RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 NYAP1Q6ZVC0 841 aa16.9■□□□□ 0.3
DDB1-215ENST00000539712 RBFAQ8N0V3 343 aa16.9■□□□□ 0.3
DDB1-215ENST00000539712 PDCD7Q8N8D1 485 aaKnown RBP16.9■□□□□ 0.3
DDB1-215ENST00000539712 SPOCK2Q92563 424 aa16.9■□□□□ 0.3
DDB1-215ENST00000539712 APOLD1Q96LR9 279 aa16.9■□□□□ 0.3
DDB1-215ENST00000539712 ZNF599Q96NL3 588 aa16.9■□□□□ 0.3
DDB1-215ENST00000539712 CINPQ9BW66 212 aaPredicted RBP16.9■□□□□ 0.3
DDB1-215ENST00000539712 PACSIN1Q9BY11 444 aa16.9■□□□□ 0.3
DDB1-215ENST00000539712 ATP13A3Q9H7F0 1226 aa16.9■□□□□ 0.3
DDB1-215ENST00000539712 SEPT3Q9UH03 358 aa16.9■□□□□ 0.3
DDB1-215ENST00000539712 ATP8A1Q9Y2Q0 1164 aa16.9■□□□□ 0.3
DDB1-215ENST00000539712 CSNK1G3Q9Y6M4 447 aa16.9■□□□□ 0.3
DDB1-215ENST00000539712 URB1O60287 2271 aaKnown RBP16.9■□□□□ 0.3
DDB1-215ENST00000539712 MYO1FO00160 1098 aa16.89■□□□□ 0.29
DDB1-215ENST00000539712 GCATO75600 419 aa16.89■□□□□ 0.29
DDB1-215ENST00000539712 JUPP14923 745 aa16.89■□□□□ 0.29
DDB1-215ENST00000539712 JUNDP17535 347 aa16.89■□□□□ 0.29
DDB1-215ENST00000539712 SERPINA4P29622 427 aa16.89■□□□□ 0.29
DDB1-215ENST00000539712 SCNN1BP51168 640 aa16.89■□□□□ 0.29
DDB1-215ENST00000539712 TMCO4Q5TGY1 634 aa16.89■□□□□ 0.29
DDB1-215ENST00000539712 TMCO3Q6UWJ1 677 aa16.89■□□□□ 0.29
DDB1-215ENST00000539712 CACTIN-AS1Q8N1I8 211 aa16.89■□□□□ 0.29
DDB1-215ENST00000539712 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.89■□□□□ 0.29
DDB1-215ENST00000539712 ANKRD36A6QL64 1941 aa16.89■□□□□ 0.29
DDB1-215ENST00000539712 MYLKQ15746 1914 aa16.89■□□□□ 0.29
DDB1-215ENST00000539712 CFAP69A5D8W1 941 aa16.88■□□□□ 0.29
DDB1-215ENST00000539712 NEMP2A6NFY4 417 aa16.88■□□□□ 0.29
DDB1-215ENST00000539712 HTRA2O43464 458 aaPredicted RBP16.88■□□□□ 0.29
DDB1-215ENST00000539712 XPAP23025 273 aaPredicted RBP16.88■□□□□ 0.29
DDB1-215ENST00000539712 TAS2R40P59535 323 aa16.88■□□□□ 0.29
DDB1-215ENST00000539712 AP1S1P61966 158 aa16.88■□□□□ 0.29
DDB1-215ENST00000539712 BCL2L1Q07817 233 aa16.88■□□□□ 0.29
DDB1-215ENST00000539712 LRRC14Q15048 493 aa16.88■□□□□ 0.29
DDB1-215ENST00000539712 SLC18A3Q16572 532 aa16.88■□□□□ 0.29
DDB1-215ENST00000539712 KCTD16Q68DU8 428 aa16.88■□□□□ 0.29
DDB1-215ENST00000539712 SPECC1LQ69YQ0 1117 aa16.88■□□□□ 0.29
DDB1-215ENST00000539712 DCBLD1Q8N8Z6 715 aa16.88■□□□□ 0.29
DDB1-215ENST00000539712 OR8K1Q8NGG5 319 aa16.88■□□□□ 0.29
DDB1-215ENST00000539712 ZNF564Q8TBZ8 553 aaPredicted RBP16.88■□□□□ 0.29
DDB1-215ENST00000539712 FUBP1Q96AE4 644 aaKnown RBP16.88■□□□□ 0.29
DDB1-215ENST00000539712 C1QTNF7Q9BXJ2 289 aa16.88■□□□□ 0.29
DDB1-215ENST00000539712 CLPBQ9H078 707 aa16.88■□□□□ 0.29
DDB1-215ENST00000539712 RCOR3Q9P2K3 495 aaPredicted RBP16.88■□□□□ 0.29
DDB1-215ENST00000539712 RAXQ9Y2V3 346 aa16.88■□□□□ 0.29
DDB1-215ENST00000539712 IGSF10Q6WRI0 2623 aa16.87■□□□□ 0.29
DDB1-215ENST00000539712 TOR1BO14657 336 aa16.87■□□□□ 0.29
DDB1-215ENST00000539712 AQP9O43315 295 aa16.87■□□□□ 0.29
DDB1-215ENST00000539712 PROSCO94903 275 aa16.87■□□□□ 0.29
DDB1-215ENST00000539712 PEX5P50542 639 aa16.87■□□□□ 0.29
DDB1-215ENST00000539712 THOP1P52888 689 aa16.87■□□□□ 0.29
DDB1-215ENST00000539712 CDH6P55285 790 aa16.87■□□□□ 0.29
DDB1-215ENST00000539712 DPYSL3Q14195 570 aa16.87■□□□□ 0.29
DDB1-215ENST00000539712 PTK2BQ14289 1009 aa16.87■□□□□ 0.29
DDB1-215ENST00000539712 IHHQ14623 411 aa16.87■□□□□ 0.29
DDB1-215ENST00000539712 INPP5AQ14642 412 aa16.87■□□□□ 0.29
DDB1-215ENST00000539712 CDCP2Q5VXM1 449 aa16.87■□□□□ 0.29
DDB1-215ENST00000539712 ERAP2Q6P179 960 aa16.87■□□□□ 0.29
DDB1-215ENST00000539712 LIPIQ6XZB0 460 aa16.87■□□□□ 0.29
DDB1-215ENST00000539712 MACC1Q6ZN28 852 aa16.87■□□□□ 0.29
DDB1-215ENST00000539712 VSTM4Q8IW00 320 aa16.87■□□□□ 0.29
DDB1-215ENST00000539712 PHACTR4Q8IZ21 702 aa16.87■□□□□ 0.29
DDB1-215ENST00000539712 CBARPQ8N350 705 aaPredicted RBP16.87■□□□□ 0.29
DDB1-215ENST00000539712 PLA2G15Q8NCC3 412 aa16.87■□□□□ 0.29
DDB1-215ENST00000539712 PCDH19Q8TAB3 1148 aa16.87■□□□□ 0.29
DDB1-215ENST00000539712 LMX1AQ8TE12 382 aa16.87■□□□□ 0.29
DDB1-215ENST00000539712 CHP1Q99653 195 aa16.87■□□□□ 0.29
DDB1-215ENST00000539712 MGME1Q9BQP7 344 aa16.87■□□□□ 0.29
DDB1-215ENST00000539712 LRRC61Q9BV99 259 aa16.87■□□□□ 0.29
DDB1-215ENST00000539712 DUSP23Q9BVJ7 150 aa16.87■□□□□ 0.29
DDB1-215ENST00000539712 NOD2Q9HC29 1040 aa16.87■□□□□ 0.29
DDB1-215ENST00000539712 GPSM3Q9Y4H4 160 aa16.87■□□□□ 0.29
DDB1-215ENST00000539712 PCDHGC4Q9Y5F7 938 aa16.87■□□□□ 0.29
DDB1-215ENST00000539712 H3BM21 787 aa16.86■□□□□ 0.29
DDB1-215ENST00000539712 TPP1O14773 563 aa16.86■□□□□ 0.29
DDB1-215ENST00000539712 RECQL5O94762 991 aaPredicted RBP16.86■□□□□ 0.29
DDB1-215ENST00000539712 CELA2BP08218 269 aaPredicted RBP16.86■□□□□ 0.29
DDB1-215ENST00000539712 HNF1BP35680 557 aa16.86■□□□□ 0.29
DDB1-215ENST00000539712 RENBPP51606 427 aa16.86■□□□□ 0.29
DDB1-215ENST00000539712 DAB2P98082 770 aa16.86■□□□□ 0.29
DDB1-215ENST00000539712 E2F1Q01094 437 aa16.86■□□□□ 0.29
DDB1-215ENST00000539712 C1orf61Q13536 156 aa16.86■□□□□ 0.29
DDB1-215ENST00000539712 DEFB133Q30KQ1 61 aa16.86■□□□□ 0.29
DDB1-215ENST00000539712 CFAP58Q5T655 872 aa16.86■□□□□ 0.29
DDB1-215ENST00000539712 DPPA4Q7L190 304 aa16.86■□□□□ 0.29
DDB1-215ENST00000539712 PELI3Q8N2H9 469 aa16.86■□□□□ 0.29
DDB1-215ENST00000539712 TEX26Q8N6G2 289 aa16.86■□□□□ 0.29
DDB1-215ENST00000539712 TBATAQ96M53 351 aa16.86■□□□□ 0.29
DDB1-215ENST00000539712 NUDCD1Q96RS6 583 aa16.86■□□□□ 0.29
DDB1-215ENST00000539712 APOOQ9BUR5 198 aa16.86■□□□□ 0.29
DDB1-215ENST00000539712 BOCQ9BWV1 1114 aa16.86■□□□□ 0.29
DDB1-215ENST00000539712 UVRAGQ9P2Y5 699 aa16.86■□□□□ 0.29
DDB1-215ENST00000539712 OR1A2Q9Y585 309 aa16.86■□□□□ 0.29
DDB1-215ENST00000539712 BPTFQ12830 3046 aa16.86■□□□□ 0.29
DDB1-215ENST00000539712 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.85■□□□□ 0.29
DDB1-215ENST00000539712 SSU72P8A0A1W2PR75 194 aa16.85■□□□□ 0.29
DDB1-215ENST00000539712 A8MX80 341 aa16.85■□□□□ 0.29
DDB1-215ENST00000539712 LMO7DNF2Z398 122 aa16.85■□□□□ 0.29
DDB1-215ENST00000539712 MFSD11O43934 449 aa16.85■□□□□ 0.29
DDB1-215ENST00000539712 OPA1O60313 960 aa16.85■□□□□ 0.29
DDB1-215ENST00000539712 TPM3P06753 285 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms