENST00000553488 BOCQ9BWV1 1114 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 ABCG4Q9H172 646 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 CRIM1Q9NZV1 1036 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 ACSL6Q9UKU0 697 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 PNMA8BQ9ULN7 279 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-219ENST00000553488 CSNK1G3Q9Y6M4 447 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 TEP1Q99973 2627 aaKnown RBP7.43□□□□□ -1.22
ATXN3-219ENST00000553488 CCDC187A0A096LP49 1063 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 CPED1A4D0V7 1026 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 E5RJQ4 531 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 K7ERQ8 282 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 KPNA3O00505 521 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-219ENST00000553488 NTN3O00634 580 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-219ENST00000553488 TPP1O14773 563 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 CETN3O15182 167 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 PMM2O15305 246 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 AQP9O43315 295 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 SUV39H1O43463 412 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 SMAD6O43541 496 aaKnown RBP7.42□□□□□ -1.22
ATXN3-219ENST00000553488 NOBOXO60393 691 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 SNAP91O60641 907 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 ZNF821O75541 412 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-219ENST00000553488 TNFSF15O95150 251 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 F13BP05160 661 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 BMP6P22004 513 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 CHRNA3P32297 505 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 NDUFA8P51970 172 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 PMS1P54277 932 aaKnown RBP7.42□□□□□ -1.22
ATXN3-219ENST00000553488 OXCT1P55809 520 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 EIF2B5Q13144 721 aaKnown RBP7.42□□□□□ -1.22
ATXN3-219ENST00000553488 MEA1Q16626 185 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 DEFB133Q30KQ1 61 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 ACCSLQ4AC99 568 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 OTUD1Q5VV17 481 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-219ENST00000553488 ATL3Q6DD88 541 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 C22orf39Q6P5X5 142 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 ERN2Q76MJ5 926 aaKnown RBP7.42□□□□□ -1.22
ATXN3-219ENST00000553488 B3GNT8Q7Z7M8 397 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 DCP2Q8IU60 420 aaKnown RBP7.42□□□□□ -1.22
ATXN3-219ENST00000553488 RBFAQ8N0V3 343 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 ARL14Q8N4G2 192 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 ATP6V0D2Q8N8Y2 350 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 CHST14Q8NCH0 376 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 LMO3Q8TAP4 145 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 LIN37Q96GY3 246 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-219ENST00000553488 SLC2A13Q96QE2 648 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 TRIM62Q9BVG3 475 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 HDAC8Q9BY41 377 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 TCEAL2Q9H3H9 227 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-219ENST00000553488 SEMA6CQ9H3T2 930 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 C12orf49Q9H741 205 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 POPDC2Q9HBU9 364 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 NCKIPSDQ9NZQ3 722 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 GPN3Q9UHW5 284 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-219ENST00000553488 VPS51Q9UID3 782 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 VPS28Q9UK41 221 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 TBC1D30Q9Y2I9 924 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 PCDHB4Q9Y5E5 795 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 PCDHGA7Q9Y5G6 932 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 HEMK1Q9Y5R4 338 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-219ENST00000553488 HS3ST3A1Q9Y663 406 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 CRYBG3Q68DQ2 2970 aa7.42□□□□□ -1.22
ATXN3-219ENST00000553488 RP1L1Q8IWN7 2480 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-219ENST00000553488 PRRC2CQ9Y520 2896 aaKnown RBP7.41□□□□□ -1.22
ATXN3-219ENST00000553488 I6L893 689 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-219ENST00000553488 MUSKO15146 869 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 GCATO75600 419 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 CNTN5O94779 1100 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 PCDH8O95206 1070 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 PRNPP04156 253 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 ADRB3P13945 408 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 ZNF18P17022 549 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 NME2P22392 152 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 RRM1P23921 792 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 ARNTP27540 789 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 SLC5A2P31639 672 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 ADMP35318 185 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 SYKP43405 635 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 ACADSBP45954 432 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 RABIFP47224 123 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 FMO5P49326 533 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 NEK3P51956 506 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 PFN3P60673 137 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 YWHAZP63104 245 aaKnown RBP7.41□□□□□ -1.22
ATXN3-219ENST00000553488 GCNT1Q02742 428 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 AUHQ13825 339 aaKnown RBP7.41□□□□□ -1.22
ATXN3-219ENST00000553488 PDE1CQ14123 709 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-219ENST00000553488 NR0B2Q15466 257 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 TAF5Q15542 800 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 TGIF1Q15583 401 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 COBLL1Q53SF7 1204 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 KIAA1161Q6NSJ0 714 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 DENND1BQ6P3S1 775 aa7.41□□□□□ -1.22
ATXN3-219ENST00000553488 ATG14Q6ZNE5 492 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms