RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 CREG1O75629 220 aa13.55□□□□□ -0.24
SNRPF-203ENST00000551316 CD160O95971 181 aa13.55□□□□□ -0.24
SNRPF-203ENST00000551316 FGF1P05230 155 aa13.55□□□□□ -0.24
SNRPF-203ENST00000551316 DRD2P14416 443 aa13.55□□□□□ -0.24
SNRPF-203ENST00000551316 CLCN1P35523 988 aa13.55□□□□□ -0.24
SNRPF-203ENST00000551316 SLC8A3P57103 927 aa13.55□□□□□ -0.24
SNRPF-203ENST00000551316 NUCB2P80303 420 aa13.55□□□□□ -0.24
SNRPF-203ENST00000551316 SRSF11Q05519 484 aaKnown RBP13.55□□□□□ -0.24
SNRPF-203ENST00000551316 INPP5AQ14642 412 aa13.55□□□□□ -0.24
SNRPF-203ENST00000551316 PLEKHN1Q494U1 663 aaPredicted RBP13.55□□□□□ -0.24
SNRPF-203ENST00000551316 CEACAM20Q6UY09 585 aa13.55□□□□□ -0.24
SNRPF-203ENST00000551316 IRF2BP1Q8IU81 584 aa13.55□□□□□ -0.24
SNRPF-203ENST00000551316 PELI3Q8N2H9 469 aa13.55□□□□□ -0.24
SNRPF-203ENST00000551316 ESX1Q8N693 406 aa13.55□□□□□ -0.24
SNRPF-203ENST00000551316 HEPHQ9BQS7 1158 aa13.55□□□□□ -0.24
SNRPF-203ENST00000551316 GSX1Q9H4S2 264 aaPredicted RBP13.55□□□□□ -0.24
SNRPF-203ENST00000551316 SLC39A2Q9NP94 309 aa13.55□□□□□ -0.24
SNRPF-203ENST00000551316 SIDT1Q9NXL6 827 aaKnown RBP13.55□□□□□ -0.24
SNRPF-203ENST00000551316 SNX10Q9Y5X0 201 aa13.55□□□□□ -0.24
SNRPF-203ENST00000551316 MYO7BQ6PIF6 2116 aa13.55□□□□□ -0.24
SNRPF-203ENST00000551316 JMJD1CQ15652 2540 aa13.55□□□□□ -0.24
SNRPF-203ENST00000551316 ATRQ13535 2644 aa13.54□□□□□ -0.24
SNRPF-203ENST00000551316 PIPSLA2A3N6 862 aa13.54□□□□□ -0.24
SNRPF-203ENST00000551316 E2F3O00716 465 aa13.54□□□□□ -0.24
SNRPF-203ENST00000551316 TM7SF2O76062 418 aa13.54□□□□□ -0.24
SNRPF-203ENST00000551316 TNFP01375 233 aa13.54□□□□□ -0.24
SNRPF-203ENST00000551316 PCCBP05166 539 aa13.54□□□□□ -0.24
SNRPF-203ENST00000551316 UGT2B4P06133 528 aa13.54□□□□□ -0.24
SNRPF-203ENST00000551316 ITGA3P26006 1051 aa13.54□□□□□ -0.24
SNRPF-203ENST00000551316 PTGER4P35408 488 aa13.54□□□□□ -0.24
SNRPF-203ENST00000551316 PEX5P50542 639 aa13.54□□□□□ -0.24
SNRPF-203ENST00000551316 ARF5P84085 180 aa13.54□□□□□ -0.24
SNRPF-203ENST00000551316 AUHQ13825 339 aaKnown RBP13.54□□□□□ -0.24
SNRPF-203ENST00000551316 MAP7Q14244 749 aa13.54□□□□□ -0.24
SNRPF-203ENST00000551316 RABGAP1LQ5R372 815 aa13.54□□□□□ -0.24
SNRPF-203ENST00000551316 ARTNQ5T4W7 220 aa13.54□□□□□ -0.24
SNRPF-203ENST00000551316 TTC39BQ5VTQ0 682 aaPredicted RBP13.54□□□□□ -0.24
SNRPF-203ENST00000551316 ARHGAP22Q7Z5H3 698 aa13.54□□□□□ -0.24
SNRPF-203ENST00000551316 ZSCAN30Q86W11 494 aa13.54□□□□□ -0.24
SNRPF-203ENST00000551316 DCAF4L2Q8NA75 395 aa13.54□□□□□ -0.24
SNRPF-203ENST00000551316 TMC2Q8TDI7 906 aa13.54□□□□□ -0.24
SNRPF-203ENST00000551316 ZDHHC1Q8WTX9 485 aa13.54□□□□□ -0.24
SNRPF-203ENST00000551316 SLC35F5Q8WV83 523 aa13.54□□□□□ -0.24
SNRPF-203ENST00000551316 TMUB1Q9BVT8 246 aa13.54□□□□□ -0.24
SNRPF-203ENST00000551316 SUDS3Q9H7L9 328 aaPredicted RBP13.54□□□□□ -0.24
SNRPF-203ENST00000551316 PDP2Q9P2J9 529 aa13.54□□□□□ -0.24
SNRPF-203ENST00000551316 I6L893 689 aaPredicted RBP13.53□□□□□ -0.24
SNRPF-203ENST00000551316 ZMPSTE24O75844 475 aa13.53□□□□□ -0.24
SNRPF-203ENST00000551316 TRUB2O95900 331 aaKnown RBP13.53□□□□□ -0.24
SNRPF-203ENST00000551316 RHOCP08134 193 aa13.53□□□□□ -0.24
SNRPF-203ENST00000551316 SETSIPP0DME0 302 aa13.53□□□□□ -0.24
SNRPF-203ENST00000551316 CD19P15391 556 aa13.53□□□□□ -0.24
SNRPF-203ENST00000551316 TIMP2P16035 220 aa13.53□□□□□ -0.24
SNRPF-203ENST00000551316 AK4P27144 223 aaPredicted RBP13.53□□□□□ -0.24
SNRPF-203ENST00000551316 SERPINH1P50454 418 aaKnown RBP13.53□□□□□ -0.24
SNRPF-203ENST00000551316 DNA2P51530 1060 aa13.53□□□□□ -0.24
SNRPF-203ENST00000551316 SNRPFP62306 86 aaKnown RBP13.53□□□□□ -0.24
SNRPF-203ENST00000551316 DNM1Q05193 864 aaKnown RBP13.53□□□□□ -0.24
SNRPF-203ENST00000551316 LAMB3Q13751 1172 aa13.53□□□□□ -0.24
SNRPF-203ENST00000551316 E2F4Q16254 413 aa13.53□□□□□ -0.24
SNRPF-203ENST00000551316 CLPPQ16740 277 aaPredicted RBP13.53□□□□□ -0.24
SNRPF-203ENST00000551316 SMTNL2Q2TAL5 461 aa13.53□□□□□ -0.24
SNRPF-203ENST00000551316 CRB2Q5IJ48 1285 aa13.53□□□□□ -0.24
SNRPF-203ENST00000551316 TMEM71Q6P5X7 295 aa13.53□□□□□ -0.24
SNRPF-203ENST00000551316 NAGSQ8N159 534 aa13.53□□□□□ -0.24
SNRPF-203ENST00000551316 FDCSPQ8NFU4 85 aa13.53□□□□□ -0.24
SNRPF-203ENST00000551316 CT55Q8WUE5 264 aa13.53□□□□□ -0.24
SNRPF-203ENST00000551316 ULBP3Q9BZM4 244 aa13.53□□□□□ -0.24
SNRPF-203ENST00000551316 IMPG2Q9BZV3 1241 aa13.53□□□□□ -0.24
SNRPF-203ENST00000551316 TRIT1Q9H3H1 467 aaKnown RBP13.53□□□□□ -0.24
SNRPF-203ENST00000551316 ACTL8Q9H568 366 aa13.53□□□□□ -0.24
SNRPF-203ENST00000551316 AKIRIN1Q9H9L7 192 aaPredicted RBP13.53□□□□□ -0.24
SNRPF-203ENST00000551316 ANLNQ9NQW6 1124 aa13.53□□□□□ -0.24
SNRPF-203ENST00000551316 FBXO8Q9NRD0 319 aa13.53□□□□□ -0.24
SNRPF-203ENST00000551316 HESX1Q9UBX0 185 aa13.53□□□□□ -0.24
SNRPF-203ENST00000551316 OSGIN2Q9Y236 505 aa13.53□□□□□ -0.24
SNRPF-203ENST00000551316 HS3ST4Q9Y661 456 aa13.53□□□□□ -0.24
SNRPF-203ENST00000551316 CACNA1CQ13936 2221 aa13.53□□□□□ -0.24
SNRPF-203ENST00000551316 CSPG4Q6UVK1 2322 aa13.53□□□□□ -0.24
SNRPF-203ENST00000551316 SYNJ2BP-COX16A0A087WUM0 186 aa13.52□□□□□ -0.25
SNRPF-203ENST00000551316 TOR1BO14657 336 aa13.52□□□□□ -0.25
SNRPF-203ENST00000551316 CEACAM4O75871 244 aa13.52□□□□□ -0.25
SNRPF-203ENST00000551316 FUCA1P04066 466 aa13.52□□□□□ -0.25
SNRPF-203ENST00000551316 PTGIRP43119 386 aa13.52□□□□□ -0.25
SNRPF-203ENST00000551316 CLCN6P51797 869 aa13.52□□□□□ -0.25
SNRPF-203ENST00000551316 DNASE1L3Q13609 305 aa13.52□□□□□ -0.25
SNRPF-203ENST00000551316 LRRC14Q15048 493 aa13.52□□□□□ -0.25
SNRPF-203ENST00000551316 CHRNA6Q15825 494 aa13.52□□□□□ -0.25
SNRPF-203ENST00000551316 KNOP1Q1ED39 458 aaKnown RBP13.52□□□□□ -0.25
SNRPF-203ENST00000551316 CARD16Q5EG05 197 aa13.52□□□□□ -0.25
SNRPF-203ENST00000551316 CCDC73Q6ZRK6 1079 aa13.52□□□□□ -0.25
SNRPF-203ENST00000551316 GLIS1Q8NBF1 620 aa13.52□□□□□ -0.25
SNRPF-203ENST00000551316 RAB7BQ96AH8 199 aa13.52□□□□□ -0.25
SNRPF-203ENST00000551316 FAM149B1Q96BN6 582 aa13.52□□□□□ -0.25
SNRPF-203ENST00000551316 KLHL32Q96NJ5 620 aa13.52□□□□□ -0.25
SNRPF-203ENST00000551316 BARD1Q99728 777 aaKnown RBP13.52□□□□□ -0.25
SNRPF-203ENST00000551316 C2orf49Q9BVC5 232 aaPredicted RBP13.52□□□□□ -0.25
SNRPF-203ENST00000551316 LGR4Q9BXB1 951 aa13.52□□□□□ -0.25
SNRPF-203ENST00000551316 KBTBD4Q9NVX7 518 aa13.52□□□□□ -0.25
SNRPF-203ENST00000551316 COX16Q9P0S2 106 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms