RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 ASB12Q8WXK4 309 aa18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 SKA1Q96BD8 255 aa18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 CALR3Q96L12 384 aaKnown RBP18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 ZNF830Q96NB3 372 aaPredicted RBP18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 LENG8Q96PV6 779 aaPredicted RBP18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 HERPUD2Q9BSE4 406 aa18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 ATP8A1Q9Y2Q0 1164 aa18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 COQ6Q9Y2Z9 468 aa18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 PCDHA3Q9Y5H8 950 aa18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 CACNA1AO00555 2505 aa18.43■□□□□ 0.54
SNRPA1-203ENST00000540017 LRRK1Q38SD2 2015 aa18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 A0A1B0GTQ1 180 aa18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 JCHAINP01591 159 aa18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 THEGLP0DJG4 465 aa18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 CTNNA2P26232 953 aa18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 PEX5P50542 639 aa18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 NOVA1P51513 510 aaKnown RBP18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 FAM193AP78312 1265 aa18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 ITKQ08881 620 aa18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 ELP6Q0PNE2 266 aa18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 KIF5AQ12840 1032 aa18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 RALGDSQ12967 914 aa18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 PTPRRQ15256 657 aa18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 DBX2Q6ZNG2 339 aa18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 NT5DC3Q86UY8 548 aa18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 ZSCAN30Q86W11 494 aa18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 SLC22A18ASQ8N1D0 253 aa18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 CNTD1Q8N815 330 aa18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 ARRDC2Q8TBH0 407 aa18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 PDCD6IPQ8WUM4 868 aaKnown RBP18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 SPOCK2Q92563 424 aa18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 ALG3Q92685 438 aa18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 CENPTQ96BT3 561 aa18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 KLHDC7BQ96G42 594 aa18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 ELF4Q99607 663 aaPredicted RBP18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 IL12RB2Q99665 862 aa18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 POLR1EQ9GZS1 481 aaKnown RBP18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 GRPEL1Q9HAV7 217 aa18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 GDF3Q9NR23 364 aa18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 HS3ST3A1Q9Y663 406 aa18.42■□□□□ 0.54
SNRPA1-203ENST00000540017 A8MX80 341 aa18.41■□□□□ 0.54
SNRPA1-203ENST00000540017 SOCS5O75159 536 aa18.41■□□□□ 0.54
SNRPA1-203ENST00000540017 TM7SF2O76062 418 aa18.41■□□□□ 0.54
SNRPA1-203ENST00000540017 PDHA1P08559 390 aa18.41■□□□□ 0.54
SNRPA1-203ENST00000540017 LIG3P49916 1009 aa18.41■□□□□ 0.54
SNRPA1-203ENST00000540017 IFI35P80217 286 aaPredicted RBP18.41■□□□□ 0.54
SNRPA1-203ENST00000540017 AP1B1Q10567 949 aa18.41■□□□□ 0.54
SNRPA1-203ENST00000540017 OVGP1Q12889 678 aa18.41■□□□□ 0.54
SNRPA1-203ENST00000540017 TFDP2Q14188 446 aa18.41■□□□□ 0.54
SNRPA1-203ENST00000540017 PDK1Q15118 436 aa18.41■□□□□ 0.54
SNRPA1-203ENST00000540017 RALGPS1Q5JS13 557 aa18.41■□□□□ 0.54
SNRPA1-203ENST00000540017 AADACL2Q6P093 401 aa18.41■□□□□ 0.54
SNRPA1-203ENST00000540017 ERAP2Q6P179 960 aa18.41■□□□□ 0.54
SNRPA1-203ENST00000540017 Q6ZSR6 202 aa18.41■□□□□ 0.54
SNRPA1-203ENST00000540017 CCDC50Q8IVM0 306 aa18.41■□□□□ 0.54
SNRPA1-203ENST00000540017 NAXDQ8IW45 347 aa18.41■□□□□ 0.54
SNRPA1-203ENST00000540017 LRRC8AQ8IWT6 810 aa18.41■□□□□ 0.54
SNRPA1-203ENST00000540017 RBM41Q96IZ5 413 aaKnown RBP18.41■□□□□ 0.54
SNRPA1-203ENST00000540017 HEMGNQ9BXL5 484 aa18.41■□□□□ 0.54
SNRPA1-203ENST00000540017 CEP41Q9BYV8 373 aa18.41■□□□□ 0.54
SNRPA1-203ENST00000540017 MBNL1Q9NR56 388 aaKnown RBP18.41■□□□□ 0.54
SNRPA1-203ENST00000540017 BTBD3Q9Y2F9 522 aa18.41■□□□□ 0.54
SNRPA1-203ENST00000540017 TTLL3Q9Y4R7 772 aa18.41■□□□□ 0.54
SNRPA1-203ENST00000540017 PCDHB9Q9Y5E1 797 aa18.41■□□□□ 0.54
SNRPA1-203ENST00000540017 CNOT1A5YKK6 2376 aaKnown RBP18.4■□□□□ 0.54
SNRPA1-203ENST00000540017 A6NNZ2 444 aa18.4■□□□□ 0.54
SNRPA1-203ENST00000540017 PGLSO95336 258 aa18.4■□□□□ 0.54
SNRPA1-203ENST00000540017 CPP00450 1065 aa18.4■□□□□ 0.54
SNRPA1-203ENST00000540017 MMP2P08253 660 aa18.4■□□□□ 0.54
SNRPA1-203ENST00000540017 C6P13671 934 aa18.4■□□□□ 0.54
SNRPA1-203ENST00000540017 CEACAM1P13688 526 aa18.4■□□□□ 0.54
SNRPA1-203ENST00000540017 IGFALSP35858 605 aa18.4■□□□□ 0.54
SNRPA1-203ENST00000540017 CCT8P50990 548 aa18.4■□□□□ 0.54
SNRPA1-203ENST00000540017 POLR2LP62875 67 aaKnown RBP18.4■□□□□ 0.54
SNRPA1-203ENST00000540017 PPP2R5EQ16537 467 aa18.4■□□□□ 0.54
SNRPA1-203ENST00000540017 TPRG1LQ5T0D9 272 aa18.4■□□□□ 0.54
SNRPA1-203ENST00000540017 LIPIQ6XZB0 460 aa18.4■□□□□ 0.54
SNRPA1-203ENST00000540017 KYAT3Q6YP21 454 aaKnown RBP18.4■□□□□ 0.54
SNRPA1-203ENST00000540017 DPPA4Q7L190 304 aa18.4■□□□□ 0.54
SNRPA1-203ENST00000540017 GATAD2AQ86YP4 633 aa18.4■□□□□ 0.54
SNRPA1-203ENST00000540017 PAF1Q8N7H5 531 aa18.4■□□□□ 0.54
SNRPA1-203ENST00000540017 TP53I13Q8NBR0 393 aaPredicted RBP18.4■□□□□ 0.54
SNRPA1-203ENST00000540017 HAUS1Q96CS2 278 aa18.4■□□□□ 0.54
SNRPA1-203ENST00000540017 SMIM14Q96QK8 99 aa18.4■□□□□ 0.54
SNRPA1-203ENST00000540017 ERVMER34-1Q9H9K5 563 aa18.4■□□□□ 0.54
SNRPA1-203ENST00000540017 GPR27Q9NS67 375 aa18.4■□□□□ 0.54
SNRPA1-203ENST00000540017 B4GALT6Q9UBX8 382 aa18.4■□□□□ 0.54
SNRPA1-203ENST00000540017 AMACRQ9UHK6 382 aa18.4■□□□□ 0.54
SNRPA1-203ENST00000540017 PACSIN2Q9UNF0 486 aaPredicted RBP18.4■□□□□ 0.54
SNRPA1-203ENST00000540017 PCDHGB2Q9Y5G2 931 aa18.4■□□□□ 0.54
SNRPA1-203ENST00000540017 RAI2Q9Y5P3 530 aa18.4■□□□□ 0.54
SNRPA1-203ENST00000540017 CAPN6Q9Y6Q1 641 aa18.4■□□□□ 0.54
SNRPA1-203ENST00000540017 CABIN1Q9Y6J0 2220 aa18.39■□□□□ 0.54
SNRPA1-203ENST00000540017 CCDC66A2RUB6 948 aa18.39■□□□□ 0.53
SNRPA1-203ENST00000540017 ARHGAP6O43182 974 aa18.39■□□□□ 0.53
SNRPA1-203ENST00000540017 PCDHGA12O60330 932 aa18.39■□□□□ 0.53
SNRPA1-203ENST00000540017 FZD6O60353 706 aa18.39■□□□□ 0.53
SNRPA1-203ENST00000540017 DFNA5O60443 496 aa18.39■□□□□ 0.53
SNRPA1-203ENST00000540017 MAGEC1O60732 1142 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms