RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 SCHIP1Q9P0W5 487 aaPredicted RBP18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 MAGED2Q9UNF1 606 aaPredicted RBP18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 PARP14Q460N5 1801 aa18.71■□□□□ 0.59
SFSWAP-207ENST00000538548 NME4O00746 187 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 PGK1P00558 417 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 ATP5F1P24539 256 aaPredicted RBP18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 MAPK10P53779 464 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 DDIASQ8IXT1 998 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 HDAC10Q969S8 669 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 ZNF641Q96N77 438 aaPredicted RBP18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 ALPK1Q96QP1 1244 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 EML4Q9HC35 981 aaKnown RBP18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 CENPFP49454 3210 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 BBIP1A8MTZ0 92 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 HSD17B1P14061 328 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 NMBRP28336 390 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 POLR2IP36954 125 aaKnown RBP18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 SCNN1AP37088 669 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 YAP1P46937 504 aaKnown RBP18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 POLD2P49005 469 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 MLLT10P55197 1068 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 PAFAH1B3Q15102 231 aaKnown RBP18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 UGP2Q16851 508 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 PRMT9Q6P2P2 845 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 ACOT1Q86TX2 421 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 ADGRG5Q8IZF4 528 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 SNX31Q8N9S9 440 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 TRPV3Q8NET8 790 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 ZC3H15Q8WU90 426 aaKnown RBP18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 NRBF2Q96F24 287 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 GLT1D1Q96MS3 346 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 HOPXQ9BPY8 73 aaPredicted RBP18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 PSD2Q9BQI7 771 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 RAD21L1Q9H4I0 556 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 FANCEQ9HB96 536 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 SETD4Q9NVD3 440 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 ACTR3BQ9P1U1 418 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 ZNF214Q9UL59 606 aaPredicted RBP18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 COL11A1P12107 1806 aaPredicted RBP18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 FARP2O94887 1054 aaPredicted RBP18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 STAU1O95793 577 aaKnown RBP18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 AHSGP02765 367 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 CYP2C8P10632 490 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 STMN1P16949 149 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 CYP2B6P20813 491 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 UBA1P22314 1058 aaKnown RBP18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 RPS9P46781 194 aaKnown RBP18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 ATP4BP51164 291 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 ZNF460Q14592 562 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 SLC2A7Q6PXP3 512 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 DLK2Q6UY11 383 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 TMCO5AQ8N6Q1 288 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 FAM167AQ96KS9 214 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 ACAD9Q9H845 621 aa18.7■□□□□ 0.58
SFSWAP-207ENST00000538548 CCDC78A2IDD5 438 aa18.69■□□□□ 0.58
SFSWAP-207ENST00000538548 RBP5P82980 135 aa18.69■□□□□ 0.58
SFSWAP-207ENST00000538548 PRPSAP1Q14558 356 aa18.69■□□□□ 0.58
SFSWAP-207ENST00000538548 RETREG3Q86VR2 466 aa18.69■□□□□ 0.58
SFSWAP-207ENST00000538548 SFRP1Q8N474 314 aa18.69■□□□□ 0.58
SFSWAP-207ENST00000538548 SPATA6LQ8N4H0 392 aa18.69■□□□□ 0.58
SFSWAP-207ENST00000538548 SNX19Q92543 992 aa18.69■□□□□ 0.58
SFSWAP-207ENST00000538548 EFHD2Q96C19 240 aaPredicted RBP18.69■□□□□ 0.58
SFSWAP-207ENST00000538548 ZNF668Q96K58 619 aaPredicted RBP18.69■□□□□ 0.58
SFSWAP-207ENST00000538548 TSPYL2Q9H2G4 693 aaPredicted RBP18.69■□□□□ 0.58
SFSWAP-207ENST00000538548 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.69■□□□□ 0.581e-6■□□□□ 8.4
SFSWAP-207ENST00000538548 IGKV6-21A0A0C4DH24 114 aa18.69■□□□□ 0.58
SFSWAP-207ENST00000538548 TTC24A2A3L6 582 aaPredicted RBP18.69■□□□□ 0.58
SFSWAP-207ENST00000538548 KDM1AO60341 852 aa18.69■□□□□ 0.58
SFSWAP-207ENST00000538548 GPIP06744 558 aa18.69■□□□□ 0.58
SFSWAP-207ENST00000538548 OXTRP30559 389 aa18.69■□□□□ 0.58
SFSWAP-207ENST00000538548 KPNA2P52292 529 aaKnown RBP18.69■□□□□ 0.58
SFSWAP-207ENST00000538548 ZNF846Q147U1 533 aa18.69■□□□□ 0.58
SFSWAP-207ENST00000538548 TMEM132DQ14C87 1099 aa18.69■□□□□ 0.58
SFSWAP-207ENST00000538548 ZNF618Q5T7W0 954 aa18.69■□□□□ 0.58
SFSWAP-207ENST00000538548 CUZD1Q86UP6 607 aa18.69■□□□□ 0.58
SFSWAP-207ENST00000538548 CEP97Q8IW35 865 aa18.69■□□□□ 0.58
SFSWAP-207ENST00000538548 MINDY2Q8NBR6 621 aa18.69■□□□□ 0.58
SFSWAP-207ENST00000538548 MLPHQ9BV36 600 aaPredicted RBP18.69■□□□□ 0.58
SFSWAP-207ENST00000538548 MYOZ2Q9NPC6 264 aa18.69■□□□□ 0.58
SFSWAP-207ENST00000538548 EGFL7Q9UHF1 273 aa18.69■□□□□ 0.58
SFSWAP-207ENST00000538548 TMEM98Q9Y2Y6 226 aa18.69■□□□□ 0.58
SFSWAP-207ENST00000538548 CLDN25C9JDP6 229 aa18.68■□□□□ 0.58
SFSWAP-207ENST00000538548 PABPC1P11940 636 aaKnown RBP18.68■□□□□ 0.58
SFSWAP-207ENST00000538548 S100A1P23297 94 aa18.68■□□□□ 0.58
SFSWAP-207ENST00000538548 IDUAP35475 653 aa18.68■□□□□ 0.58
SFSWAP-207ENST00000538548 KPNA1P52294 538 aaPredicted RBP18.68■□□□□ 0.58
SFSWAP-207ENST00000538548 STX1BP61266 288 aa18.68■□□□□ 0.58
SFSWAP-207ENST00000538548 PLCL1Q15111 1095 aa18.68■□□□□ 0.58
SFSWAP-207ENST00000538548 BROXQ5VW32 411 aa18.68■□□□□ 0.58
SFSWAP-207ENST00000538548 FUNDC1Q8IVP5 155 aa18.68■□□□□ 0.58
SFSWAP-207ENST00000538548 TP53INP2Q8IXH6 220 aa18.68■□□□□ 0.58
SFSWAP-207ENST00000538548 ABHD11Q8NFV4 315 aa18.68■□□□□ 0.58
SFSWAP-207ENST00000538548 USP33Q8TEY7 942 aa18.68■□□□□ 0.58
SFSWAP-207ENST00000538548 TNFRSF12AQ9NP84 129 aa18.68■□□□□ 0.58
SFSWAP-207ENST00000538548 PSME4Q14997 1843 aa18.68■□□□□ 0.58
SFSWAP-207ENST00000538548 EEF1B2P24534 225 aaKnown RBP18.68■□□□□ 0.58
SFSWAP-207ENST00000538548 GJA9P57773 515 aa18.68■□□□□ 0.58
SFSWAP-207ENST00000538548 ADARB1P78563 741 aaKnown RBP18.68■□□□□ 0.58
SFSWAP-207ENST00000538548 MBTD1Q05BQ5 628 aa18.68■□□□□ 0.58
SFSWAP-207ENST00000538548 BFSP2Q13515 415 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms