RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 PDGFBP01127 241 aaPredicted RBP19.16■□□□□ 0.66
SMPD1-205ENST00000531303 FGF1P05230 155 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 ALPIP09923 528 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 MLNP12872 115 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 ABL2P42684 1182 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 SATB1Q01826 763 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 SIGLEC14Q08ET2 396 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 POU6F1Q14863 301 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 HSF5Q4G112 596 aaPredicted RBP19.16■□□□□ 0.66
SMPD1-205ENST00000531303 CCDC38Q502W7 563 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 DNAJC21Q5F1R6 531 aaKnown RBP19.16■□□□□ 0.66
SMPD1-205ENST00000531303 CASC4Q6P4E1 433 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 PJA1Q8NG27 643 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 BLOC1S5Q8TDH9 187 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 EDAQ92838 391 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 ARRDC3Q96B67 414 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 FRMD8Q9BZ67 464 aaPredicted RBP19.16■□□□□ 0.66
SMPD1-205ENST00000531303 RSPH9Q9H1X1 276 aaPredicted RBP19.16■□□□□ 0.66
SMPD1-205ENST00000531303 SYBUQ9NX95 663 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 BFARQ9NZS9 450 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 MAD1L1Q9Y6D9 718 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 A0A0U1RQS6 177 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 CCDC78A2IDD5 438 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 C16orf96A6NNT2 1141 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 DCXO43602 365 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 PPFIA2O75334 1257 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 DCNP07585 359 aaKnown RBP19.16■□□□□ 0.66
SMPD1-205ENST00000531303 XPAP23025 273 aaPredicted RBP19.16■□□□□ 0.66
SMPD1-205ENST00000531303 COPAP53621 1224 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 SEPT6Q14141 434 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 GAS6Q14393 721 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 ZNF776Q68DI1 518 aaPredicted RBP19.16■□□□□ 0.66
SMPD1-205ENST00000531303 TTC7BQ86TV6 843 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 AGGF1Q8N302 714 aaeCLIP19.16■□□□□ 0.66
SMPD1-205ENST00000531303 EIF1ADQ8N9N8 165 aaKnown RBP19.16■□□□□ 0.66
SMPD1-205ENST00000531303 ECHDC3Q96DC8 303 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 FOXP3Q9BZS1 431 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 MKRN2Q9H000 416 aaKnown RBP19.16■□□□□ 0.66
SMPD1-205ENST00000531303 ARNT2Q9HBZ2 717 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 DYRK4Q9NR20 520 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 C2orf42Q9NWW7 574 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 SIT1Q9Y3P8 196 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 TCRBV21S2A2A0A5A6 115 aa19.15■□□□□ 0.66
SMPD1-205ENST00000531303 SDR42E2A6NKP2 422 aa19.15■□□□□ 0.66
SMPD1-205ENST00000531303 MID1O15344 667 aa19.15■□□□□ 0.66
SMPD1-205ENST00000531303 SLC4A1P02730 911 aa19.15■□□□□ 0.66
SMPD1-205ENST00000531303 TIMP2P16035 220 aa19.15■□□□□ 0.66
SMPD1-205ENST00000531303 ELK3P41970 407 aa19.15■□□□□ 0.66
SMPD1-205ENST00000531303 NPY2RP49146 381 aa19.15■□□□□ 0.66
SMPD1-205ENST00000531303 RPL26P61254 145 aaKnown RBP19.15■□□□□ 0.66
SMPD1-205ENST00000531303 RPS14P62263 151 aaKnown RBP19.15■□□□□ 0.66
SMPD1-205ENST00000531303 FASTKD3Q14CZ7 662 aaKnown RBP19.15■□□□□ 0.66
SMPD1-205ENST00000531303 CST6Q15828 149 aa19.15■□□□□ 0.66
SMPD1-205ENST00000531303 CRY1Q16526 586 aa19.15■□□□□ 0.66
SMPD1-205ENST00000531303 FAM46CQ5VWP2 391 aa19.15■□□□□ 0.66
SMPD1-205ENST00000531303 BRAT1Q6PJG6 821 aa19.15■□□□□ 0.66
SMPD1-205ENST00000531303 PARS2Q7L3T8 475 aaKnown RBP19.15■□□□□ 0.66
SMPD1-205ENST00000531303 TMPRSS6Q8IU80 811 aa19.15■□□□□ 0.66
SMPD1-205ENST00000531303 IGDCC3Q8IVU1 814 aa19.15■□□□□ 0.66
SMPD1-205ENST00000531303 ZBED8Q8IZ13 594 aa19.15■□□□□ 0.66
SMPD1-205ENST00000531303 GANCQ8TET4 914 aa19.15■□□□□ 0.66
SMPD1-205ENST00000531303 PHTF1Q9UMS5 762 aa19.15■□□□□ 0.66
SMPD1-205ENST00000531303 RPL26L1Q9UNX3 145 aaKnown RBP19.15■□□□□ 0.66
SMPD1-205ENST00000531303 CHMP2BQ9UQN3 213 aa19.15■□□□□ 0.66
SMPD1-205ENST00000531303 SPO11Q9Y5K1 396 aa19.15■□□□□ 0.66
SMPD1-205ENST00000531303 AP3B1O00203 1094 aa19.14■□□□□ 0.65
SMPD1-205ENST00000531303 ATG13O75143 517 aa19.14■□□□□ 0.65
SMPD1-205ENST00000531303 ALADP13716 330 aa19.14■□□□□ 0.65
SMPD1-205ENST00000531303 MAGEA3P43357 314 aa19.14■□□□□ 0.65
SMPD1-205ENST00000531303 GRIA4P48058 902 aa19.14■□□□□ 0.65
SMPD1-205ENST00000531303 POLR2LP62875 67 aaKnown RBP19.14■□□□□ 0.65
SMPD1-205ENST00000531303 FAM193AP78312 1265 aa19.14■□□□□ 0.65
SMPD1-205ENST00000531303 UGP2Q16851 508 aa19.14■□□□□ 0.65
SMPD1-205ENST00000531303 FBXL19Q6PCT2 694 aa19.14■□□□□ 0.65
SMPD1-205ENST00000531303 AENQ8WTP8 325 aaKnown RBP19.14■□□□□ 0.65
SMPD1-205ENST00000531303 HMGB4Q8WW32 186 aa19.14■□□□□ 0.65
SMPD1-205ENST00000531303 CFAP36Q96G28 342 aa19.14■□□□□ 0.65
SMPD1-205ENST00000531303 PPP1R16AQ96I34 528 aa19.14■□□□□ 0.65
SMPD1-205ENST00000531303 SIGLEC10Q96LC7 697 aa19.14■□□□□ 0.65
SMPD1-205ENST00000531303 C9orf72Q96LT7 481 aa19.14■□□□□ 0.65
SMPD1-205ENST00000531303 TRIM56Q9BRZ2 755 aaKnown RBP19.14■□□□□ 0.65
SMPD1-205ENST00000531303 DKK3Q9UBP4 350 aa19.14■□□□□ 0.65
SMPD1-205ENST00000531303 TECTAO75443 2155 aa19.13■□□□□ 0.65
SMPD1-205ENST00000531303 CHURC1-FNTBB4DL54 471 aa19.13■□□□□ 0.65
SMPD1-205ENST00000531303 ITGB7P26010 798 aa19.13■□□□□ 0.65
SMPD1-205ENST00000531303 HNF1BP35680 557 aa19.13■□□□□ 0.65
SMPD1-205ENST00000531303 MAGEA4P43358 317 aa19.13■□□□□ 0.65
SMPD1-205ENST00000531303 BRD3Q15059 726 aa19.13■□□□□ 0.65
SMPD1-205ENST00000531303 CES3Q6UWW8 571 aa19.13■□□□□ 0.65
SMPD1-205ENST00000531303 KIAA1324Q6UXG2 1013 aaKnown RBP19.13■□□□□ 0.65
SMPD1-205ENST00000531303 CAPN12Q6ZSI9 719 aa19.13■□□□□ 0.65
SMPD1-205ENST00000531303 NDUFAF2Q8N183 169 aa19.13■□□□□ 0.65
SMPD1-205ENST00000531303 PGBD3Q8N328 593 aa19.13■□□□□ 0.65
SMPD1-205ENST00000531303 HDDC3Q8N4P3 179 aa19.13■□□□□ 0.65
SMPD1-205ENST00000531303 FBXO36Q8NEA4 188 aa19.13■□□□□ 0.65
SMPD1-205ENST00000531303 STAMBPL1Q96FJ0 436 aa19.13■□□□□ 0.65
SMPD1-205ENST00000531303 TSPYL1Q9H0U9 437 aa19.13■□□□□ 0.65
SMPD1-205ENST00000531303 CD248Q9HCU0 757 aa19.13■□□□□ 0.65
SMPD1-205ENST00000531303 PCDH12Q9NPG4 1184 aa19.13■□□□□ 0.65
SMPD1-205ENST00000531303 SAMD15Q9P1V8 674 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms