RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 TNIP2Q8NFZ5 429 aa4.72□□□□□ -1.65
GPN3-209ENST00000551079 ZSCAN31Q96LW9 406 aaPredicted RBP4.72□□□□□ -1.65
GPN3-209ENST00000551079 EYA3Q99504 573 aa4.72□□□□□ -1.65
GPN3-209ENST00000551079 HERPUD2Q9BSE4 406 aa4.72□□□□□ -1.65
GPN3-209ENST00000551079 SMYD2Q9NRG4 433 aa4.72□□□□□ -1.65
GPN3-209ENST00000551079 DONSONQ9NYP3 566 aa4.72□□□□□ -1.65
GPN3-209ENST00000551079 CARD8Q9Y2G2 431 aa4.72□□□□□ -1.65
GPN3-209ENST00000551079 PCDHGB3Q9Y5G1 929 aa4.72□□□□□ -1.65
GPN3-209ENST00000551079 ATXN2Q99700 1313 aaKnown RBP4.72□□□□□ -1.65
GPN3-209ENST00000551079 A0A0B4J293 547 aa4.71□□□□□ -1.66
GPN3-209ENST00000551079 BMPR1BO00238 502 aa4.71□□□□□ -1.66
GPN3-209ENST00000551079 ZIC3O60481 467 aa4.71□□□□□ -1.66
GPN3-209ENST00000551079 GUCY1B2O75343 617 aa4.71□□□□□ -1.66
GPN3-209ENST00000551079 IGLV2-11P01706 119 aa4.71□□□□□ -1.66
GPN3-209ENST00000551079 UBE3AQ05086 875 aa4.71□□□□□ -1.66
GPN3-209ENST00000551079 NEDD9Q14511 834 aa4.71□□□□□ -1.66
GPN3-209ENST00000551079 PPP6R3Q5H9R7 873 aaPredicted RBP4.71□□□□□ -1.66
GPN3-209ENST00000551079 SERTAD4-AS1Q5TG53 156 aa4.71□□□□□ -1.66
GPN3-209ENST00000551079 ATG16L1Q676U5 607 aa4.71□□□□□ -1.66
GPN3-209ENST00000551079 FAM122CQ6P4D5 195 aa4.71□□□□□ -1.66
GPN3-209ENST00000551079 LDHAL6AQ6ZMR3 332 aa4.71□□□□□ -1.66
GPN3-209ENST00000551079 TUBA1AQ71U36 451 aa4.71□□□□□ -1.66
GPN3-209ENST00000551079 TADA2BQ86TJ2 420 aa4.71□□□□□ -1.66
GPN3-209ENST00000551079 KIAA2013Q8IYS2 634 aa4.71□□□□□ -1.66
GPN3-209ENST00000551079 MUC20Q8N307 709 aaPredicted RBP4.71□□□□□ -1.66
GPN3-209ENST00000551079 RUFY2Q8WXA3 655 aa4.71□□□□□ -1.66
GPN3-209ENST00000551079 TUBA1CQ9BQE3 449 aa4.71□□□□□ -1.66
GPN3-209ENST00000551079 CISD1Q9NZ45 108 aaKnown RBP4.71□□□□□ -1.66
GPN3-209ENST00000551079 PEMTQ9UBM1 199 aa4.71□□□□□ -1.66
GPN3-209ENST00000551079 CDC14AQ9UNH5 594 aa4.71□□□□□ -1.66
GPN3-209ENST00000551079 NFE2L3Q9Y4A8 694 aa4.71□□□□□ -1.66
GPN3-209ENST00000551079 PCDHAC2Q9Y5I4 1007 aa4.71□□□□□ -1.66
GPN3-209ENST00000551079 PRAC2D3DTV9 90 aa4.7□□□□□ -1.66
GPN3-209ENST00000551079 TULP2O00295 520 aa4.7□□□□□ -1.66
GPN3-209ENST00000551079 TIPRLO75663 272 aa4.7□□□□□ -1.66
GPN3-209ENST00000551079 KDM4BO94953 1096 aa4.7□□□□□ -1.66
GPN3-209ENST00000551079 CLDN14O95500 239 aa4.7□□□□□ -1.66
GPN3-209ENST00000551079 AMD1P17707 334 aa4.7□□□□□ -1.66
GPN3-209ENST00000551079 HNRNPH1P31943 449 aaKnown RBP4.7□□□□□ -1.66
GPN3-209ENST00000551079 STX2P32856 288 aa4.7□□□□□ -1.66
GPN3-209ENST00000551079 HALP42357 657 aa4.7□□□□□ -1.66
GPN3-209ENST00000551079 CLDN2P57739 230 aa4.7□□□□□ -1.66
GPN3-209ENST00000551079 CHRNDQ07001 517 aa4.7□□□□□ -1.66
GPN3-209ENST00000551079 TROAPQ12815 778 aa4.7□□□□□ -1.66
GPN3-209ENST00000551079 TNFAIP1Q13829 316 aa4.7□□□□□ -1.66
GPN3-209ENST00000551079 OASLQ15646 514 aaKnown RBP4.7□□□□□ -1.66
GPN3-209ENST00000551079 AMZ1Q400G9 498 aa4.7□□□□□ -1.66
GPN3-209ENST00000551079 ANKRD18AQ8IVF6 992 aa4.7□□□□□ -1.66
GPN3-209ENST00000551079 SCCPDHQ8NBX0 429 aa4.7□□□□□ -1.66
GPN3-209ENST00000551079 SPATA20Q8TB22 786 aa4.7□□□□□ -1.66
GPN3-209ENST00000551079 CREB3L4Q8TEY5 395 aa4.7□□□□□ -1.66
GPN3-209ENST00000551079 SECTM1Q8WVN6 248 aa4.7□□□□□ -1.66
GPN3-209ENST00000551079 SORCS1Q8WY21 1168 aa4.7□□□□□ -1.66
GPN3-209ENST00000551079 ERGIC1Q969X5 290 aa4.7□□□□□ -1.66
GPN3-209ENST00000551079 MXRA8Q9BRK3 442 aa4.7□□□□□ -1.66
GPN3-209ENST00000551079 PHF7Q9BWX1 381 aaPredicted RBP4.7□□□□□ -1.66
GPN3-209ENST00000551079 EVA1AQ9H8M9 152 aa4.7□□□□□ -1.66
GPN3-209ENST00000551079 UBTD1Q9HAC8 227 aa4.7□□□□□ -1.66
GPN3-209ENST00000551079 RIC8AQ9NPQ8 531 aa4.7□□□□□ -1.66
GPN3-209ENST00000551079 SNTG1Q9NSN8 517 aa4.7□□□□□ -1.66
GPN3-209ENST00000551079 ZNF224Q9NZL3 707 aa4.7□□□□□ -1.66
GPN3-209ENST00000551079 KIAA1456Q9P272 454 aa4.7□□□□□ -1.66
GPN3-209ENST00000551079 SLC9A2Q9UBY0 812 aa4.7□□□□□ -1.66
GPN3-209ENST00000551079 SIX4Q9UIU6 781 aa4.7□□□□□ -1.66
GPN3-209ENST00000551079 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.7□□□□□ -1.66
GPN3-209ENST00000551079 KIF26BQ2KJY2 2108 aa4.69□□□□□ -1.66
GPN3-209ENST00000551079 IGHV4OR15-8A0A075B7B6 117 aa4.69□□□□□ -1.66
GPN3-209ENST00000551079 HNRNPCL2B2RXH8 293 aa4.69□□□□□ -1.66
GPN3-209ENST00000551079 TEX22C9J3V5 150 aa4.69□□□□□ -1.66
GPN3-209ENST00000551079 PEX14O75381 377 aa4.69□□□□□ -1.66
GPN3-209ENST00000551079 ITGAXP20702 1163 aa4.69□□□□□ -1.66
GPN3-209ENST00000551079 DGKAP23743 735 aa4.69□□□□□ -1.66
GPN3-209ENST00000551079 POU1F1P28069 291 aa4.69□□□□□ -1.66
GPN3-209ENST00000551079 PGM1P36871 562 aa4.69□□□□□ -1.66
GPN3-209ENST00000551079 VEPH1Q14D04 833 aa4.69□□□□□ -1.66
GPN3-209ENST00000551079 TAF11Q15544 211 aa4.69□□□□□ -1.66
GPN3-209ENST00000551079 ATP13A5Q4VNC0 1218 aa4.69□□□□□ -1.66
GPN3-209ENST00000551079 C9orf139Q6ZV77 190 aa4.69□□□□□ -1.66
GPN3-209ENST00000551079 GPAT4Q86UL3 456 aa4.69□□□□□ -1.66
GPN3-209ENST00000551079 ZBTB8BQ8NAP8 495 aaPredicted RBP4.69□□□□□ -1.66
GPN3-209ENST00000551079 C11orf65Q8NCR3 313 aa4.69□□□□□ -1.66
GPN3-209ENST00000551079 NEK9Q8TD19 979 aa4.69□□□□□ -1.66
GPN3-209ENST00000551079 FEM1CQ96JP0 617 aa4.69□□□□□ -1.66
GPN3-209ENST00000551079 C3orf30Q96M34 536 aa4.69□□□□□ -1.66
GPN3-209ENST00000551079 NODALQ96S42 347 aa4.69□□□□□ -1.66
GPN3-209ENST00000551079 SIN3AQ96ST3 1273 aa4.69□□□□□ -1.66
GPN3-209ENST00000551079 EPYCQ99645 322 aa4.69□□□□□ -1.66
GPN3-209ENST00000551079 EBF2Q9HAK2 575 aa4.69□□□□□ -1.66
GPN3-209ENST00000551079 CNOT7Q9UIV1 285 aaKnown RBP4.69□□□□□ -1.66
GPN3-209ENST00000551079 VDAC3Q9Y277 283 aa4.69□□□□□ -1.66
GPN3-209ENST00000551079 GREB1LQ9C091 1923 aaPredicted RBP4.68□□□□□ -1.66
GPN3-209ENST00000551079 KLK8O60259 260 aa4.68□□□□□ -1.66
GPN3-209ENST00000551079 PIP5K1CO60331 668 aa4.68□□□□□ -1.66
GPN3-209ENST00000551079 UMODP07911 640 aa4.68□□□□□ -1.66
GPN3-209ENST00000551079 LINC00271P0C7V0 271 aa4.68□□□□□ -1.66
GPN3-209ENST00000551079 SRCP12931 536 aa4.68□□□□□ -1.66
GPN3-209ENST00000551079 PSMC2P35998 433 aaKnown RBP4.68□□□□□ -1.66
GPN3-209ENST00000551079 EFNB1P98172 346 aa4.68□□□□□ -1.66
GPN3-209ENST00000551079 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.68□□□□□ -1.66
GPN3-209ENST00000551079 ZNF155Q12901 538 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms