RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 TTKP33981 857 aa12.91□□□□□ -0.34
PDZD4-209ENST00000544474 CRY1Q16526 586 aa12.91□□□□□ -0.34
PDZD4-209ENST00000544474 VPS26BQ4G0F5 336 aa12.91□□□□□ -0.34
PDZD4-209ENST00000544474 XRRA1Q6P2D8 792 aa12.91□□□□□ -0.34
PDZD4-209ENST00000544474 TICAM1Q8IUC6 712 aa12.91□□□□□ -0.34
PDZD4-209ENST00000544474 CPSF7Q8N684 471 aaKnown RBP12.91□□□□□ -0.34
PDZD4-209ENST00000544474 RNF34Q969K3 372 aa12.91□□□□□ -0.34
PDZD4-209ENST00000544474 RNF145Q96MT1 663 aa12.91□□□□□ -0.34
PDZD4-209ENST00000544474 SPC25Q9HBM1 224 aa12.91□□□□□ -0.34
PDZD4-209ENST00000544474 TRIM39Q9HCM9 518 aa12.91□□□□□ -0.34
PDZD4-209ENST00000544474 PNPLA8Q9NP80 782 aa12.91□□□□□ -0.34
PDZD4-209ENST00000544474 SMOXQ9NWM0 555 aa12.91□□□□□ -0.34
PDZD4-209ENST00000544474 PRORSD1PA6NEY8 169 aa12.91□□□□□ -0.34
PDZD4-209ENST00000544474 CCRL2O00421 344 aa12.91□□□□□ -0.34
PDZD4-209ENST00000544474 PRKCHP24723 683 aa12.91□□□□□ -0.34
PDZD4-209ENST00000544474 ARL4AP40617 200 aa12.91□□□□□ -0.34
PDZD4-209ENST00000544474 PHC1P78364 1004 aa12.91□□□□□ -0.34
PDZD4-209ENST00000544474 RAB39AQ14964 217 aa12.91□□□□□ -0.34
PDZD4-209ENST00000544474 NATD1Q8N6N6 113 aa12.91□□□□□ -0.34
PDZD4-209ENST00000544474 ADAMTS16Q8TE57 1224 aa12.91□□□□□ -0.34
PDZD4-209ENST00000544474 PBXIP1Q96AQ6 731 aa12.91□□□□□ -0.34
PDZD4-209ENST00000544474 LRRC39Q96DD0 335 aa12.91□□□□□ -0.34
PDZD4-209ENST00000544474 ZFYVE19Q96K21 471 aa12.91□□□□□ -0.34
PDZD4-209ENST00000544474 TOR3AQ9H497 397 aa12.91□□□□□ -0.34
PDZD4-209ENST00000544474 CCDC177Q9NQR7 707 aaPredicted RBP12.91□□□□□ -0.34
PDZD4-209ENST00000544474 PDLIM7Q9NR12 457 aa12.91□□□□□ -0.34
PDZD4-209ENST00000544474 SPEF1Q9Y4P9 236 aa12.91□□□□□ -0.34
PDZD4-209ENST00000544474 RAD54BQ9Y620 910 aa12.91□□□□□ -0.34
PDZD4-209ENST00000544474 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.9□□□□□ -0.34
PDZD4-209ENST00000544474 HUS1O60921 280 aa12.9□□□□□ -0.34
PDZD4-209ENST00000544474 IL7RP16871 459 aa12.9□□□□□ -0.34
PDZD4-209ENST00000544474 CCNA2P20248 432 aa12.9□□□□□ -0.34
PDZD4-209ENST00000544474 PTPN11Q06124 597 aaPredicted RBP12.9□□□□□ -0.34
PDZD4-209ENST00000544474 CTU1Q7Z7A3 348 aaKnown RBP12.9□□□□□ -0.34
PDZD4-209ENST00000544474 DSG4Q86SJ6 1040 aa12.9□□□□□ -0.34
PDZD4-209ENST00000544474 AKAP14Q86UN6 197 aa12.9□□□□□ -0.34
PDZD4-209ENST00000544474 URGCPQ8TCY9 931 aa12.9□□□□□ -0.34
PDZD4-209ENST00000544474 ITCHQ96J02 903 aa12.9□□□□□ -0.34
PDZD4-209ENST00000544474 ELMO2Q96JJ3 720 aa12.9□□□□□ -0.34
PDZD4-209ENST00000544474 SIK2Q9H0K1 926 aa12.9□□□□□ -0.34
PDZD4-209ENST00000544474 TSPAN16Q9UKR8 245 aa12.9□□□□□ -0.34
PDZD4-209ENST00000544474 NCF1BA6NI72 391 aaPredicted RBP12.9□□□□□ -0.34
PDZD4-209ENST00000544474 NCF1CA8MVU1 366 aaPredicted RBP12.9□□□□□ -0.34
PDZD4-209ENST00000544474 C9IYK1 514 aa12.9□□□□□ -0.34
PDZD4-209ENST00000544474 NCF1P14598 390 aaPredicted RBP12.9□□□□□ -0.34
PDZD4-209ENST00000544474 HOXD10P28358 340 aa12.9□□□□□ -0.34
PDZD4-209ENST00000544474 GJA9P57773 515 aa12.9□□□□□ -0.34
PDZD4-209ENST00000544474 TRIM25Q14258 630 aaKnown RBP12.9□□□□□ -0.34
PDZD4-209ENST00000544474 FAM83EQ2M2I3 478 aa12.9□□□□□ -0.34
PDZD4-209ENST00000544474 ABHD15Q6UXT9 468 aa12.9□□□□□ -0.34
PDZD4-209ENST00000544474 STK32CQ86UX6 486 aa12.9□□□□□ -0.34
PDZD4-209ENST00000544474 CDKL3Q8IVW4 592 aaPredicted RBP12.9□□□□□ -0.34
PDZD4-209ENST00000544474 DENND6AQ8IWF6 608 aa12.9□□□□□ -0.34
PDZD4-209ENST00000544474 GDAP2Q9NXN4 497 aa12.9□□□□□ -0.34
PDZD4-209ENST00000544474 GGA3Q9NZ52 723 aa12.9□□□□□ -0.34
PDZD4-209ENST00000544474 CNOT6Q9ULM6 557 aaKnown RBP12.9□□□□□ -0.34
PDZD4-209ENST00000544474 STBD1O95210 358 aa12.9□□□□□ -0.35
PDZD4-209ENST00000544474 PRKCBP05771 671 aa12.9□□□□□ -0.35
PDZD4-209ENST00000544474 SPRP35270 261 aaPredicted RBP12.9□□□□□ -0.35
PDZD4-209ENST00000544474 STX1BP61266 288 aa12.9□□□□□ -0.35
PDZD4-209ENST00000544474 ITKQ08881 620 aa12.9□□□□□ -0.35
PDZD4-209ENST00000544474 SMU1Q2TAY7 513 aa12.9□□□□□ -0.35
PDZD4-209ENST00000544474 GATAD2AQ86YP4 633 aa12.9□□□□□ -0.35
PDZD4-209ENST00000544474 MINDY2Q8NBR6 621 aa12.9□□□□□ -0.35
PDZD4-209ENST00000544474 NXNL1Q96CM4 212 aa12.9□□□□□ -0.35
PDZD4-209ENST00000544474 SDCBP2Q9H190 292 aa12.9□□□□□ -0.35
PDZD4-209ENST00000544474 ALG2Q9H553 416 aa12.9□□□□□ -0.35
PDZD4-209ENST00000544474 BFARQ9NZS9 450 aa12.9□□□□□ -0.35
PDZD4-209ENST00000544474 KIAA1257Q9ULG3 409 aa12.9□□□□□ -0.35
PDZD4-209ENST00000544474 BTRCQ9Y297 605 aa12.9□□□□□ -0.35
PDZD4-209ENST00000544474 PCDHGA8Q9Y5G5 932 aa12.9□□□□□ -0.35
PDZD4-209ENST00000544474 PCDHA11Q9Y5I1 949 aa12.9□□□□□ -0.35
PDZD4-209ENST00000544474 CITO14578 2027 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 CDK2AP1O14519 115 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 SERPINB1P30740 379 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 CDH5P33151 784 aaPredicted RBP12.89□□□□□ -0.35
PDZD4-209ENST00000544474 GP5P40197 560 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 MRPS15P82914 257 aaKnown RBP12.89□□□□□ -0.35
PDZD4-209ENST00000544474 PRKCQQ04759 706 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 CAPSQ13938 189 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 GOLGA7BQ2TAP0 167 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 CCDC14Q49A88 953 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 BOLA3Q53S33 107 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 CEP78Q5JTW2 689 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 EEF1DP3Q658K8 133 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 DEPDC4Q8N2C3 294 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 ZCCHC7Q8N3Z6 543 aaKnown RBP12.89□□□□□ -0.35
PDZD4-209ENST00000544474 COPS5Q92905 334 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 DMRTB1Q96MA1 342 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 ADI1Q9BV57 179 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 LHX5Q9H2C1 402 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 PLEKHA5Q9HAU0 1116 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 PRRC2BQ5JSZ5 2229 aaKnown RBP12.89□□□□□ -0.35
PDZD4-209ENST00000544474 UBDO15205 165 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 SNAP29O95721 258 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 NFICP08651 508 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 TXNP10599 105 aaKnown RBP12.89□□□□□ -0.35
PDZD4-209ENST00000544474 ZNF143P52747 638 aaPredicted RBP12.89□□□□□ -0.35
PDZD4-209ENST00000544474 NDST1P52848 882 aa12.89□□□□□ -0.35
PDZD4-209ENST00000544474 LAMC2Q13753 1193 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms