RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 DNA2P51530 1060 aa12.54□□□□□ -0.4
SNRPF-204ENST00000552085 CUL4AQ13619 759 aa12.54□□□□□ -0.4
SNRPF-204ENST00000552085 LRRC14Q15048 493 aa12.54□□□□□ -0.4
SNRPF-204ENST00000552085 C8orf34Q49A92 452 aa12.54□□□□□ -0.4
SNRPF-204ENST00000552085 ZNF805Q5CZA5 627 aa12.54□□□□□ -0.4
SNRPF-204ENST00000552085 CARD16Q5EG05 197 aa12.54□□□□□ -0.4
SNRPF-204ENST00000552085 SYPL2Q5VXT5 272 aa12.54□□□□□ -0.4
SNRPF-204ENST00000552085 TMEM71Q6P5X7 295 aa12.54□□□□□ -0.4
SNRPF-204ENST00000552085 FOXR2Q6PJQ5 311 aa12.54□□□□□ -0.4
SNRPF-204ENST00000552085 FAM186BQ8IYM0 893 aa12.54□□□□□ -0.4
SNRPF-204ENST00000552085 PCDH20Q8N6Y1 951 aaKnown RBP12.54□□□□□ -0.4
SNRPF-204ENST00000552085 DCAF4L2Q8NA75 395 aa12.54□□□□□ -0.4
SNRPF-204ENST00000552085 SLC35F5Q8WV83 523 aa12.54□□□□□ -0.4
SNRPF-204ENST00000552085 OR1E3Q8WZA6 343 aa12.54□□□□□ -0.4
SNRPF-204ENST00000552085 FAM149B1Q96BN6 582 aa12.54□□□□□ -0.4
SNRPF-204ENST00000552085 CEP44Q9C0F1 390 aa12.54□□□□□ -0.4
SNRPF-204ENST00000552085 MIS12Q9H081 205 aa12.54□□□□□ -0.4
SNRPF-204ENST00000552085 TMEM168Q9H0V1 697 aa12.54□□□□□ -0.4
SNRPF-204ENST00000552085 KCTD10Q9H3F6 313 aa12.54□□□□□ -0.4
SNRPF-204ENST00000552085 PDP2Q9P2J9 529 aa12.54□□□□□ -0.4
SNRPF-204ENST00000552085 OR1A2Q9Y585 309 aa12.54□□□□□ -0.4
SNRPF-204ENST00000552085 PCDHGB7Q9Y5F8 929 aa12.54□□□□□ -0.4
SNRPF-204ENST00000552085 IGHV1OR21-1A0A087WYE8 117 aa12.53□□□□□ -0.4
SNRPF-204ENST00000552085 O00370 1275 aa12.53□□□□□ -0.4
SNRPF-204ENST00000552085 ZG16O60844 167 aa12.53□□□□□ -0.4
SNRPF-204ENST00000552085 NADKO95544 446 aaPredicted RBP12.53□□□□□ -0.4
SNRPF-204ENST00000552085 NR3C1P04150 777 aa12.53□□□□□ -0.4
SNRPF-204ENST00000552085 NEFLP07196 543 aa12.53□□□□□ -0.4
SNRPF-204ENST00000552085 RHOCP08134 193 aa12.53□□□□□ -0.4
SNRPF-204ENST00000552085 BMP6P22004 513 aa12.53□□□□□ -0.4
SNRPF-204ENST00000552085 CLCN1P35523 988 aa12.53□□□□□ -0.4
SNRPF-204ENST00000552085 VAMP7P51809 220 aa12.53□□□□□ -0.4
SNRPF-204ENST00000552085 ITGA1P56199 1179 aa12.53□□□□□ -0.4
SNRPF-204ENST00000552085 HDAC4P56524 1084 aa12.53□□□□□ -0.4
SNRPF-204ENST00000552085 PPP3CAQ08209 521 aa12.53□□□□□ -0.4
SNRPF-204ENST00000552085 BIRC2Q13490 618 aa12.53□□□□□ -0.4
SNRPF-204ENST00000552085 AUHQ13825 339 aaKnown RBP12.53□□□□□ -0.4
SNRPF-204ENST00000552085 INPP5AQ14642 412 aa12.53□□□□□ -0.4
SNRPF-204ENST00000552085 STK38Q15208 465 aa12.53□□□□□ -0.4
SNRPF-204ENST00000552085 CHRNA6Q15825 494 aa12.53□□□□□ -0.4
SNRPF-204ENST00000552085 WSCD2Q2TBF2 565 aa12.53□□□□□ -0.4
SNRPF-204ENST00000552085 ERICH6BQ5W0A0 696 aa12.53□□□□□ -0.4
SNRPF-204ENST00000552085 CPZQ66K79 652 aa12.53□□□□□ -0.4
SNRPF-204ENST00000552085 LYSMD3Q7Z3D4 306 aa12.53□□□□□ -0.4
SNRPF-204ENST00000552085 HPS6Q86YV9 775 aa12.53□□□□□ -0.4
SNRPF-204ENST00000552085 CCL4L1Q8NHW4 92 aa12.53□□□□□ -0.4
SNRPF-204ENST00000552085 ZDHHC1Q8WTX9 485 aa12.53□□□□□ -0.4
SNRPF-204ENST00000552085 VANGL2Q9ULK5 521 aa12.53□□□□□ -0.4
SNRPF-204ENST00000552085 FRMD4BQ9Y2L6 1034 aa12.53□□□□□ -0.4
SNRPF-204ENST00000552085 POLEQ07864 2286 aa12.53□□□□□ -0.4
SNRPF-204ENST00000552085 PKDREJQ9NTG1 2253 aa12.52□□□□□ -0.41
SNRPF-204ENST00000552085 ZSCAN5CA6NGD5 496 aaPredicted RBP12.52□□□□□ -0.41
SNRPF-204ENST00000552085 A8MU76 341 aa12.52□□□□□ -0.41
SNRPF-204ENST00000552085 POLR1CO15160 346 aaPredicted RBP12.52□□□□□ -0.41
SNRPF-204ENST00000552085 LRRTM2O43300 516 aa12.52□□□□□ -0.41
SNRPF-204ENST00000552085 CUTAO60888 179 aa12.52□□□□□ -0.41
SNRPF-204ENST00000552085 FAM155BO75949 473 aa12.52□□□□□ -0.41
SNRPF-204ENST00000552085 TRUB2O95900 331 aaKnown RBP12.52□□□□□ -0.41
SNRPF-204ENST00000552085 IGLV3-25P01717 112 aa12.52□□□□□ -0.41
SNRPF-204ENST00000552085 FGF1P05230 155 aa12.52□□□□□ -0.41
SNRPF-204ENST00000552085 TRIM49P0CI25 452 aa12.52□□□□□ -0.41
SNRPF-204ENST00000552085 TRIM49CP0CI26 452 aa12.52□□□□□ -0.41
SNRPF-204ENST00000552085 VDRP11473 427 aa12.52□□□□□ -0.41
SNRPF-204ENST00000552085 TIMP2P16035 220 aa12.52□□□□□ -0.41
SNRPF-204ENST00000552085 SERPINH1P50454 418 aaKnown RBP12.52□□□□□ -0.41
SNRPF-204ENST00000552085 CCL11P51671 97 aa12.52□□□□□ -0.41
SNRPF-204ENST00000552085 CDH4P55283 916 aa12.52□□□□□ -0.41
SNRPF-204ENST00000552085 MCCD1P59942 119 aaPredicted RBP12.52□□□□□ -0.41
SNRPF-204ENST00000552085 CDK18Q07002 472 aa12.52□□□□□ -0.41
SNRPF-204ENST00000552085 STK4Q13043 487 aa12.52□□□□□ -0.41
SNRPF-204ENST00000552085 CHAF1BQ13112 559 aa12.52□□□□□ -0.41
SNRPF-204ENST00000552085 SHC4Q6S5L8 630 aa12.52□□□□□ -0.41
SNRPF-204ENST00000552085 C6orf15Q6UXA7 325 aaPredicted RBP12.52□□□□□ -0.41
SNRPF-204ENST00000552085 INTS8Q75QN2 995 aaKnown RBP12.52□□□□□ -0.41
SNRPF-204ENST00000552085 BEND5Q7L4P6 421 aa12.52□□□□□ -0.41
SNRPF-204ENST00000552085 TTC7BQ86TV6 843 aa12.52□□□□□ -0.41
SNRPF-204ENST00000552085 SLC47A2Q86VL8 602 aa12.52□□□□□ -0.41
SNRPF-204ENST00000552085 IQCKQ8N0W5 287 aa12.52□□□□□ -0.41
SNRPF-204ENST00000552085 RBMXL3Q8N7X1 1067 aaKnown RBP12.52□□□□□ -0.41
SNRPF-204ENST00000552085 OR56A4Q8NGH8 313 aa12.52□□□□□ -0.41
SNRPF-204ENST00000552085 EEF2KMTQ96G04 330 aa12.52□□□□□ -0.41
SNRPF-204ENST00000552085 WRAP53Q9BUR4 548 aaKnown RBP12.52□□□□□ -0.41
SNRPF-204ENST00000552085 ZMYND15Q9H091 742 aa12.52□□□□□ -0.41
SNRPF-204ENST00000552085 BLZF1Q9H2G9 400 aa12.52□□□□□ -0.41
SNRPF-204ENST00000552085 MMRN2Q9H8L6 949 aa12.52□□□□□ -0.41
SNRPF-204ENST00000552085 ACSS2Q9NR19 701 aa12.52□□□□□ -0.41
SNRPF-204ENST00000552085 SPATS2LQ9NUQ6 558 aaKnown RBP12.52□□□□□ -0.41
SNRPF-204ENST00000552085 PCDHGA6Q9Y5G7 932 aa12.52□□□□□ -0.41
SNRPF-204ENST00000552085 DOCK4Q8N1I0 1966 aa12.52□□□□□ -0.41
SNRPF-204ENST00000552085 POLR2DO15514 142 aaKnown RBP12.51□□□□□ -0.41
SNRPF-204ENST00000552085 MAP3K6O95382 1288 aa12.51□□□□□ -0.41
SNRPF-204ENST00000552085 ECEL1O95672 775 aa12.51□□□□□ -0.41
SNRPF-204ENST00000552085 SLC2A3P11169 496 aa12.51□□□□□ -0.41
SNRPF-204ENST00000552085 DRD2P14416 443 aa12.51□□□□□ -0.41
SNRPF-204ENST00000552085 CASP1P29466 404 aa12.51□□□□□ -0.41
SNRPF-204ENST00000552085 GKP32189 559 aa12.51□□□□□ -0.41
SNRPF-204ENST00000552085 EIF4EBP2Q13542 120 aaPredicted RBP12.51□□□□□ -0.41
SNRPF-204ENST00000552085 CUL4BQ13620 913 aa12.51□□□□□ -0.41
SNRPF-204ENST00000552085 NFIL3Q16649 462 aa12.51□□□□□ -0.41
SNRPF-204ENST00000552085 LRRC73Q5JTD7 316 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms