RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 RILPQ96NA2 401 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 ECT2Q9H8V3 914 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 KCNK13Q9HB14 408 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 PDFQ9HBH1 243 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 SARS2Q9NP81 518 aaKnown RBP12.04□□□□□ -0.48
CCDC38-202ENST00000546386 SCUBE2Q9NQ36 999 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 DNMT3BQ9UBC3 853 aaKnown RBP12.04□□□□□ -0.48
CCDC38-202ENST00000546386 VPS51Q9UID3 782 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 SLCO3A1Q9UIG8 710 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 SH3BP1Q9Y3L3 701 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 WNT6Q9Y6F9 365 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 PTPRSQ13332 1948 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 TMEM233B4DJY2 109 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 NEMP1O14524 444 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 LDB2O43679 373 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 CACNG3O60359 315 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 GREM1O60565 184 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 PLIN3O60664 434 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 GLUD1P00367 558 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 GOT2P00505 430 aaKnown RBP12.04□□□□□ -0.48
CCDC38-202ENST00000546386 DHRS4L1P0CG22 281 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 SLC35E2BP0CK96 405 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 ITGB6P18564 788 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 CRHR1P34998 444 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 CDKN2DP55273 166 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 CDH4P55283 916 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 SMARCB1Q12824 385 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 RCN2Q14257 317 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 C1orf53Q5VUE5 145 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 CMTR2Q8IYT2 770 aaKnown RBP12.04□□□□□ -0.48
CCDC38-202ENST00000546386 SNX31Q8N9S9 440 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 GALPQ9UBC7 116 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 PRKAG3Q9UGI9 489 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 FETUBQ9UGM5 382 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 PLXNA3P51805 1871 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 A0A1B0GVM2 712 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 CCDC162PA2VCL2 907 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 TCAF2A6NFQ2 919 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 ERI2A8K979 691 aaKnown RBP12.03□□□□□ -0.48
CCDC38-202ENST00000546386 WASH4PA8MWX3 477 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 PRLP01236 227 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 BPGMP07738 259 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 KCNA5P22460 613 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 CA5AP35218 305 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 CSE1LP55060 971 aaKnown RBP12.03□□□□□ -0.48
CCDC38-202ENST00000546386 RHOAP61586 193 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 ARMC12Q5T9G4 340 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 GRTP1Q5TC63 336 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 ESAMQ96AP7 390 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 LRRC37BQ96QE4 947 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 HERC2P3Q9BVR0 1158 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 OSBPL1AQ9BXW6 950 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 RYDENQ9NUL5 291 aaKnown RBP12.03□□□□□ -0.48
CCDC38-202ENST00000546386 TLK1Q9UKI8 766 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 DNAJC16Q9Y2G8 782 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 RAI2Q9Y5P3 530 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 LINC01553A4QN01 128 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 NCF1BA6NI72 391 aaPredicted RBP12.03□□□□□ -0.48
CCDC38-202ENST00000546386 NCF1CA8MVU1 366 aaPredicted RBP12.03□□□□□ -0.48
CCDC38-202ENST00000546386 LEFTY2O00292 366 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 CLDN11O75508 207 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 PARNO95453 639 aaKnown RBP12.03□□□□□ -0.48
CCDC38-202ENST00000546386 NCF1P14598 390 aaPredicted RBP12.03□□□□□ -0.48
CCDC38-202ENST00000546386 HNRNPLP14866 589 aaKnown RBP eCLIP12.03□□□□□ -0.48
CCDC38-202ENST00000546386 VIPR2P41587 438 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 KCNC1P48547 511 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 NAGLUP54802 743 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 TRAF2Q12933 501 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 MSLNQ13421 630 aaPredicted RBP12.03□□□□□ -0.48
CCDC38-202ENST00000546386 UBAP2LQ14157 1087 aaKnown RBP12.03□□□□□ -0.48
CCDC38-202ENST00000546386 PPM1LQ5SGD2 360 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 TSTD2Q5T7W7 516 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 ASTLQ6HA08 431 aaPredicted RBP12.03□□□□□ -0.48
CCDC38-202ENST00000546386 TMC8Q8IU68 726 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 SFTPA1Q8IWL2 248 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 CENPLQ8N0S6 344 aaPredicted RBP12.03□□□□□ -0.48
CCDC38-202ENST00000546386 MRPL43Q8N983 215 aaKnown RBP12.03□□□□□ -0.48
CCDC38-202ENST00000546386 PDZD8Q8NEN9 1154 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 FBXO27Q8NI29 283 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 CYB5D2Q8WUJ1 264 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 C10orf82Q8WW14 230 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 ALKBH8Q96BT7 664 aaKnown RBP12.03□□□□□ -0.48
CCDC38-202ENST00000546386 MARK4Q96L34 752 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 NAT9Q9BTE0 207 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 TREX1Q9NSU2 369 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 FAM8A1Q9UBU6 413 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 INTS6Q9UL03 887 aaKnown RBP12.03□□□□□ -0.48
CCDC38-202ENST00000546386 PLXNA4Q9HCM2 1894 aa12.03□□□□□ -0.48
CCDC38-202ENST00000546386 LRRC14BA6NHZ5 514 aa12.02□□□□□ -0.48
CCDC38-202ENST00000546386 ADH1AP07327 375 aa12.02□□□□□ -0.48
CCDC38-202ENST00000546386 FGF3P11487 239 aaPredicted RBP12.02□□□□□ -0.48
CCDC38-202ENST00000546386 CPA3P15088 417 aa12.02□□□□□ -0.48
CCDC38-202ENST00000546386 TSHRP16473 764 aa12.02□□□□□ -0.48
CCDC38-202ENST00000546386 EPHB1P54762 984 aa12.02□□□□□ -0.48
CCDC38-202ENST00000546386 STX3Q13277 289 aa12.02□□□□□ -0.48
CCDC38-202ENST00000546386 RASA2Q15283 850 aa12.02□□□□□ -0.48
CCDC38-202ENST00000546386 PDPK2PQ6A1A2 396 aa12.02□□□□□ -0.48
CCDC38-202ENST00000546386 TMEM207Q6UWW9 146 aa12.02□□□□□ -0.48
CCDC38-202ENST00000546386 RFLNAQ6ZTI6 216 aa12.02□□□□□ -0.48
CCDC38-202ENST00000546386 GLT6D1Q7Z4J2 308 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms